Os01g0762000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Patatin family protein.
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Os01g0762000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Patatin family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 45.99 | 0.319 | 8.46 | 0.989 | 1.35 | -0.938 | -0.867 | -0.506 | 0.309 | 0.624 | 79 | 1326 | -- | -- |
| 45.54 | 0.314 | 8.46 | 1.08 | 1.33 | -0.838 | -0.762 | -- | 0.326 | 0.578 | 76 | 1400 | -- | -- |
| 48.96 | 0.326 | 8.47 | 1.01 | 1.42 | -0.913 | -- | -0.827 | 0.305 | 0.515 | 77.65 | 1241 | -- | -- |
| 48.6 | 0.325 | 8.45 | 1.11 | 1.29 | -0.843 | -- | -- | 0.35 | 0.528 | 75.13 | 1401 | -- | -- |
| 94.38 | 0.455 | 8.45 | 1.15 | -- | -0.79 | -- | 0.38 | 0.283 | -- | 77.65 | 1241 | -- | -- |
| 57.99 | 0.357 | 8.47 | 0.978 | 1.27 | -- | -0.978 | -- | 0.272 | 0.499 | -- | -- | -- | -- |
| 62.08 | 0.369 | 8.47 | 1.02 | 1.27 | -- | -- | -- | 0.277 | 0.438 | -- | -- | -- | -- |
| 93.76 | 0.451 | 8.44 | 1.07 | -- | -0.816 | -- | -- | 0.273 | -- | 78 | 9 | -- | -- |
| 80.31 | 0.417 | 8.49 | -- | 1.29 | -0.717 | -- | -- | 0.208 | 0.453 | 76 | 1429 | -- | -- |
| 163.87 | 0.598 | 8.44 | 1.06 | -- | -- | -- | -- | 0.298 | -- | -- | -- | -- | -- |
| 89.29 | 0.442 | 8.49 | -- | 1.29 | -- | -- | -- | 0.164 | 0.478 | -- | -- | -- | -- |
| 126.45 | 0.524 | 8.49 | -- | -- | -0.784 | -- | -- | 0.159 | -- | 78 | 43 | -- | -- |
| 193.48 | 0.649 | 8.47 | -- | -- | -- | -- | -- | 0.18 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 43.51 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 3 | 12 |
| 2 | 43.53 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 1 | 14 |
| 19 | 43.87 | humidity | 80.0 | 1440 | < th | dose independent | sin | 3 | NA |
| 22 | 43.88 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 3 | 12 |
| 36 | 44.02 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 1 | 14 |
| 50 | 44.25 | humidity | 80.0 | 1440 | > th | dose independent | sin | 3 | NA |
| 86 | 44.73 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 91 | 44.77 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 9 | 5 |
| 103 | 44.97 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 126 | 45.16 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 206 | 45.89 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 5 | 10 |
| 216 | 45.94 | radiation | 30.0 | 1440 | < th | dose dependent | rect. | 21 | 8 |
| 236 | 46.02 | humidity | 80.0 | 720 | > th | dose independent | rect. | 9 | 13 |
| 279 | 46.22 | humidity | 70.0 | 1440 | > th | dose dependent | sin | 1 | NA |
| 337 | 46.49 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 6 | 20 |
| 364 | 46.56 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 3 |
| 369 | 46.56 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 3 |
| 377 | 46.58 | humidity | 80.0 | 1440 | < th | dose independent | no | NA | NA |
| 388 | 46.61 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 3 |
| 413 | 46.65 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 13 | 23 |
| 423 | 46.68 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 8 | 16 |
| 459 | 46.80 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 6 | 22 |
| 462 | 46.81 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 6 | 20 |
| 488 | 46.84 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 3 |
| 503 | 46.88 | humidity | 80.0 | 1440 | > th | dose independent | no | NA | NA |
| 524 | 46.91 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 13 | 23 |
| 540 | 46.94 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 21 | 8 |
| 559 | 46.97 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 23 |
| 692 | 47.25 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 23 |
| 702 | 47.26 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 7 | 10 |
| 703 | 47.26 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 2 | 12 |
| 877 | 47.48 | humidity | 90.0 | 1440 | < th | dose dependent | sin | 4 | NA |