Os11g0433800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF635 family protein.
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Os11g0433800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF635 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 63.05 | 0.373 | 8.47 | 1.9 | 1.22 | 0.598 | 0.127 | -0.387 | 0.694 | 17.6 | 0.009996 | 37 | -- | -- |
| 63.98 | 0.373 | 8.47 | 1.9 | 1.23 | 0.599 | 0.148 | -- | 0.69 | 17.6 | 0.001032 | 36 | -- | -- |
| 63.09 | 0.37 | 8.47 | 1.9 | 1.22 | 0.595 | -- | -0.39 | 0.696 | 17.6 | 1.397e-06 | 36 | -- | -- |
| 63.97 | 0.373 | 8.47 | 1.9 | 1.22 | 0.597 | -- | -- | 0.689 | 17.6 | 0.0008323 | 34 | -- | -- |
| 131.26 | 0.537 | 8.44 | 1.85 | -- | 0.598 | -- | -0.525 | 0.703 | -- | 0.0398 | 30 | -- | -- |
| 70.62 | 0.394 | 8.49 | 1.81 | 1.37 | -- | -0.407 | -- | 0.677 | 19.7 | -- | -- | -- | -- |
| 71.09 | 0.395 | 8.49 | 1.82 | 1.37 | -- | -- | -- | 0.677 | 19.7 | -- | -- | -- | -- |
| 133.06 | 0.54 | 8.45 | 1.83 | -- | 0.595 | -- | -- | 0.696 | -- | 0.04 | 26 | -- | -- |
| 155.88 | 0.585 | 8.52 | -- | 1.19 | 0.326 | -- | -- | 0.48 | 18.7 | 1.16 | 34 | -- | -- |
| 172.24 | 0.613 | 8.45 | 1.8 | -- | -- | -- | -- | 0.657 | -- | -- | -- | -- | -- |
| 158.29 | 0.589 | 8.53 | -- | 1.36 | -- | -- | -- | 0.474 | 19.8 | -- | -- | -- | -- |
| 221.53 | 0.695 | 8.49 | -- | -- | 0.572 | -- | -- | 0.492 | -- | 0.04 | 26 | -- | -- |
| 257.77 | 0.749 | 8.5 | -- | -- | -- | -- | -- | 0.457 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 52.84 | wind | 5.0 | 90 | < th | dose independent | rect. | 9 | 19 |
| 3 | 53.72 | wind | 9.0 | 90 | < th | dose dependent | rect. | 9 | 19 |
| 8 | 54.91 | wind | 7.0 | 270 | < th | dose independent | rect. | 6 | 22 |
| 16 | 55.43 | wind | 9.0 | 270 | < th | dose dependent | rect. | 6 | 21 |
| 25 | 55.73 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 9 | 20 |
| 56 | 56.96 | wind | 5.0 | 90 | < th | dose independent | rect. | 11 | 17 |
| 93 | 57.80 | wind | 5.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 99 | 57.90 | radiation | 30.0 | 90 | < th | dose independent | rect. | 4 | 5 |
| 103 | 57.96 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 3 |
| 104 | 57.96 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 113 | 58.09 | temperature | 20.0 | 270 | > th | dose independent | rect. | 6 | 21 |
| 118 | 58.16 | wind | 5.0 | 10 | < th | dose independent | rect. | 5 | 4 |
| 119 | 58.17 | temperature | 20.0 | 270 | > th | dose independent | rect. | 7 | 19 |
| 121 | 58.18 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 5 | 5 |
| 124 | 58.18 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 5 | 5 |
| 125 | 58.18 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 5 | 5 |
| 126 | 58.18 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 10 | 19 |
| 132 | 58.20 | wind | 9.0 | 10 | < th | dose dependent | rect. | 5 | 4 |
| 137 | 58.25 | wind | 9.0 | 90 | < th | dose dependent | rect. | 9 | 10 |
| 143 | 58.34 | temperature | 30.0 | 90 | < th | dose independent | rect. | 4 | 5 |
| 145 | 58.35 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 5 | 4 |
| 146 | 58.35 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 5 | 4 |
| 148 | 58.37 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 21 |
| 150 | 58.37 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 21 |
| 153 | 58.40 | temperature | 15.0 | 90 | > th | dose independent | rect. | 9 | 19 |
| 155 | 58.42 | wind | 9.0 | 270 | < th | dose dependent | rect. | 4 | 2 |
| 157 | 58.43 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 159 | 58.43 | temperature | 30.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 160 | 58.43 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 163 | 58.43 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 164 | 58.43 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 165 | 58.43 | radiation | 20.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 171 | 58.43 | temperature | 10.0 | 10 | > th | dose independent | rect. | 5 | 4 |
| 173 | 58.43 | temperature | 30.0 | 10 | < th | dose independent | rect. | 5 | 4 |
| 174 | 58.43 | humidity | 50.0 | 10 | > th | dose independent | rect. | 5 | 4 |
| 176 | 58.43 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 5 | 4 |
| 177 | 58.43 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 5 | 4 |
| 178 | 58.43 | temperature | 10.0 | 10 | > th | dose independent | rect. | 9 | 20 |
| 179 | 58.43 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 21 |
| 183 | 58.45 | wind | 9.0 | 30 | < th | dose dependent | rect. | 9 | 7 |
| 184 | 58.46 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 4 | 5 |
| 185 | 58.46 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 4 | 5 |
| 206 | 58.51 | humidity | 60.0 | 90 | > th | dose independent | rect. | 4 | 5 |
| 209 | 58.51 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 5 | 4 |
| 215 | 58.55 | temperature | 10.0 | 90 | > th | dose independent | rect. | 4 | 5 |
| 218 | 58.55 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 4 | 5 |
| 219 | 58.55 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 4 | 5 |
| 224 | 58.56 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 9 | 20 |
| 231 | 58.59 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 240 | 58.66 | wind | 5.0 | 90 | < th | dose independent | rect. | 9 | 6 |
| 256 | 58.72 | wind | 9.0 | 90 | < th | dose dependent | rect. | 4 | 5 |
| 265 | 58.76 | radiation | 1.0 | 10 | > th | dose independent | rect. | 5 | 4 |
| 279 | 58.79 | wind | 5.0 | 270 | < th | dose independent | rect. | 7 | 8 |
| 280 | 58.80 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 9 | 20 |
| 282 | 58.80 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 9 | 20 |
| 294 | 58.83 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 9 | 19 |
| 311 | 58.86 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 9 | 19 |
| 312 | 58.86 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 9 | 19 |
| 313 | 58.87 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 315 | 58.89 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 328 | 58.94 | radiation | 40.0 | 10 | < th | dose independent | rect. | 5 | 4 |
| 334 | 58.97 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 4 | 4 |
| 349 | 59.01 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 4 | 2 |
| 460 | 59.38 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 6 | 21 |
| 463 | 59.39 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 4 | 2 |
| 464 | 59.39 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 5 | 4 |
| 489 | 59.48 | radiation | 1.0 | 30 | < th | dose dependent | sin | 11 | NA |
| 496 | 59.52 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 22 | 14 |
| 503 | 59.59 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 9 | 20 |
| 506 | 59.61 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 5 | 4 |
| 508 | 59.61 | wind | 5.0 | 270 | < th | dose independent | rect. | 7 | 11 |
| 530 | 59.71 | radiation | 1.0 | 30 | > th | dose independent | rect. | 16 | 17 |
| 558 | 59.81 | wind | 1.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 588 | 59.88 | radiation | 1.0 | 30 | < th | dose independent | sin | 11 | NA |
| 597 | 59.90 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 9 | 19 |
| 607 | 59.91 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 4 | 5 |
| 620 | 59.96 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 4 | 2 |
| 621 | 59.96 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 4 | 4 |
| 639 | 60.03 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 4 | 5 |
| 682 | 60.18 | wind | 7.0 | 270 | < th | dose independent | rect. | 22 | 14 |
| 684 | 60.19 | wind | 1.0 | 30 | > th | dose independent | rect. | 5 | 4 |
| 693 | 60.21 | wind | 9.0 | 90 | < th | dose dependent | rect. | 17 | 11 |
| 713 | 60.25 | wind | 5.0 | 90 | < th | dose independent | rect. | 13 | 15 |
| 745 | 60.33 | wind | 9.0 | 1440 | < th | dose independent | rect. | 5 | 4 |
| 749 | 60.33 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 5 | 4 |
| 785 | 60.39 | radiation | 1.0 | 30 | > th | dose independent | sin | 11 | NA |
| 807 | 60.44 | wind | 5.0 | 90 | < th | dose independent | rect. | 17 | 11 |
| 839 | 60.50 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 5 | 4 |
| 921 | 60.63 | wind | 1.0 | 270 | > th | dose independent | rect. | 2 | 5 |
| 924 | 60.63 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 3 | 15 |
| 958 | 60.71 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 9 | 5 |
| 966 | 60.73 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 5 | 4 |