BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os01g0829100 Os01g0829100|AK060644
         (426 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os01g0829100  Major sperm protein domain containing protein       540   e-154
Os03g0655500  PapD-like domain containing protein                  68   1e-11
Os08g0542700  Ankyrin repeat containing protein                    65   7e-11

>Os01g0829100 Major sperm protein domain containing protein
          Length = 426

 Score =  540 bits (1392), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 294/375 (78%), Positives = 294/375 (78%)

Query: 33  EQLLEVAEDEVVIDFKPNAKCRADLRLRSLHPSLPVAFKVQTSSPLKFLVSPPRGAVQPL 92
           EQLLEVAEDEVVIDFKPNAKCRADLRLRSLHPSLPVAFKVQTSSPLKFLVSPPRGAVQPL
Sbjct: 33  EQLLEVAEDEVVIDFKPNAKCRADLRLRSLHPSLPVAFKVQTSSPLKFLVSPPRGAVQPL 92

Query: 93  SSASLRVVLRPQQHAPASFPRSRGDRFLVXXXXXXXXXXXXXXXXXXTGGTTAIRLRVFF 152
           SSASLRVVLRPQQHAPASFPRSRGDRFLV                  TGGTTAIRLRVFF
Sbjct: 93  SSASLRVVLRPQQHAPASFPRSRGDRFLVLSSLSAAHLDSSASSSAATGGTTAIRLRVFF 152

Query: 153 GGPYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAAVPDGAEQWAPLHAVAARGDTGEV 212
           GGPY                              EAAVPDGAEQWAPLHAVAARGDTGEV
Sbjct: 153 GGPYLLRLAAEAGDAAAVRLILRRQPHLLPLLEPEAAVPDGAEQWAPLHAVAARGDTGEV 212

Query: 213 RRLGPDSMGARDREGRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLDVAREKGY 272
           RRLGPDSMGARDREGRT                                 PLDVAREKGY
Sbjct: 213 RRLGPDSMGARDREGRTALHVAAAAGEAEAAAALVDMGADAAATDARGRTPLDVAREKGY 272

Query: 273 QEVVDVLERWELVMTAARRGDLQSLESLLSKRAGVRGRDQYGLTALHLAAIKGHCDVIAL 332
           QEVVDVLERWELVMTAARRGDLQSLESLLSKRAGVRGRDQYGLTALHLAAIKGHCDVIAL
Sbjct: 273 QEVVDVLERWELVMTAARRGDLQSLESLLSKRAGVRGRDQYGLTALHLAAIKGHCDVIAL 332

Query: 333 LAGSGCMDIECEDVEGHRPLHLAVEGGSAEAVELLLDMGAEVHAATRRGATPLQMAVTMG 392
           LAGSGCMDIECEDVEGHRPLHLAVEGGSAEAVELLLDMGAEVHAATRRGATPLQMAVTMG
Sbjct: 333 LAGSGCMDIECEDVEGHRPLHLAVEGGSAEAVELLLDMGAEVHAATRRGATPLQMAVTMG 392

Query: 393 YEAIALLLRGRGADE 407
           YEAIALLLRGRGADE
Sbjct: 393 YEAIALLLRGRGADE 407



>Os03g0655500 PapD-like domain containing protein
          Length = 556

 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 45/130 (34%), Positives = 66/130 (50%), Gaps = 1/130 (0%)

Query: 275 VVDVLERWELVMTAARRGDLQSLESLLSKRAGVRGRDQYGLTALHLAAIKGHCDVIALLA 334
           ++D L   E ++ AAR+G+ +++       A V GRD +G T L  AA KG  D +  L 
Sbjct: 371 IMDFLGLGEAILAAARKGEARAVRRAADGGASVEGRDAHGWTPLMRAAFKGRADTVRDLV 430

Query: 335 GSGCMDIECEDVEGHRPLHLAVEGGSAEAVELLLDMGAEVHAATRRGATPLQMAVTMGYE 394
             G  D++  D EG+  LH A E G A+ V+LLL  GA     T +G +  ++A   G  
Sbjct: 431 DRGA-DMDATDAEGYTALHCAAEAGRADVVDLLLKSGANAKTTTVKGRSAAEVAAAAGKS 489

Query: 395 AIALLLRGRG 404
            +  LL   G
Sbjct: 490 KVVRLLEKAG 499



>Os08g0542700 Ankyrin repeat containing protein
          Length = 557

 Score = 65.5 bits (158), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 81/156 (51%), Gaps = 15/156 (9%)

Query: 264 LDVAREKGYQEVVDVLERWE-------------LVMTAARRGDLQSLESLLSKRAGVRGR 310
           LD A   G+ E+V++L   +             ++ +AAR G ++ + SLLS+  G+  R
Sbjct: 158 LDTAAILGHTEIVNLLLESDANLARIARNNGKTVLHSAARLGHVEIVRSLLSRDPGIGLR 217

Query: 311 -DQYGLTALHLAAIKGHCDVIALLAGSGCMDIECEDVEGHRPLHLAVEGGSAEAVELLLD 369
            D+ G TALH+A+   + +++  L       I  ED +G+RPLH+A    +   V+ LL 
Sbjct: 218 TDKKGQTALHMASKGQNAEIVIELLKPDISVIHLEDNKGNRPLHVATRKANIVIVQTLLS 277

Query: 370 M-GAEVHAATRRGATPLQMAVTMGYEAIALLLRGRG 404
           + G EV+A  R G T L +A  +  E +  +LR  G
Sbjct: 278 VEGIEVNAVNRSGHTALAIAEQLNNEELVNILREAG 313



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.320    0.136    0.398 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 10,666,365
Number of extensions: 393058
Number of successful extensions: 1606
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 1634
Number of HSP's successfully gapped: 3
Length of query: 426
Length of database: 17,035,801
Length adjustment: 104
Effective length of query: 322
Effective length of database: 11,605,545
Effective search space: 3736985490
Effective search space used: 3736985490
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 157 (65.1 bits)