BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0880800 Os01g0880800|AK120809
(381 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0880800 Similar to Acyl-[acyl-carrier-protein] desatur... 701 0.0
Os04g0379900 Similar to Acyl-[acyl-carrier-protein] desatur... 489 e-138
Os01g0919900 Similar to Acyl-[acyl-carrier-protein] desatur... 473 e-133
Os08g0200100 Fatty acid desaturase, type 2 family protein 383 e-106
Os03g0423300 Similar to Stearoyl-acyl carrier protein desat... 360 1e-99
Os08g0199400 Similar to Stearoyl-acyl carrier protein desat... 347 1e-95
Os02g0504800 Similar to Delta-9 stearoyl-acyl carrier prote... 304 7e-83
Os03g0741000 148 6e-36
Os06g0503800 135 6e-32
>Os01g0880800 Similar to Acyl-[acyl-carrier-protein] desaturase, chloroplast
precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase)
Length = 381
Score = 701 bits (1808), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/381 (89%), Positives = 342/381 (89%)
Query: 1 MQVVGTVRVSGCGAVVAPSRRQCRXXXXXXXXXXXXXXXXXXXXHSMPPEKAEVFRSLEG 60
MQVVGTVRVSGCGAVVAPSRRQCR HSMPPEKAEVFRSLEG
Sbjct: 1 MQVVGTVRVSGCGAVVAPSRRQCRVSAAVLTAAETATATRRRVTHSMPPEKAEVFRSLEG 60
Query: 61 WARSSLLPLLKPVEECWQPTDFLPDSSSEMFEHQVHELRARAAGLPDEYFVVLVGDMITE 120
WARSSLLPLLKPVEECWQPTDFLPDSSSEMFEHQVHELRARAAGLPDEYFVVLVGDMITE
Sbjct: 61 WARSSLLPLLKPVEECWQPTDFLPDSSSEMFEHQVHELRARAAGLPDEYFVVLVGDMITE 120
Query: 121 EALPTYQTMINTLDGVRDETGASACPWAVWTRTWTAEENRHGDILGKYMYLSGRVDMRMV 180
EALPTYQTMINTLDGVRDETGASACPWAVWTRTWTAEENRHGDILGKYMYLSGRVDMRMV
Sbjct: 121 EALPTYQTMINTLDGVRDETGASACPWAVWTRTWTAEENRHGDILGKYMYLSGRVDMRMV 180
Query: 181 EKTVQYLIGSGMDPGTENNPYLGFVYTSFQERATAVSHGNTARLARAHGDDVLARTCGTI 240
EKTVQYLIGSGMDPGTENNPYLGFVYTSFQERATAVSHGNTARLARAHGDDVLARTCGTI
Sbjct: 181 EKTVQYLIGSGMDPGTENNPYLGFVYTSFQERATAVSHGNTARLARAHGDDVLARTCGTI 240
Query: 241 AADEKRHETAYGRIVEQLLRLDPDGAMLAIADMMHKRITMPAHLMHDGRDMNLFDHFAAV 300
AADEKRHETAYGRIVEQLLRLDPDGAMLAIADMMHKRITMPAHLMHDGRDMNLFDHFAAV
Sbjct: 241 AADEKRHETAYGRIVEQLLRLDPDGAMLAIADMMHKRITMPAHLMHDGRDMNLFDHFAAV 300
Query: 301 AQRLNVYTARDYADIVEFLVKRWKLETLETGLSGEGRRARDFVCGLXXXXXXXXXXXXXX 360
AQRLNVYTARDYADIVEFLVKRWKLETLETGLSGEGRRARDFVCGL
Sbjct: 301 AQRLNVYTARDYADIVEFLVKRWKLETLETGLSGEGRRARDFVCGLAKRMRRAAERAEDR 360
Query: 361 XXXXXQRKVKFSWIYDREVIV 381
QRKVKFSWIYDREVIV
Sbjct: 361 AKKDEQRKVKFSWIYDREVIV 381
>Os04g0379900 Similar to Acyl-[acyl-carrier-protein] desaturase, chloroplast
precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase)
Length = 390
Score = 489 bits (1259), Expect = e-138, Method: Compositional matrix adjust.
Identities = 231/335 (68%), Positives = 271/335 (80%), Gaps = 3/335 (0%)
Query: 45 HSMPPEKAEVFRSLEGWARSSLLPLLKPVEECWQPTDFLPDSSSEMFEHQVHELRARAAG 104
HS+PP+K E+F SL+ WA+ +LL LLKPVE+ WQP DFLPD SS+ F +V ELR RA
Sbjct: 57 HSLPPQKREIFDSLQPWAKENLLNLLKPVEKSWQPQDFLPDPSSDGFYDEVKELRERAKE 116
Query: 105 LPDEYFVVLVGDMITEEALPTYQTMINTLDGVRDETGASACPWAVWTRTWTAEENRHGDI 164
+PD+YFV LVGDM+TEEALPTYQTM+NTLDGVRDETGAS WAVWTR WTAEENRHGD+
Sbjct: 117 IPDDYFVCLVGDMVTEEALPTYQTMLNTLDGVRDETGASPTTWAVWTRAWTAEENRHGDL 176
Query: 165 LGKYMYLSGRVDMRMVEKTVQYLIGSGMDPGTENNPYLGFVYTSFQERATAVSHGNTARL 224
L KYMYL+GRVDM+ +EKT+QYLIGSGMDPGTENNPYLGF+YTSFQERAT +SHGNTAR
Sbjct: 177 LNKYMYLTGRVDMKQIEKTIQYLIGSGMDPGTENNPYLGFLYTSFQERATFISHGNTARH 236
Query: 225 ARAHGDDVLARTCGTIAADEKRHETAYGRIVEQLLRLDPDGAMLAIADMMHKRITMPAHL 284
A+ +GD LA+ CGTIAADEKRHETAY +IVE+L +DPD +LA ADMM K+I+MPAHL
Sbjct: 237 AKEYGDLKLAQICGTIAADEKRHETAYTKIVEKLFEIDPDYTVLAFADMMRKKISMPAHL 296
Query: 285 MHDGRDMNLFDHFAAVAQRLNVYTARDYADIVEFLVKRWKLETLETGLSGEGRRARDFVC 344
M+DG+D NLF+HF+AVAQRL VYTARDYADI+EFLV+RWK+ L TGLSGEGRRA+DFVC
Sbjct: 297 MYDGKDDNLFEHFSAVAQRLGVYTARDYADILEFLVQRWKVADL-TGLSGEGRRAQDFVC 355
Query: 345 GLXXXXXXXXXXXXXXXXXXXQRKVKFSWIYDREV 379
L + FSW+YDR+V
Sbjct: 356 TLAPRIRRLDERAQARAKQAPV--IPFSWVYDRKV 388
>Os01g0919900 Similar to Acyl-[acyl-carrier-protein] desaturase, chloroplast
precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase)
(Delta(9) stearoyl-acyl carrier protein desaturase)
Length = 400
Score = 473 bits (1217), Expect = e-133, Method: Compositional matrix adjust.
Identities = 222/335 (66%), Positives = 262/335 (78%), Gaps = 3/335 (0%)
Query: 45 HSMPPEKAEVFRSLEGWARSSLLPLLKPVEECWQPTDFLPDSSSEMFEHQVHELRARAAG 104
HSMPP+K E+F+SL+ WAR ++L LKPVE+CWQP DFLPD +S+ F +V ELR RA
Sbjct: 67 HSMPPQKIEIFKSLDDWARDNILSHLKPVEKCWQPQDFLPDPASDGFHDEVKELRERAKE 126
Query: 105 LPDEYFVVLVGDMITEEALPTYQTMINTLDGVRDETGASACPWAVWTRTWTAEENRHGDI 164
+PD+YFV LVGDMITEEALPTYQTM+NTLDGVRDETGAS WAVWTR WTAEENRHGD+
Sbjct: 127 IPDDYFVCLVGDMITEEALPTYQTMLNTLDGVRDETGASPTAWAVWTRAWTAEENRHGDL 186
Query: 165 LGKYMYLSGRVDMRMVEKTVQYLIGSGMDPGTENNPYLGFVYTSFQERATAVSHGNTARL 224
L KY+YL+GRVDMR +EKT+QYLIGSGMDP TENNPYLGF+YTSFQERAT +SHGNTAR
Sbjct: 187 LNKYLYLTGRVDMRQIEKTIQYLIGSGMDPRTENNPYLGFIYTSFQERATFISHGNTARH 246
Query: 225 ARAHGDDVLARTCGTIAADEKRHETAYGRIVEQLLRLDPDGAMLAIADMMHKRITMPAHL 284
A+ GD LA+ CG IA+DEKRHETAY +IVE+L +DPDG +LA ADMM K+I+MPAHL
Sbjct: 247 AKDFGDLKLAQICGIIASDEKRHETAYTKIVEKLFEIDPDGTVLAFADMMKKKISMPAHL 306
Query: 285 MHDGRDMNLFDHFAAVAQRLNVYTARDYADIVEFLVKRWKLETLETGLSGEGRRARDFVC 344
M DG D LF+HF+ VAQRL VYTA+DYADI+EFLV RWK+ L TGLS EG +A+D++C
Sbjct: 307 MFDGEDDKLFEHFSMVAQRLGVYTAKDYADILEFLVSRWKISDL-TGLSSEGNKAQDYLC 365
Query: 345 GLXXXXXXXXXXXXXXXXXXXQRKVKFSWIYDREV 379
L + FSW+Y REV
Sbjct: 366 TLAARIRRLDERAQSRAKKAGT--LPFSWVYGREV 398
>Os08g0200100 Fatty acid desaturase, type 2 family protein
Length = 404
Score = 383 bits (984), Expect = e-106, Method: Compositional matrix adjust.
Identities = 189/338 (55%), Positives = 233/338 (68%), Gaps = 5/338 (1%)
Query: 47 MPPEKAEVFRSLEGWARSSLLPLLKPVEECWQPTDFLPDSSS---EMFEHQVHELRARAA 103
+ P + EV +E W + +LPLLKP EE WQP D +PD+++ + F ELR RAA
Sbjct: 62 LAPARLEVLEQMEPWVEAHVLPLLKPAEEAWQPADLVPDAAALGADGFHAACVELRGRAA 121
Query: 104 GLPDEYFVVLVGDMITEEALPTYQTMINTLDGVRDETGASACPWAVWTRTWTAEENRHGD 163
G+PD + V LVG+M+TEEALPTYQ+M N + RD TGA A WA W R W+AEENRHGD
Sbjct: 122 GVPDAHLVCLVGNMVTEEALPTYQSMANRFESARDVTGADATAWARWIRGWSAEENRHGD 181
Query: 164 ILGKYMYLSGRVDMRMVEKTVQYLIGSGMDPGTENNPYLGFVYTSFQERATAVSHGNTAR 223
+L +YMYLSGR+DMR VE+TV LIGSGM +PY GF+Y +FQERATA+SHGNTAR
Sbjct: 182 VLNRYMYLSGRLDMRQVERTVHRLIGSGMAMHAPASPYHGFIYVAFQERATAISHGNTAR 241
Query: 224 LARAHGDDVLARTCGTIAADEKRHETAYGRIVEQLLRLDPDGAMLAIADMMHKRITMPAH 283
RAHGDD LAR CG IA+DEKRHE AY R+VE+LL DPD + A+A MM +RITMPA
Sbjct: 242 NVRAHGDDALARICGAIASDEKRHEAAYTRVVERLLEADPDTTVRALAYMMRRRITMPAA 301
Query: 284 LMHDGRDMNLFDHFAAVAQRLNVYTARDYADIVEFLVKRWKLETLETGLSGEGRRARDFV 343
LM DGRD +LF H+AA AQ+ YTA DY I+E L++RW++ LE GLSGEGRRARD+V
Sbjct: 302 LMDDGRDADLFAHYAAAAQQAGTYTASDYRGILEHLIRRWRVAELEAGLSGEGRRARDYV 361
Query: 344 CGLXXXXXXXXXXXXXXXXXXXQR--KVKFSWIYDREV 379
C L +R + FSWI+D+ V
Sbjct: 362 CALPQKIRRMEEKAHDRAAQMRKRPTAIPFSWIFDKPV 399
>Os03g0423300 Similar to Stearoyl-acyl carrier protein desaturse (EC 1.14.99.6)
(Fragment)
Length = 418
Score = 360 bits (923), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 179/342 (52%), Positives = 225/342 (65%), Gaps = 10/342 (2%)
Query: 50 EKAEVFRSLEGWARSSLLPLLKPVEECWQPTDFLPDSSSEM------FEHQVHELRARAA 103
E+ E+ RSL W ++LPLL PV+ WQP DFLP S++ F V ELRA AA
Sbjct: 76 EQVEIARSLNAWVEENMLPLLTPVDSAWQPHDFLPCSAAGGGEALAAFTEGVAELRAGAA 135
Query: 104 GLPDEYFVVLVGDMITEEALPTYQTMINTLDGVRDETGASACPWAVWTRTWTAEENRHGD 163
G+PDE V LVG+M+TEEALPTYQ+M N +G+ D TG S PWA W R WTAEENRHGD
Sbjct: 136 GVPDEVLVCLVGNMVTEEALPTYQSMGNRAEGLADGTGVSPLPWARWLRGWTAEENRHGD 195
Query: 164 ILGKYMYLSGRVDMRMVEKTVQYLIGSGMDPGTENNPYLGFVYTSFQERATAVSHGNTAR 223
+L +Y+YLSGRVDMR VE TV L+ +GM+ +PY G +Y +FQERAT +SHG+TAR
Sbjct: 196 LLNRYLYLSGRVDMRQVEATVHRLLRNGMEMLAPASPYHGLIYGAFQERATFISHGHTAR 255
Query: 224 LARAHGDDVLARTCGTIAADEKRHETAYGRIVEQLLRLDPDGAMLAIADMMHKRITMPAH 283
LA HGD LA+ CG IAADE+RHE Y +L LDPDG A+AD+M ++TMP
Sbjct: 256 LAGQHGDRALAKICGVIAADERRHEAGYTMASGRLFELDPDGMARALADVMRGKVTMPGQ 315
Query: 284 LMHDGRD----MNLFDHFAAVAQRLNVYTARDYADIVEFLVKRWKLETLETGLSGEGRRA 339
LM DGRD +LF F+AVA+R VYTARDY D+VE V+RW++ L GLSGEGRRA
Sbjct: 316 LMSDGRDGDGEHSLFARFSAVAERAGVYTARDYGDLVEHFVRRWRVAELAAGLSGEGRRA 375
Query: 340 RDFVCGLXXXXXXXXXXXXXXXXXXXQRKVKFSWIYDREVIV 381
++++CGL +FSWI+DR V++
Sbjct: 376 QEYLCGLAPKIRRMEELAHRRAARIEPAMARFSWIFDRPVML 417
>Os08g0199400 Similar to Stearoyl-acyl carrier protein desaturse (EC 1.14.99.6)
(Fragment)
Length = 419
Score = 347 bits (889), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 176/342 (51%), Positives = 217/342 (63%), Gaps = 7/342 (2%)
Query: 47 MPPEKAEVFRSLEGWARSSLLPLLKPVEECWQPTDFLPDSS---SEMFEHQVHELRARAA 103
+ PEK EV +E W +LPLLKPVE WQP+D LPD + E F ELR RAA
Sbjct: 75 LSPEKLEVLTQMEPWVEEHVLPLLKPVEAAWQPSDLLPDPAVLGGEGFHAACAELRERAA 134
Query: 104 GLPDEYFVVLVGDMITEEALPTYQTMINTLDGVRDETGASACPWAVWTRTWTAEENRHGD 163
G+PD V LV +M+TEEALPTYQ+ +N + V D TGA A WA W R W+AEENRHGD
Sbjct: 135 GVPDLLLVCLVANMVTEEALPTYQSSLNRVRAVGDLTGADATAWARWIRGWSAEENRHGD 194
Query: 164 ILGKYMYLSGRVDMRMVEKTVQYLIGSGMDPGTENNPYLGFVYTSFQERATAVSHGNTAR 223
+L +YMYLSGR DM VE+ V LI SGM +PY FVYT+FQERATAV+HGNTAR
Sbjct: 195 VLNRYMYLSGRFDMAEVERAVHRLIRSGMAVDPPCSPYHAFVYTAFQERATAVAHGNTAR 254
Query: 224 L--ARAHGDDVLARTCGTIAADEKRHETAYGRIVEQLLRLDPDGAMLAIADMMHKRITMP 281
L AR HGD LAR CGT+AADEKRHE AY RIV +LL DPD + A+A M+ + + MP
Sbjct: 255 LVGARGHGDAALARVCGTVAADEKRHEAAYTRIVSRLLEADPDAGVRAVARMLRRGVAMP 314
Query: 282 AHLMHDGRDMNLFDHFAAVAQRLNVYTARDYADIVEFLVKRWKLETLETGLSGEGRRARD 341
+ DGR +L+ ++A++ YT DY IVE LV+ W++E L GLSGEGRRARD
Sbjct: 315 TSPISDGRRDDLYACVVSLAEQAGTYTVSDYCSIVEHLVREWRVEELAAGLSGEGRRARD 374
Query: 342 FVCGLXXXXXXXXXXXXXXXXXXXQR--KVKFSWIYDREVIV 381
+VC L ++ + +WI+DR V V
Sbjct: 375 YVCELPQKIRRMKEKAHERAVKAQKKPISIPINWIFDRHVSV 416
>Os02g0504800 Similar to Delta-9 stearoyl-acyl carrier protein desaturase (EC
1.14.99.6) (Fragment)
Length = 322
Score = 304 bits (778), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 141/198 (71%), Positives = 163/198 (82%), Gaps = 1/198 (0%)
Query: 45 HSMPPEKAEVFRSLEGWARSSLLPLLKPVEECWQPTDFLPDSSSEMFEHQVHELRARAAG 104
H++PPEK EVF SLEGWA ++LP LKPVEE WQP D LPD S F +V LR RAAG
Sbjct: 64 HTLPPEKKEVFDSLEGWAADTILPYLKPVEESWQPQDHLPDPRSPSFGDEVAALRERAAG 123
Query: 105 LPDEYFVVLVGDMITEEALPTYQTMINTLDG-VRDETGASACPWAVWTRTWTAEENRHGD 163
LPD++ V LVGDM+TEEALPTYQTM+NT+DG VRDETGA WAVWTR W AEENRHGD
Sbjct: 124 LPDDHLVCLVGDMVTEEALPTYQTMLNTMDGGVRDETGAGGSAWAVWTRAWAAEENRHGD 183
Query: 164 ILGKYMYLSGRVDMRMVEKTVQYLIGSGMDPGTENNPYLGFVYTSFQERATAVSHGNTAR 223
++ KY+YL+GRVDMR VEKT+QYLIGSGMDP TEN+PY+GF+YT+FQERAT++SHGNTAR
Sbjct: 184 LMNKYLYLTGRVDMRQVEKTIQYLIGSGMDPRTENDPYMGFIYTTFQERATSISHGNTAR 243
Query: 224 LARAHGDDVLARTCGTIA 241
A HGD LAR CGT+A
Sbjct: 244 HAGRHGDAALARVCGTVA 261
>Os03g0741000
Length = 192
Score = 148 bits (374), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 74/149 (49%), Positives = 94/149 (63%), Gaps = 14/149 (9%)
Query: 58 LEGWARSSLLPLLKPVEECWQPTDFLPDSSS---EMFEHQVHELRARAA----------- 103
+E W +L LLKP +E WQP D +PD+++ + F ELR AA
Sbjct: 1 MEPWVEQHVLLLLKPAKEAWQPEDMVPDAAALGADGFHAACLELRECAARRALSSGSALR 60
Query: 104 GLPDEYFVVLVGDMITEEALPTYQTMINTLDGVRDETGASACPWAVWTRTWTAEENRHGD 163
G+PD + V LVG+M+TEEALPTYQ+M+N + RD TGA WA W W+AEEN H D
Sbjct: 61 GVPDAHLVCLVGNMVTEEALPTYQSMVNRFESARDVTGADGTAWARWICRWSAEENHHDD 120
Query: 164 ILGKYMYLSGRVDMRMVEKTVQYLIGSGM 192
+L +YMYLSGR+DMR VE+TV LI SGM
Sbjct: 121 VLNRYMYLSGRLDMRQVERTVHRLISSGM 149
>Os06g0503800
Length = 158
Score = 135 bits (339), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 71/144 (49%), Positives = 85/144 (59%), Gaps = 22/144 (15%)
Query: 117 MITEEALPTYQTMINTLDGVRDETGASACPWAVWTRTWTAEENRHGDILGKYMYLSGRVD 176
M+ EEALPTYQ+M N + RD TGA WA W W+A+ENRHGD+L +YMYLSGR+D
Sbjct: 1 MVMEEALPTYQSMANRFESARDVTGADRMAWARWICRWSAKENRHGDVLNRYMYLSGRLD 60
Query: 177 MRMVEKTVQYLIGSGMDPGTENNPYLGFVYTSFQERATAVS-HGNTARLARAHGDDVLAR 235
MR VE+TV LI SGM +PY GF Y FQERATA + H +A +
Sbjct: 61 MRQVERTVHRLISSGMAMHAPVSPYHGFSYVVFQERATAATRHATSAPM----------- 109
Query: 236 TCGTIAADEKRHETAYGRIVEQLL 259
RHE AY R+VE LL
Sbjct: 110 ----------RHEAAYTRVVEMLL 123
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.322 0.135 0.418
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 12,044,723
Number of extensions: 465756
Number of successful extensions: 895
Number of sequences better than 1.0e-10: 9
Number of HSP's gapped: 879
Number of HSP's successfully gapped: 9
Length of query: 381
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 278
Effective length of database: 11,657,759
Effective search space: 3240857002
Effective search space used: 3240857002
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 157 (65.1 bits)