BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0870100 Os01g0870100|AK067564
(965 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0870100 Protein of unknown function DUF1012 family pro... 1670 0.0
Os03g0843600 Protein of unknown function DUF1012 family pro... 983 0.0
Os03g0163100 Protein of unknown function DUF1012 family pro... 172 1e-42
AK110373 105 2e-22
>Os01g0870100 Protein of unknown function DUF1012 family protein
Length = 965
Score = 1670 bits (4324), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 835/935 (89%), Positives = 835/935 (89%)
Query: 31 QLTKSRTISGSAASAFDRWGTXXXXXXXXXXXXXTXXXXXXXXXXXXXTVAVDEPSYAAP 90
QLTKSRTISGSAASAFDRWGT T TVAVDEPSYAAP
Sbjct: 31 QLTKSRTISGSAASAFDRWGTSNSSSSILVRRSSTAPLPPGAAPRGLLTVAVDEPSYAAP 90
Query: 91 NGGAAMLDRDWCYPSFLGPHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 150
NGGAAMLDRDWCYPSFLGPH
Sbjct: 91 NGGAAMLDRDWCYPSFLGPHASRPRPPRSQQQTPTTTAAAAADSRSPTPAAPPQTASVSQ 150
Query: 151 REEEKSLASVVKRPMLLDEXXXXXXXXXXXXXXXFDLSPYLVLMLVVTVISFSLAIWQWM 210
REEEKSLASVVKRPMLLDE FDLSPYLVLMLVVTVISFSLAIWQWM
Sbjct: 151 REEEKSLASVVKRPMLLDERRSLSPPPPQQRAPRFDLSPYLVLMLVVTVISFSLAIWQWM 210
Query: 211 KATVLQEKIRSCCSVSTVDCKTTTEAFKINGQHGSDFINSADWNLASCSRMLVFAIPVFL 270
KATVLQEKIRSCCSVSTVDCKTTTEAFKINGQHGSDFINSADWNLASCSRMLVFAIPVFL
Sbjct: 211 KATVLQEKIRSCCSVSTVDCKTTTEAFKINGQHGSDFINSADWNLASCSRMLVFAIPVFL 270
Query: 271 VKYIDQLRRRNTDSIRLRSTEEEVPLKKRIAYKVDVFFSGHPYAKXXXXXXXXXXXXXXX 330
VKYIDQLRRRNTDSIRLRSTEEEVPLKKRIAYKVDVFFSGHPYAK
Sbjct: 271 VKYIDQLRRRNTDSIRLRSTEEEVPLKKRIAYKVDVFFSGHPYAKLLALLLATIILIASG 330
Query: 331 XXXXYVVSGSGFLEALWLSWTFVADSGNHADQVGLGPRIVSVSISSGGMLVFATMLGLVS 390
YVVSGSGFLEALWLSWTFVADSGNHADQVGLGPRIVSVSISSGGMLVFATMLGLVS
Sbjct: 331 GIALYVVSGSGFLEALWLSWTFVADSGNHADQVGLGPRIVSVSISSGGMLVFATMLGLVS 390
Query: 391 DAISEKVDSWRKGKSEVIEVNHILILGWSDKLGSLLKQLAIANKSIGGGVVVVLAERDKE 450
DAISEKVDSWRKGKSEVIEVNHILILGWSDKLGSLLKQLAIANKSIGGGVVVVLAERDKE
Sbjct: 391 DAISEKVDSWRKGKSEVIEVNHILILGWSDKLGSLLKQLAIANKSIGGGVVVVLAERDKE 450
Query: 451 EMEMDIGKLEFDFMGTSVICRSGSPLILADLKKVSVSKARAIIVLASDENADQSDARALR 510
EMEMDIGKLEFDFMGTSVICRSGSPLILADLKKVSVSKARAIIVLASDENADQSDARALR
Sbjct: 451 EMEMDIGKLEFDFMGTSVICRSGSPLILADLKKVSVSKARAIIVLASDENADQSDARALR 510
Query: 511 VVLSLTGVKEGLRGHVVVEMSDLDNEPLVKLVGGELIETVVAHDVIGRLMIQCALQPGLA 570
VVLSLTGVKEGLRGHVVVEMSDLDNEPLVKLVGGELIETVVAHDVIGRLMIQCALQPGLA
Sbjct: 511 VVLSLTGVKEGLRGHVVVEMSDLDNEPLVKLVGGELIETVVAHDVIGRLMIQCALQPGLA 570
Query: 571 QIWEDILGFENAEFYIKRWPELDGMRFGDVLISFPDAVPCGVKIASKAGKILMNPDNDYV 630
QIWEDILGFENAEFYIKRWPELDGMRFGDVLISFPDAVPCGVKIASKAGKILMNPDNDYV
Sbjct: 571 QIWEDILGFENAEFYIKRWPELDGMRFGDVLISFPDAVPCGVKIASKAGKILMNPDNDYV 630
Query: 631 LQEGDEVLVIAEDDDTYVPASLPQVRKGFLPNIPTPPKYPEKILFCGWRRDIHDMIMVLE 690
LQEGDEVLVIAEDDDTYVPASLPQVRKGFLPNIPTPPKYPEKILFCGWRRDIHDMIMVLE
Sbjct: 631 LQEGDEVLVIAEDDDTYVPASLPQVRKGFLPNIPTPPKYPEKILFCGWRRDIHDMIMVLE 690
Query: 691 AFLAPGSELWMFNEVPEKERERKLTDGGMDIYGLTNIKLVHKEGNAVIRRHLESLPLETF 750
AFLAPGSELWMFNEVPEKERERKLTDGGMDIYGLTNIKLVHKEGNAVIRRHLESLPLETF
Sbjct: 691 AFLAPGSELWMFNEVPEKERERKLTDGGMDIYGLTNIKLVHKEGNAVIRRHLESLPLETF 750
Query: 751 DSILILADESVEDSIVHSDSRSLATLLLIRDIQSKRLPSKELKSPLRYNGFCHSSWIREM 810
DSILILADESVEDSIVHSDSRSLATLLLIRDIQSKRLPSKELKSPLRYNGFCHSSWIREM
Sbjct: 751 DSILILADESVEDSIVHSDSRSLATLLLIRDIQSKRLPSKELKSPLRYNGFCHSSWIREM 810
Query: 811 QHASDKSIIISEILDSRTRNLVSVSKISDYVLSNELVSMALAMVAEDKQINRVLEELFAE 870
QHASDKSIIISEILDSRTRNLVSVSKISDYVLSNELVSMALAMVAEDKQINRVLEELFAE
Sbjct: 811 QHASDKSIIISEILDSRTRNLVSVSKISDYVLSNELVSMALAMVAEDKQINRVLEELFAE 870
Query: 871 EGNEMCIRSAEFYLYEQEELSFFDIMVRARERDEVVIGYRLANDDQAIINPEQKSEIRKW 930
EGNEMCIRSAEFYLYEQEELSFFDIMVRARERDEVVIGYRLANDDQAIINPEQKSEIRKW
Sbjct: 871 EGNEMCIRSAEFYLYEQEELSFFDIMVRARERDEVVIGYRLANDDQAIINPEQKSEIRKW 930
Query: 931 SLDDVFVVISKAGNATYFVKTTVMRSNPVVYSSTF 965
SLDDVFVVISKAGNATYFVKTTVMRSNPVVYSSTF
Sbjct: 931 SLDDVFVVISKAGNATYFVKTTVMRSNPVVYSSTF 965
>Os03g0843600 Protein of unknown function DUF1012 family protein
Length = 893
Score = 983 bits (2541), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 492/728 (67%), Positives = 582/728 (79%), Gaps = 15/728 (2%)
Query: 218 KIRSCCSVSTVDCKTTTEAFKINGQHGSDFINSADWNLASCSRMLVFAIPVFLVKYIDQL 277
K++SC + S++D + +++ N N N + + P+ ++KY+D
Sbjct: 175 KLQSCITESSMDMSSIL-SYQSNNSTSQ---NRGLKNFSLLLSLSTLYAPLLILKYMDLF 230
Query: 278 RRRNTDSIRLRST---EEEVPLKKRIAYKVDVFFSGHPYAKXXXXXXXXXXXXXXXXXXX 334
++LRS+ EEEVP+ KR+AY+VD+F S PYAK
Sbjct: 231 -------LKLRSSQDSEEEVPINKRLAYRVDIFLSLQPYAKPLVLLVATLLLIGLGGLAL 283
Query: 335 YVVSGSGFLEALWLSWTFVADSGNHADQVGLGPRIVSVSISSGGMLVFATMLGLVSDAIS 394
Y V+ L+ LWLSWTFVADSGNHA+ G GP++VSVSIS GGMLVFA MLGLV+D+IS
Sbjct: 284 YGVNDDSLLDCLWLSWTFVADSGNHANAEGFGPKLVSVSISIGGMLVFAMMLGLVTDSIS 343
Query: 395 EKVDSWRKGKSEVIEVNHILILGWSDKLGSLLKQLAIANKSIGGGVVVVLAERDKEEMEM 454
EK DS RKG+SEVIE +H L+LGWSDKLGSLL Q+AIAN+S+GGG +VV+AE+DKEEME
Sbjct: 344 EKFDSLRKGRSEVIEQSHTLVLGWSDKLGSLLNQIAIANESLGGGTIVVMAEKDKEEMEA 403
Query: 455 DIGKLEFDFMGTSVICRSGSPLILADLKKVSVSKARAIIVLASDENADQSDARALRVVLS 514
DI K+EFD GT++ICRSGSPLILADLKKVSVSKARAI+VLA + NADQSDARALR VLS
Sbjct: 404 DIAKMEFDLKGTAIICRSGSPLILADLKKVSVSKARAIVVLAEEGNADQSDARALRTVLS 463
Query: 515 LTGVKEGLRGHVVVEMSDLDNEPLVKLVGGELIETVVAHDVIGRLMIQCALQPGLAQIWE 574
LTGVKEGLRGH+VVE+SDLDNE LVKLVGG+L+ETVVAHDVIGRLMIQCA QPGLAQIWE
Sbjct: 464 LTGVKEGLRGHIVVELSDLDNEVLVKLVGGDLVETVVAHDVIGRLMIQCARQPGLAQIWE 523
Query: 575 DILGFENAEFYIKRWPELDGMRFGDVLISFPDAVPCGVKIASKAGKILMNPDNDYVLQEG 634
DILGFEN EFYIKRWP+LDGM+F DVLISFPDA+PCG+K+AS GKI++NPD+ YVLQEG
Sbjct: 524 DILGFENCEFYIKRWPQLDGMQFEDVLISFPDAIPCGIKVASYGGKIILNPDDFYVLQEG 583
Query: 635 DEVLVIAEDDDTYVPASLPQVRKGFLPNIPTPPKYPEKILFCGWRRDIHDMIMVLEAFLA 694
DEVLVIAEDDDTY PA LP+V +G+LP PK PE+ILFCGWRRD+ DMIMVL+AFLA
Sbjct: 584 DEVLVIAEDDDTYAPAPLPKVMRGYLPKDFVVPKSPERILFCGWRRDMEDMIMVLDAFLA 643
Query: 695 PGSELWMFNEVPEKERERKLTDGGMDIYGLTNIKLVHKEGNAVIRRHLESLPLETFDSIL 754
PGSELWMFN+VPE +RERKL DGG+D L NI LVH+EGNAVIRRHLESLPLE+FDSIL
Sbjct: 644 PGSELWMFNDVPEMDRERKLIDGGLDFSRLENITLVHREGNAVIRRHLESLPLESFDSIL 703
Query: 755 ILADESVEDSIVHSDSRSLATLLLIRDIQSKRLPSKE-LKSPLRYNGFCHSSWIREMQHA 813
ILADESVEDS + +DSRSLATLLLIRDIQ+KRLP +E + S + FC SWI EMQ A
Sbjct: 704 ILADESVEDSAIQADSRSLATLLLIRDIQAKRLPFREAMVSHVTRGSFCEGSWIGEMQQA 763
Query: 814 SDKSIIISEILDSRTRNLVSVSKISDYVLSNELVSMALAMVAEDKQINRVLEELFAEEGN 873
SDKS+IISEILD RT+NL+SVSKISDYVLSNELVSMALAMVAED+QIN VLEELFAE+GN
Sbjct: 764 SDKSVIISEILDPRTKNLLSVSKISDYVLSNELVSMALAMVAEDRQINDVLEELFAEQGN 823
Query: 874 EMCIRSAEFYLYEQEELSFFDIMVRARERDEVVIGYRLANDDQAIINPEQKSEIRKWSLD 933
EM IR A+ YL E EEL+FF++M+R R+R E+VIGYRL + ++AIINP K R+WS
Sbjct: 824 EMQIRPADLYLREDEELNFFEVMLRGRQRKEIVIGYRLVDAERAIINPPDKVSRRRWSAK 883
Query: 934 DVFVVISK 941
DVFVVI++
Sbjct: 884 DVFVVITE 891
>Os03g0163100 Protein of unknown function DUF1012 family protein
Length = 858
Score = 172 bits (436), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 164/662 (24%), Positives = 302/662 (45%), Gaps = 103/662 (15%)
Query: 344 EALWLSWTFVADSGNHADQVGLGPRIVSVSISSGGMLVFATMLGLVSDAISEKVDSWRKG 403
E W +W + S H Q R++ ++ G+L ++ +L ++ ++ R+G
Sbjct: 221 ECFWEAWACLISSSTHLRQKTRIERVLGFFLAIWGILFYSRLLSATTEQFRIQMHKVREG 280
Query: 404 -KSEVIEVNHILILGWSDKLGSLLKQLAIANKS---IGGGV-----VVVLAERDKEEMEM 454
+ +VIE +HI+I G + L S+L QL ++S +G +++L++ ++++E
Sbjct: 281 AQQQVIEDDHIIICGVNSHLPSILNQLNKFHESSIRLGTATARKQRILLLSDLPRKQIEK 340
Query: 455 DIGKLEFDFMGTSVICRSGSPLILADLKKVSVSKARAIIVLASDENADQSDARALRVVLS 514
D V +S S + ++ + +KA++II+L + + D A +L+
Sbjct: 341 LGDSFAKDLNHIDVFTKSCSLSLTKSFERAAANKAKSIIILPAKNERYEVDTDAFLSLLA 400
Query: 515 LTGVKEGLRGHVVVEMSDLDNEPLVKLVGGELIETVVAHDVIGRLMIQCALQPGLAQIWE 574
L + + +VE S+ L+K + G ++ V +L +QC+ Q GL +I+
Sbjct: 401 LQSLPQIASIPTIVEASNSTTCDLLKSITGLNVQPV--EMAASKLFVQCSRQKGLIKIYR 458
Query: 575 DILGFENAEFYIKRWPELDGMRFGDVLISFPDAVPCGVKIASKAGKILMNPDNDYVLQEG 634
+L + F + + E+ GM++ DV PDAV CG+ ++G + +P D VL E
Sbjct: 459 HLLNYHKNVFNLFSFREVVGMKYVDVRRRIPDAVVCGI---FRSGMMHFHPCEDEVLTEK 515
Query: 635 DEVLVI-------------------AEDDDTYVPAS----------------LPQVRKGF 659
D++L+I A++ Y ++ L +RK
Sbjct: 516 DKLLLIAPVSWRRRAQSTFSNSPNGAQNSSHYSESTEGQRSSSMALEVNETRLNSIRKRP 575
Query: 660 LPNIPTPPKYP----EKILFCGWRRDIHDMIMVLEAFLAPGSELWMFNEVPEKERERKLT 715
+ Y E +L GWR + DMI + +L PGS L + +E P KER +
Sbjct: 576 SKTLSKSNDYTLGPREHVLIVGWRPKVTDMIREYDNYLGPGSVLEILSETPIKERS-SIV 634
Query: 716 DGGMDIYGLTNIKLVHKEG---------NAVI-----RRHLESLPLETFDSILILADES- 760
+ M L NIK+ H+ G A+I R+H +++P S+++++D+
Sbjct: 635 NPLMQ-KQLKNIKVNHQVGCPMNYDTLKEAIIKFKKSRKHDQNVPF----SVVVISDKDW 689
Query: 761 VEDSIVHSDSRSLATLLLIRDIQSKRLPSKELKSPLRYNGFCHSSWIREMQHASDKSIII 820
+ D + TLLL +I C I+ ++H ++
Sbjct: 690 LGGDTAQVDKQLAYTLLLAENI-------------------CQKHDIK-VEH------LV 723
Query: 821 SEILDSRTRNLVSVSKIS-DYVLSNELVSMALAMVAEDKQINRVLEELFAEEGNEMCIRS 879
SEI+D+ +S K S ++ + E++S+ A VA ++N V +++ EG+E+ I+
Sbjct: 724 SEIVDTGLGKQMSRIKPSLSFIGAEEVMSLVTAQVAGSSELNEVWKDILNAEGDEIYIKE 783
Query: 880 AEFYLYEQEELSFFDIMVRARERDEVVIGYRLANDDQAIINPEQKSEIRKWSLDDVFVVI 939
FY+ E E++SF ++ RA R EV +GY + INP K E+ + + D +VI
Sbjct: 784 IGFYMKEGEKISFSELTERAILRREVAVGY--VKGKKQYINPTNKLELLSFEMTDQLIVI 841
Query: 940 SK 941
S+
Sbjct: 842 SE 843
>AK110373
Length = 1065
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 149/292 (51%), Gaps = 20/292 (6%)
Query: 368 RIVSVSISSGGMLVFATMLGLVSDAISEKVDSWRKGKSEVIEVNHILILGWS------DK 421
++ S+ + G++ FA +L LV ++ + ++ + S V+E HIL+L W K
Sbjct: 144 QVSSIGLYLSGLIGFAVLLALVEQSVLQVYETRVELGSPVLETGHILVLCWCKSPADVSK 203
Query: 422 LGSLLKQLAIANKSIGGGVVVVLAERDKEEME--MDIGKLEFDFMGTSVICRSGSPLILA 479
L ++L+QL A K GG +V+L +R K EME + + G+ + R G+PL A
Sbjct: 204 LETILRQLCAAYKCSGGRTIVILCQRRKTEMEDLLRNAIPQQQRGGSRFVFRQGNPLTAA 263
Query: 480 DLKKVSVSKARAIIVL-ASDENADQSDARALRVVLSLTGVKEGLR---------GHVVVE 529
DLK V+ A A++VL S AD SD++ LRV++ L + R GHVV E
Sbjct: 264 DLKLVAAGDASAVLVLADSAATADASDSQVLRVLVLLDESEVAARQEGRPRPSPGHVVAE 323
Query: 530 MSDLDNEPLVKLVGGELIETVVAHDVIGRLMIQCALQPGLAQIWEDILGFENAE-FYIKR 588
+ D PL+K V + + + +H + + +P ++ + + + FEN+ ++
Sbjct: 324 VLTNDAMPLLKFVPSKAVLPLPSHRLNATRLAVLVTRPVVSHLTDTLWDFENSSAVFMHH 383
Query: 589 WPELDGMRFGDVLISFPDAVPCGVKIASKAGKILMNPDNDYVLQEGDEVLVI 640
+P+L G DV + F + + G+ AS G +L+NP Y L + ++++
Sbjct: 384 FPQLAGQTVADVALRFENGIVIGLLEAS-TGFVLINPPPAYKLNADERIILL 434
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.320 0.135 0.395
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 27,411,192
Number of extensions: 1063123
Number of successful extensions: 2293
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 2280
Number of HSP's successfully gapped: 6
Length of query: 965
Length of database: 17,035,801
Length adjustment: 110
Effective length of query: 855
Effective length of database: 11,292,261
Effective search space: 9654883155
Effective search space used: 9654883155
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 161 (66.6 bits)