BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0872900 Os01g0872900|AK106574
(358 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0872900 Protein of unknown function DUF635 family protein 752 0.0
Os12g0550700 Protein of unknown function DUF635 family protein 456 e-128
Os04g0286800 Protein of unknown function DUF635 family protein 446 e-125
Os11g0433800 Protein of unknown function DUF635 family protein 432 e-121
Os07g0460801 Protein of unknown function DUF635 family protein 166 2e-41
Os02g0486000 88 8e-18
Os01g0211300 88 8e-18
>Os01g0872900 Protein of unknown function DUF635 family protein
Length = 358
Score = 752 bits (1941), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/358 (100%), Positives = 358/358 (100%)
Query: 1 MFRTRFRMNRRLFLRIVNALGQCSPYFTYRVDCTGRIGLSPLQKCTAAMRMLAYGTPADA 60
MFRTRFRMNRRLFLRIVNALGQCSPYFTYRVDCTGRIGLSPLQKCTAAMRMLAYGTPADA
Sbjct: 1 MFRTRFRMNRRLFLRIVNALGQCSPYFTYRVDCTGRIGLSPLQKCTAAMRMLAYGTPADA 60
Query: 61 LDEYLKIGKCTSLECLDRFTRGVIEVFGGEYLRRPTSSDVERLLQVNESRGFSGMLGSID 120
LDEYLKIGKCTSLECLDRFTRGVIEVFGGEYLRRPTSSDVERLLQVNESRGFSGMLGSID
Sbjct: 61 LDEYLKIGKCTSLECLDRFTRGVIEVFGGEYLRRPTSSDVERLLQVNESRGFSGMLGSID 120
Query: 121 CMHWRWEKCPLAWRGQFTRGDYGVPTIVLEAVASQDLHIWHAFFGVAGSNNDLNVLNQSP 180
CMHWRWEKCPLAWRGQFTRGDYGVPTIVLEAVASQDLHIWHAFFGVAGSNNDLNVLNQSP
Sbjct: 121 CMHWRWEKCPLAWRGQFTRGDYGVPTIVLEAVASQDLHIWHAFFGVAGSNNDLNVLNQSP 180
Query: 181 LFFDALKGEAPQVQFSVNGNEYGTGYYLADGIYPEWAAFMKTIPLPQTEKHKLFAKHQEG 240
LFFDALKGEAPQVQFSVNGNEYGTGYYLADGIYPEWAAFMKTIPLPQTEKHKLFAKHQEG
Sbjct: 181 LFFDALKGEAPQVQFSVNGNEYGTGYYLADGIYPEWAAFMKTIPLPQTEKHKLFAKHQEG 240
Query: 241 ARKDVERAFGVLQSRFTIVRRPARLWRRKSVGRIMLACVILHNMIVEDEREEATIHIDLN 300
ARKDVERAFGVLQSRFTIVRRPARLWRRKSVGRIMLACVILHNMIVEDEREEATIHIDLN
Sbjct: 241 ARKDVERAFGVLQSRFTIVRRPARLWRRKSVGRIMLACVILHNMIVEDEREEATIHIDLN 300
Query: 301 ENPGASFALPPEVNIGGNLCFADVMRKKATVRSRPQHTQLKNDLVEHIWHKFGDNHHN 358
ENPGASFALPPEVNIGGNLCFADVMRKKATVRSRPQHTQLKNDLVEHIWHKFGDNHHN
Sbjct: 301 ENPGASFALPPEVNIGGNLCFADVMRKKATVRSRPQHTQLKNDLVEHIWHKFGDNHHN 358
>Os12g0550700 Protein of unknown function DUF635 family protein
Length = 446
Score = 456 bits (1173), Expect = e-128, Method: Compositional matrix adjust.
Identities = 217/356 (60%), Positives = 260/356 (73%)
Query: 2 FRTRFRMNRRLFLRIVNALGQCSPYFTYRVDCTGRIGLSPLQKCTAAMRMLAYGTPADAL 61
FR RFRM + LFLRIV ALG SPYF R D G++GLSPLQKCTAA+RMLAYGTPAD +
Sbjct: 91 FRRRFRMRKHLFLRIVEALGVWSPYFRLRRDAFGKMGLSPLQKCTAAIRMLAYGTPADLM 150
Query: 62 DEYLKIGKCTSLECLDRFTRGVIEVFGGEYLRRPTSSDVERLLQVNESRGFSGMLGSIDC 121
DE + + T++E + F +GV +FG +YLRRPT D +RLLQ E+ GF MLGS+DC
Sbjct: 151 DETFGVAETTAMESMINFVQGVRHLFGQQYLRRPTQEDTQRLLQFGEAHGFPRMLGSLDC 210
Query: 122 MHWRWEKCPLAWRGQFTRGDYGVPTIVLEAVASQDLHIWHAFFGVAGSNNDLNVLNQSPL 181
MHW+WE CP+AW+GQF RGDYGV TI+LEAVAS D+ IWHAFFGVAGSNND+NVL+QSPL
Sbjct: 211 MHWQWENCPVAWKGQFPRGDYGVSTIMLEAVASADIWIWHAFFGVAGSNNDINVLDQSPL 270
Query: 182 FFDALKGEAPQVQFSVNGNEYGTGYYLADGIYPEWAAFMKTIPLPQTEKHKLFAKHQEGA 241
F + L+G AP VQF+VNG++Y GYYLADGIYPEWAAF+K+I P +K KLFA+ QE A
Sbjct: 271 FTEVLQGRAPTVQFTVNGSDYNMGYYLADGIYPEWAAFVKSIKRPLNDKAKLFAQRQESA 330
Query: 242 RKDVERAFGVLQSRFTIVRRPARLWRRKSVGRIMLACVILHNMIVEDEREEATIHIDLNE 301
RKDVERAFGVLQ R+ I+R PARLW R+ + IM AC+ILHNMIVEDER I D
Sbjct: 331 RKDVERAFGVLQKRWAIIRHPARLWEREELADIMYACIILHNMIVEDERGTYDIPDDNTY 390
Query: 302 NPGASFALPPEVNIGGNLCFADVMRKKATVRSRPQHTQLKNDLVEHIWHKFGDNHH 357
G A ++ G F DV+ K +R R H +LK DL+EHIW KF H
Sbjct: 391 EQGHFSAQMAGLHHGPIYGFEDVLEKNLLIRDRATHRRLKQDLMEHIWQKFAGQQH 446
>Os04g0286800 Protein of unknown function DUF635 family protein
Length = 450
Score = 446 bits (1146), Expect = e-125, Method: Compositional matrix adjust.
Identities = 205/341 (60%), Positives = 252/341 (73%)
Query: 12 LFLRIVNALGQCSPYFTYRVDCTGRIGLSPLQKCTAAMRMLAYGTPADALDEYLKIGKCT 71
LFLRIV ALG SPYF R D G++GLSPLQKCTAAMRMLAYGTPAD +DE + + T
Sbjct: 105 LFLRIVQALGVWSPYFRLRRDAFGKVGLSPLQKCTAAMRMLAYGTPADLMDETFGVAEST 164
Query: 72 SLECLDRFTRGVIEVFGGEYLRRPTSSDVERLLQVNESRGFSGMLGSIDCMHWRWEKCPL 131
++EC+ F +GV +FG +YLRRPT D++RLLQ E+ GF GMLGSIDCMHW W+ CP+
Sbjct: 165 AMECMINFVQGVRHLFGEQYLRRPTVEDIQRLLQFGEAHGFPGMLGSIDCMHWEWQSCPV 224
Query: 132 AWRGQFTRGDYGVPTIVLEAVASQDLHIWHAFFGVAGSNNDLNVLNQSPLFFDALKGEAP 191
AW+GQFTRGDYGVPTI+LEAVAS DL IWHAFFG AGSNND+NVL+QSPLF + ++G AP
Sbjct: 225 AWKGQFTRGDYGVPTIMLEAVASLDLWIWHAFFGAAGSNNDINVLDQSPLFTEMIQGRAP 284
Query: 192 QVQFSVNGNEYGTGYYLADGIYPEWAAFMKTIPLPQTEKHKLFAKHQEGARKDVERAFGV 251
VQF++NG +Y GYYL D IYPEWAAF K+I P++ KHKL+A+ QE ARKDVERAFGV
Sbjct: 285 PVQFTINGTQYNMGYYLTDRIYPEWAAFAKSITRPRSAKHKLYAQRQESARKDVERAFGV 344
Query: 252 LQSRFTIVRRPARLWRRKSVGRIMLACVILHNMIVEDEREEATIHIDLNENPGASFALPP 311
LQ R+ I+R PAR+W R+ + IM AC+ILHNMIVEDER I D G +
Sbjct: 345 LQKRWAIIRHPARIWEREELADIMYACIILHNMIVEDERGSYDIPDDNTYEQGQYYPQMT 404
Query: 312 EVNIGGNLCFADVMRKKATVRSRPQHTQLKNDLVEHIWHKF 352
++ G F +V+ + + R H +LK DL+EH+W KF
Sbjct: 405 GLDHGPIYGFQEVLEQNKAIHDRQTHRRLKGDLIEHVWQKF 445
>Os11g0433800 Protein of unknown function DUF635 family protein
Length = 454
Score = 432 bits (1110), Expect = e-121, Method: Compositional matrix adjust.
Identities = 204/352 (57%), Positives = 259/352 (73%)
Query: 2 FRTRFRMNRRLFLRIVNALGQCSPYFTYRVDCTGRIGLSPLQKCTAAMRMLAYGTPADAL 61
FR R+RM R LFLRIV+ALG+ SPYFT R D R GLSPLQKCT A+R LA GT DA+
Sbjct: 98 FRARYRMRRPLFLRIVHALGEWSPYFTSRRDAINRQGLSPLQKCTIAIRALACGTLGDAI 157
Query: 62 DEYLKIGKCTSLECLDRFTRGVIEVFGGEYLRRPTSSDVERLLQVNESRGFSGMLGSIDC 121
DEY+ G T+LECLD F GVI+ FG EYLR PTS D++ +LQ+NE+RGF GMLGSI C
Sbjct: 158 DEYVDTGISTALECLDWFVEGVIDNFGEEYLRSPTSEDMQHILQMNEARGFPGMLGSIGC 217
Query: 122 MHWRWEKCPLAWRGQFTRGDYGVPTIVLEAVASQDLHIWHAFFGVAGSNNDLNVLNQSPL 181
MHW W+ CP+ WR T D+G T++LEAVAS D IWHAFFG GSNN++ +L Q L
Sbjct: 218 MHWEWKNCPVIWRRHLTHTDHGATTMILEAVASNDSWIWHAFFGAIGSNNEITILGQPQL 277
Query: 182 FFDALKGEAPQVQFSVNGNEYGTGYYLADGIYPEWAAFMKTIPLPQTEKHKLFAKHQEGA 241
F + LKG+A VQFSVN +Y TGYYLADGIYPE F+KT+ LPQ+EK +LFA+HQEGA
Sbjct: 278 FTELLKGQAAHVQFSVNRRQYNTGYYLADGIYPEGNVFVKTVTLPQSEKDQLFARHQEGA 337
Query: 242 RKDVERAFGVLQSRFTIVRRPARLWRRKSVGRIMLACVILHNMIVEDEREEATIHIDLNE 301
RKDV+ AFG+LQSRF IVR P R ++++++ +IM AC+ILHNM VEDE++ + D +E
Sbjct: 338 RKDVQEAFGLLQSRFAIVRGPTRFFQQETLVKIMQACIILHNMTVEDEKDMGSSCFDSDE 397
Query: 302 NPGASFALPPEVNIGGNLCFADVMRKKATVRSRPQHTQLKNDLVEHIWHKFG 353
G L ++N C+A+V+R+ A+V ++P H QL+ DL+EHIW +FG
Sbjct: 398 ILGTLAVLLSDINTVPAGCYAEVVRRNASVCAQPTHAQLRRDLMEHIWQRFG 449
>Os07g0460801 Protein of unknown function DUF635 family protein
Length = 135
Score = 166 bits (420), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 82/136 (60%), Positives = 100/136 (73%), Gaps = 1/136 (0%)
Query: 130 PLAWRGQFTRGDYGVPTIVLEAVASQDLHIWHAFFGVAGSNNDLNVLNQSPLFFDALKGE 189
P W+GQ++ G PT++LEAVAS+DL IWH+FFG+ GS ND+ VL +SPLF G
Sbjct: 1 PTGWKGQYS-GHVDGPTMILEAVASKDLWIWHSFFGLPGSLNDIIVLQRSPLFQRLTLGT 59
Query: 190 APQVQFSVNGNEYGTGYYLADGIYPEWAAFMKTIPLPQTEKHKLFAKHQEGARKDVERAF 249
AP+++F VNGN+Y GYYLA GIYP WA F+KTI PQ K +AK QEG RKDVERAF
Sbjct: 60 APELEFMVNGNKYTMGYYLAVGIYPSWATFVKTISNPQGNKRIHYAKVQEGVRKDVERAF 119
Query: 250 GVLQSRFTIVRRPARL 265
GVLQ+RF +VR PAR
Sbjct: 120 GVLQARFAMVRGPARF 135
>Os02g0486000
Length = 229
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 58/93 (62%)
Query: 8 MNRRLFLRIVNALGQCSPYFTYRVDCTGRIGLSPLQKCTAAMRMLAYGTPADALDEYLKI 67
M+R LFLRIV ++ YF R + G +G + LQK A+RMLAY PAD+LDE ++I
Sbjct: 118 MSRELFLRIVASVEAHDDYFRQRPNAVGLLGATALQKVYGAVRMLAYDIPADSLDEVVRI 177
Query: 68 GKCTSLECLDRFTRGVIEVFGGEYLRRPTSSDV 100
K T +E F + V++VF +YLR PT+ D
Sbjct: 178 SKNTMIEAFKHFVKAVVDVFADQYLRAPTADDT 210
>Os01g0211300
Length = 172
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 57/90 (63%)
Query: 1 MFRTRFRMNRRLFLRIVNALGQCSPYFTYRVDCTGRIGLSPLQKCTAAMRMLAYGTPADA 60
+FR RFRM+R LFLRIV ++ YF R + G +G + LQK A+RMLAY PAD+
Sbjct: 83 LFRRRFRMSRELFLRIVASVEAHDDYFRQRPNAMGLLGATALQKVYGAIRMLAYDIPADS 142
Query: 61 LDEYLKIGKCTSLECLDRFTRGVIEVFGGE 90
LDE ++I + T +E F + V++VF +
Sbjct: 143 LDEVVRISESTMIEAFKHFVKAVVDVFSDQ 172
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.324 0.139 0.442
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 12,884,349
Number of extensions: 556682
Number of successful extensions: 1373
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 1373
Number of HSP's successfully gapped: 7
Length of query: 358
Length of database: 17,035,801
Length adjustment: 102
Effective length of query: 256
Effective length of database: 11,709,973
Effective search space: 2997753088
Effective search space used: 2997753088
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 157 (65.1 bits)