Os01g0829100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Major sperm protein domain containing protein.
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Os01g0829100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Major sperm protein domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 94.19 | 0.456 | 8.84 | 0.467 | 0.926 | 1.81 | -0.709 | 0.666 | 0.348 | 7.22 | 9.455 | 5536 | -- | -- |
| 94.56 | 0.453 | 8.87 | 0.322 | 0.918 | 1.76 | -0.701 | -- | 0.306 | 7.17 | 4.255 | 5610 | -- | -- |
| 95.52 | 0.455 | 8.84 | 0.444 | 0.925 | 1.81 | -- | 0.633 | 0.347 | 7.18 | 9.707 | 5536 | -- | -- |
| 95.84 | 0.456 | 8.87 | 0.304 | 0.918 | 1.76 | -- | -- | 0.304 | 7.12 | 4.473 | 5622 | -- | -- |
| 139.24 | 0.55 | 8.88 | 0.396 | -- | 1.87 | -- | 0.707 | 0.276 | -- | 4.915 | 7133 | -- | -- |
| 146.28 | 0.567 | 8.79 | 1.16 | 0.949 | -- | -0.725 | -- | 0.675 | 6.88 | -- | -- | -- | -- |
| 147.61 | 0.569 | 8.78 | 1.15 | 0.948 | -- | -- | -- | 0.677 | 6.81 | -- | -- | -- | -- |
| 139.47 | 0.55 | 8.91 | 0.253 | -- | 1.79 | -- | -- | 0.221 | -- | 6.85 | 7140 | -- | -- |
| 96.42 | 0.457 | 8.9 | -- | 0.918 | 1.89 | -- | -- | 0.153 | 7.06 | 1.514 | 7195 | -- | -- |
| 194.61 | 0.652 | 8.8 | 1.17 | -- | -- | -- | -- | 0.695 | -- | -- | -- | -- | -- |
| 182.2 | 0.631 | 8.81 | -- | 0.961 | -- | -- | -- | 0.549 | 6.74 | -- | -- | -- | -- |
| 140.68 | 0.552 | 8.92 | -- | -- | 1.93 | -- | -- | 0.163 | -- | 9.061 | 7144 | -- | -- |
| 230.51 | 0.709 | 8.83 | -- | -- | -- | -- | -- | 0.566 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 89.78 | temperature | 15 | 270 | > th | dose dependent | rect. | 2 | 20 |
| 2 | 90.22 | temperature | 10 | 270 | > th | dose dependent | rect. | 1 | 22 |
| 12 | 93.67 | temperature | 10 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 14 | 93.74 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 20 |
| 15 | 93.86 | temperature | 30 | 4320 | < th | dose dependent | rect. | 7 | 1 |
| 17 | 94.01 | temperature | 10 | 4320 | > th | dose dependent | rect. | 4 | 6 |
| 18 | 94.02 | temperature | 10 | 4320 | > th | dose dependent | rect. | 6 | 3 |
| 23 | 94.08 | temperature | 30 | 4320 | < th | dose dependent | rect. | 4 | 6 |
| 25 | 94.10 | temperature | 30 | 4320 | < th | dose dependent | rect. | 6 | 3 |
| 55 | 94.52 | temperature | 10 | 1440 | > th | dose dependent | rect. | 2 | 16 |
| 94 | 94.75 | temperature | 10 | 1440 | > th | dose dependent | sin | 2 | NA |
| 201 | 95.22 | temperature | 10 | 4320 | > th | dose dependent | sin | 5 | NA |
| 286 | 95.55 | temperature | 30 | 4320 | < th | dose dependent | sin | 6 | NA |
| 618 | 96.25 | temperature | 10 | 4320 | > th | dose dependent | rect. | 17 | 18 |
| 619 | 96.25 | temperature | 10 | 4320 | > th | dose dependent | rect. | 15 | 20 |
| 674 | 96.32 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 16 |
| 769 | 96.44 | temperature | 10 | 4320 | > th | dose dependent | no | NA | NA |
| 783 | 96.45 | temperature | 25 | 4320 | < th | dose independent | rect. | 5 | 9 |