BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0762000 Os01g0762000|AK120818
(998 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0762000 Patatin family protein 1886 0.0
Os03g0810900 Patatin family protein 901 0.0
Os04g0146800 Hypothetical protein 84 4e-16
>Os01g0762000 Patatin family protein
Length = 998
Score = 1886 bits (4886), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 922/998 (92%), Positives = 922/998 (92%)
Query: 1 MDAISSEAPVGVFAIGPSTXXXXXXXXXXXXCGSLGXXXXXXXXXXXXXXXXXXGWLHPR 60
MDAISSEAPVGVFAIGPST CGSLG GWLHPR
Sbjct: 1 MDAISSEAPVGVFAIGPSTALGRALALRVLLCGSLGRLRHRLAAALRAALPVAAGWLHPR 60
Query: 61 DNTRGIXXXXXXXXXXXXXXXXXXXXXXXXXXXQSAYRRKFWRNMMRAALTYEEWAHAAR 120
DNTRGI QSAYRRKFWRNMMRAALTYEEWAHAAR
Sbjct: 61 DNTRGILLAVCAVALLLRVRGRGGGRAGVRARVQSAYRRKFWRNMMRAALTYEEWAHAAR 120
Query: 121 MLDRETPRRATDADLYDEELVRNKLRELRHRRQEGSLRDIVFCMRADLLRNLGNMCNSEL 180
MLDRETPRRATDADLYDEELVRNKLRELRHRRQEGSLRDIVFCMRADLLRNLGNMCNSEL
Sbjct: 121 MLDRETPRRATDADLYDEELVRNKLRELRHRRQEGSLRDIVFCMRADLLRNLGNMCNSEL 180
Query: 181 HKGRLQVPKLIKEYIEEVSTQLKMVCNSDSDDLPLEEKLAFMHETRHAFGRTXXXXXXXX 240
HKGRLQVPKLIKEYIEEVSTQLKMVCNSDSDDLPLEEKLAFMHETRHAFGRT
Sbjct: 181 HKGRLQVPKLIKEYIEEVSTQLKMVCNSDSDDLPLEEKLAFMHETRHAFGRTALLLSGGA 240
Query: 241 XXXCFHVGVVKTLVEHKLLPRIISGSSVGSIMCSIVATRSWPELESFFEEWHSLKFFDQM 300
CFHVGVVKTLVEHKLLPRIISGSSVGSIMCSIVATRSWPELESFFEEWHSLKFFDQM
Sbjct: 241 SLGCFHVGVVKTLVEHKLLPRIISGSSVGSIMCSIVATRSWPELESFFEEWHSLKFFDQM 300
Query: 301 GGIFPVVKRILTHGAVHDIRHLQTLLRNLTSNLTFQEAYDMTGRILVVTVCSPRKHEPPR 360
GGIFPVVKRILTHGAVHDIRHLQTLLRNLTSNLTFQEAYDMTGRILVVTVCSPRKHEPPR
Sbjct: 301 GGIFPVVKRILTHGAVHDIRHLQTLLRNLTSNLTFQEAYDMTGRILVVTVCSPRKHEPPR 360
Query: 361 CLNYLTSPHVLIWSAVTASCAFPGLFEAQELMAKDRFGETVPFHAPFLLGLEERVGATTR 420
CLNYLTSPHVLIWSAVTASCAFPGLFEAQELMAKDRFGETVPFHAPFLLGLEERVGATTR
Sbjct: 361 CLNYLTSPHVLIWSAVTASCAFPGLFEAQELMAKDRFGETVPFHAPFLLGLEERVGATTR 420
Query: 421 RWRDGSLESDLPMKQLKELFNVNHFIVSQANPHIAPLLRLKEIIRAYGGSFAAKLAELAE 480
RWRDGSLESDLPMKQLKELFNVNHFIVSQANPHIAPLLRLKEIIRAYGGSFAAKLAELAE
Sbjct: 421 RWRDGSLESDLPMKQLKELFNVNHFIVSQANPHIAPLLRLKEIIRAYGGSFAAKLAELAE 480
Query: 481 MEVKHRCNQILELGFPLGGIAKLFAQDWEGDVTVVMPATLAQYSKIIQNPSYAELQKAAN 540
MEVKHRCNQILELGFPLGGIAKLFAQDWEGDVTVVMPATLAQYSKIIQNPSYAELQKAAN
Sbjct: 481 MEVKHRCNQILELGFPLGGIAKLFAQDWEGDVTVVMPATLAQYSKIIQNPSYAELQKAAN 540
Query: 541 QGRRCTWEKLSAIRANCAIELVLDECVALLNHMRRLKRSAERAAASQGHGPTIRLCPSRR 600
QGRRCTWEKLSAIRANCAIELVLDECVALLNHMRRLKRSAERAAASQGHGPTIRLCPSRR
Sbjct: 541 QGRRCTWEKLSAIRANCAIELVLDECVALLNHMRRLKRSAERAAASQGHGPTIRLCPSRR 600
Query: 601 IPSWNLIARENSSGSLEEEFLISPRTNHHADGGIAGPSNKNHHVQQNVHDGSDSESESID 660
IPSWNLIARENSSGSLEEEFLISPRTNHHADGGIAGPSNKNHHVQQNVHDGSDSESESID
Sbjct: 601 IPSWNLIARENSSGSLEEEFLISPRTNHHADGGIAGPSNKNHHVQQNVHDGSDSESESID 660
Query: 661 LNSWTRSGGPLMRTASANKFVSFVQNLEIDTEFRTISSREDRTDVVTPNANFLVSQAIGR 720
LNSWTRSGGPLMRTASANKFVSFVQNLEIDTEFRTISSREDRTDVVTPNANFLVSQAIGR
Sbjct: 661 LNSWTRSGGPLMRTASANKFVSFVQNLEIDTEFRTISSREDRTDVVTPNANFLVSQAIGR 720
Query: 721 ESVDNSAMPITPDRSLGNSGYDPHDSNVPRSPFGCSTSIMVSEGDLLQPEKIENGILFNV 780
ESVDNSAMPITPDRSLGNSGYDPHDSNVPRSPFGCSTSIMVSEGDLLQPEKIENGILFNV
Sbjct: 721 ESVDNSAMPITPDRSLGNSGYDPHDSNVPRSPFGCSTSIMVSEGDLLQPEKIENGILFNV 780
Query: 781 VKRDTLLTPTGGVELQGTSQEPDVETIQTECLXXXXXXXXVGLNAGDEAAIDPRANMSSQ 840
VKRDTLLTPTGGVELQGTSQEPDVETIQTECL VGLNAGDEAAIDPRANMSSQ
Sbjct: 781 VKRDTLLTPTGGVELQGTSQEPDVETIQTECLDDASDDDDVGLNAGDEAAIDPRANMSSQ 840
Query: 841 NTQHQGSSLENINLSSSVDCEAETITSKSKGSSLFDIGMEIRPTILSTESSMYERSSAKI 900
NTQHQGSSLENINLSSSVDCEAETITSKSKGSSLFDIGMEIRPTILSTESSMYERSSAKI
Sbjct: 841 NTQHQGSSLENINLSSSVDCEAETITSKSKGSSLFDIGMEIRPTILSTESSMYERSSAKI 900
Query: 901 GLRTVHAEFISNPGAGKGEVDSGAANKEFSYFSQTADTVIFSESCETGQHHEVNVEALTS 960
GLRTVHAEFISNPGAGKGEVDSGAANKEFSYFSQTADTVIFSESCETGQHHEVNVEALTS
Sbjct: 901 GLRTVHAEFISNPGAGKGEVDSGAANKEFSYFSQTADTVIFSESCETGQHHEVNVEALTS 960
Query: 961 YPVSVLEDDRSGGFNLSEIMATTFIAEADAPISRRDEV 998
YPVSVLEDDRSGGFNLSEIMATTFIAEADAPISRRDEV
Sbjct: 961 YPVSVLEDDRSGGFNLSEIMATTFIAEADAPISRRDEV 998
>Os03g0810900 Patatin family protein
Length = 820
Score = 901 bits (2329), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/688 (66%), Positives = 539/688 (78%), Gaps = 22/688 (3%)
Query: 103 RNMMRAALTYEEWAHAARMLDRETPRRATDADLYDEELVRNKLRELRHRRQEGSLRDIVF 162
+ MR A +YEEWA AA++LD+ + + +++D YDEEL+RN+L ELR RR+EGSLRD+VF
Sbjct: 99 KKAMRYAASYEEWARAAKVLDKMS-EQVSESDFYDEELIRNRLEELRRRREEGSLRDVVF 157
Query: 163 CMRADLLRNLGNMCNSELHKGRLQVPKLIKEYIEEVSTQLKMVCNSDSDDLPLEEKLAFM 222
CMR DL+RNLGNMCN ELHKGRL+VPKLIK+YI+EVS QLKMVC SD+DDL LEEKLAF+
Sbjct: 158 CMRGDLVRNLGNMCNPELHKGRLEVPKLIKDYIDEVSAQLKMVCESDTDDLLLEEKLAFV 217
Query: 223 HETRHAFGRTXXXXXXXXXXXCFHVGVVKTLVEHKLLPRIISGSSVGSIMCSIVATRSWP 282
ETRHAFGRT FHVGVVKTLVEHKLLPRI++GSSVGSI+CSIVATR+WP
Sbjct: 218 QETRHAFGRTALLLSGGASLGSFHVGVVKTLVEHKLLPRIVAGSSVGSIICSIVATRTWP 277
Query: 283 ELESFF-EEWHSLKFFDQMGGIFPVVKRILTHGAVHDIRHLQTLLRNLTSNLTFQEAYDM 341
E++SFF + +L+FFD++GGIF V KR++T+GA+HDI +Q LLR+LT NLTFQEAYDM
Sbjct: 278 EIQSFFVDSLQTLQFFDRIGGIFAVTKRVMTYGALHDISQMQRLLRDLTGNLTFQEAYDM 337
Query: 342 TGRILVVTVCSPRKHEPPRCLNYLTSPHVLIWSAVTASCAFPGLFEAQELMAKDRFGETV 401
TGR+L VTVCSPRK+EPPRCLNYLTSPHV+IWSAVTASCAFPGLFEAQELMAK+RFGE V
Sbjct: 338 TGRVLGVTVCSPRKNEPPRCLNYLTSPHVVIWSAVTASCAFPGLFEAQELMAKNRFGEIV 397
Query: 402 PFHAPFLLGLEERVGATTRRWRDGSLESDLPMKQLKELFNVNHFIVSQANPHIAPLLRLK 461
PFHAPF E+ GA+ RRWRDGSLE DLPM QLKELFNVNHFIVSQ NPHI+PLLRLK
Sbjct: 398 PFHAPFSTDPEQGPGASKRRWRDGSLEMDLPMMQLKELFNVNHFIVSQTNPHISPLLRLK 457
Query: 462 EIIRAYGGSFAAKLAELAEMEVKHRCNQILELGFPLGGIAKLFAQDWEGDVTVVMPATLA 521
EI+ YGG FA KLA LAEMEVK+RCNQILE+G PLGG+AKLFAQDWEGDVT+VMPAT A
Sbjct: 458 EIVTTYGGRFAGKLARLAEMEVKYRCNQILEIGLPLGGLAKLFAQDWEGDVTMVMPATAA 517
Query: 522 QYSKIIQNPSYAELQKAANQGRRCTWEKLSAIRANCAIELVLDECVALLNHMRRLKRSAE 581
QY KIIQNP+YAELQ AANQGRRCTWEK+SAIR NCAIEL LDE +A+LNH RRLKRS E
Sbjct: 518 QYLKIIQNPTYAELQMAANQGRRCTWEKISAIRTNCAIELALDESIAVLNHKRRLKRSME 577
Query: 582 R-AAASQGHGPTIRLCPSRRIPSWNLIARENSSGSLEEEFLISPRTNHHADGGIAGPSNK 640
R A+ASQG+ + + RR+PSW+ I+RENS+GSL E+ + ++ H + N
Sbjct: 578 RVASASQGYTCSSVIRTPRRVPSWSCISRENSTGSLSEDCFATTSSSTHQGIQVVATPNV 637
Query: 641 NHHVQQNVHDGSDSESESIDLNSWTRSGGPLMRTASANKFVSFVQNLEIDTEFRT-ISSR 699
H +DGS+SESE+IDLNSWTRSGGPLMRT+SA+ F++F+QNLEI++EF T SS
Sbjct: 638 IH------NDGSESESETIDLNSWTRSGGPLMRTSSADMFINFIQNLEIESEFNTGNSSG 691
Query: 700 EDRTDVVTPNANFLVSQAIGRESVDNSAMPITPDRSLGNSGYDPHDSNVPRSPFGCSTSI 759
+ PN N V+ S D S T + GN N+ P STSI
Sbjct: 692 STVSKDSCPNNNSGVTAQGTDRSTDTSE---TGSCNTGN--------NIASQP-STSTSI 739
Query: 760 MVSEGDLLQPEKIENGILFNVVKRDTLL 787
VSEG+LLQPE+ NGIL NVVKR ++
Sbjct: 740 AVSEGELLQPERSTNGILINVVKRKSVF 767
>Os04g0146800 Hypothetical protein
Length = 230
Score = 84.3 bits (207), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/64 (65%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 118 AARMLDRETPRRATDADLYDEELVRNKLRELRHRRQEGSLRDIVFCMRADLLRNLGNMCN 177
AR D PR +A+LY +EL+R KLRELRHR QEGSL D VFC+RADLLRNLGN CN
Sbjct: 138 GARRAD-AGPRDPINANLYVKELMRKKLRELRHRCQEGSLGDNVFCVRADLLRNLGNTCN 196
Query: 178 SELH 181
S++H
Sbjct: 197 SKIH 200
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.317 0.132 0.389
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 31,115,447
Number of extensions: 1248022
Number of successful extensions: 2959
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 2952
Number of HSP's successfully gapped: 3
Length of query: 998
Length of database: 17,035,801
Length adjustment: 111
Effective length of query: 887
Effective length of database: 11,240,047
Effective search space: 9969921689
Effective search space used: 9969921689
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 161 (66.6 bits)