Os03g0655500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : PapD-like domain containing protein.
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Os03g0655500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : PapD-like domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 233.75 | 0.718 | 5.98 | -0.532 | 0.974 | 0.834 | 0.149 | 1.75 | -0.561 | 11.7 | 69.59 | 1237 | -- | -- |
| 237.72 | 0.718 | 5.99 | -0.754 | 0.999 | 0.972 | -0.113 | -- | -0.521 | 11.7 | 68 | 1215 | -- | -- |
| 233.83 | 0.712 | 5.98 | -0.534 | 0.975 | 0.836 | -- | 1.7 | -0.562 | 11.8 | 69.58 | 1234 | -- | -- |
| 237.76 | 0.718 | 5.99 | -0.749 | 0.995 | 0.969 | -- | -- | -0.515 | 11.7 | 67.92 | 1216 | -- | -- |
| 275.73 | 0.773 | 6.01 | -0.576 | -- | 1.02 | -- | 1.61 | -0.651 | -- | 70 | 1598 | -- | -- |
| 271.28 | 0.772 | 6 | -0.552 | 0.772 | -- | -0.285 | -- | -0.555 | 11.5 | -- | -- | -- | -- |
| 271.61 | 0.772 | 6 | -0.564 | 0.774 | -- | -- | -- | -0.556 | 11.4 | -- | -- | -- | -- |
| 276.22 | 0.774 | 6.04 | -0.769 | -- | 1.03 | -- | -- | -0.69 | -- | 70.73 | 1596 | -- | -- |
| 252.17 | 0.74 | 5.97 | -- | 0.971 | 0.851 | -- | -- | -0.438 | 11.7 | 67.99 | 1217 | -- | -- |
| 309.21 | 0.822 | 6.02 | -0.585 | -- | -- | -- | -- | -0.564 | -- | -- | -- | -- | -- |
| 280 | 0.783 | 5.98 | -- | 0.78 | -- | -- | -- | -0.493 | 11.5 | -- | -- | -- | -- |
| 291.29 | 0.795 | 6.02 | -- | -- | 0.92 | -- | -- | -0.601 | -- | 71.14 | 1595 | -- | -- |
| 318.22 | 0.833 | 6 | -- | -- | -- | -- | -- | -0.499 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 215.11 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 4 | 3 |
| 2 | 216.13 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 5 | 217.16 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 6 | 217.53 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 7 | 217.73 | wind | 9.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 8 | 217.75 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 23 | 8 |
| 9 | 217.97 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 6 |
| 10 | 217.98 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 13 | 218.13 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 3 |
| 15 | 218.38 | wind | 9.0 | 14400 | > th | dose independent | rect. | 7 | 4 |
| 16 | 218.42 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 6 |
| 20 | 218.87 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 3 |
| 22 | 219.01 | wind | 3.0 | 43200 | < th | dose independent | rect. | 23 | 8 |
| 27 | 219.25 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 34 | 219.73 | wind | 9.0 | 14400 | < th | dose independent | rect. | 6 | 5 |
| 35 | 219.73 | wind | 3.0 | 43200 | > th | dose independent | rect. | 23 | 8 |
| 40 | 219.89 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 1 | 6 |
| 48 | 220.15 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 4 | 3 |
| 65 | 220.72 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 23 | 8 |
| 79 | 221.36 | wind | 7.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 121 | 222.59 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 6 |
| 124 | 222.64 | wind | 1.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 134 | 222.74 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 12 | 1 |
| 135 | 222.75 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 136 | 222.75 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 137 | 222.76 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 138 | 222.76 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 15 | 1 |
| 159 | 223.48 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 3 | 14 |
| 161 | 223.48 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 3 | 14 |
| 162 | 223.58 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 3 | 14 |
| 192 | 224.33 | wind | 3.0 | 43200 | < th | dose independent | rect. | 2 | 1 |
| 199 | 224.40 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 3 | 14 |
| 207 | 224.59 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 211 | 224.69 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 213 | 224.81 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 12 |
| 239 | 225.38 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 1 | 16 |
| 240 | 225.38 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 1 | 16 |
| 243 | 225.45 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 1 | 16 |
| 250 | 225.54 | humidity | 50.0 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 254 | 225.59 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 2 | NA |
| 255 | 225.59 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 2 | NA |
| 259 | 225.65 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 2 | NA |
| 263 | 225.68 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 264 | 225.68 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 12 |
| 275 | 225.75 | humidity | 50.0 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 321 | 226.28 | wind | 3.0 | 43200 | < th | dose independent | sin | 7 | NA |
| 333 | 226.35 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 10 |
| 348 | 226.47 | wind | 1.0 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 354 | 226.52 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 8 |
| 368 | 226.65 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 11 | 1 |
| 375 | 226.71 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 2 |
| 376 | 226.71 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 2 |
| 385 | 226.77 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 4 |
| 386 | 226.77 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 4 |
| 417 | 226.94 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 2 | 18 |
| 418 | 226.94 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 3 | NA |
| 419 | 226.94 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 2 | 18 |
| 421 | 226.96 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 8 |
| 422 | 226.96 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 8 |
| 429 | 227.02 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 2 | 18 |
| 444 | 227.15 | wind | 3.0 | 43200 | > th | dose independent | sin | 7 | NA |
| 451 | 227.24 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 9 | 2 |
| 469 | 227.35 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 9 | 2 |
| 483 | 227.44 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 12 | 5 |
| 497 | 227.53 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 14 | 2 |
| 517 | 227.65 | wind | 5.0 | 43200 | < th | dose dependent | sin | 8 | NA |
| 523 | 227.70 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 3 | 7 |
| 525 | 227.70 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 3 | 7 |
| 542 | 227.81 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 12 | 5 |
| 545 | 227.81 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 12 | 5 |
| 547 | 227.82 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 556 | 227.86 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 4 |
| 566 | 227.90 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 9 | 8 |
| 576 | 227.94 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 1 | 11 |
| 619 | 228.20 | wind | 9.0 | 14400 | < th | dose independent | rect. | 5 | 8 |
| 632 | 228.25 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 634 | 228.26 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 2 |
| 641 | 228.35 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 17 | 2 |
| 649 | 228.38 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 2 |
| 650 | 228.40 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 4 |
| 666 | 228.51 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 669 | 228.51 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 687 | 228.56 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 3 | 9 |
| 700 | 228.65 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 3 | 7 |
| 701 | 228.65 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 708 | 228.68 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 15 | 2 |
| 735 | 228.85 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 3 | 7 |
| 746 | 228.89 | wind | 9.0 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 747 | 228.90 | wind | 9.0 | 43200 | < th | dose independent | rect. | 10 | 4 |
| 749 | 228.91 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 11 | 6 |
| 753 | 228.93 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 761 | 228.98 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 11 | 7 |
| 763 | 229.00 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 11 | 4 |
| 770 | 229.04 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 11 | 1 |
| 774 | 229.05 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 3 | 10 |
| 824 | 229.24 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 833 | 229.29 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 11 | 4 |
| 882 | 229.55 | wind | 9.0 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 883 | 229.55 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 14 | 12 |
| 911 | 229.64 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 11 | 23 |
| 923 | 229.68 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 926 | 229.69 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 11 | 4 |
| 934 | 229.72 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 17 | 16 |
| 958 | 229.76 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 1 | 12 |
| 990 | 229.86 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 3 |
| 993 | 229.87 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 8 | 8 |