Os03g0810900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Patatin family protein.
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Os03g0810900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Patatin family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 65.45 | 0.38 | 8.46 | -0.165 | 0.0826 | -1.76 | 1.08 | -1.1 | 0.0172 | 15.4 | 23.19 | 731 | -- | -- |
| 66.96 | 0.381 | 8.47 | -0.233 | 0.087 | -1.52 | 1 | -- | 0.0332 | 15.7 | 23.6 | 730 | -- | -- |
| 66.4 | 0.38 | 8.47 | -0.16 | 0.276 | -1.61 | -- | -0.813 | 0.0387 | 19.4 | 23.2 | 746 | -- | -- |
| 67.26 | 0.382 | 8.48 | -0.236 | 0.245 | -1.47 | -- | -- | 0.0194 | 19.3 | 23.49 | 772 | -- | -- |
| 69.36 | 0.388 | 8.47 | -0.171 | -- | -1.77 | -- | -0.935 | 0.0137 | -- | 23.1 | 669 | -- | -- |
| 96.01 | 0.459 | 8.43 | 0.115 | 0.391 | -- | -0.313 | -- | 0.261 | 21.2 | -- | -- | -- | -- |
| 96.25 | 0.459 | 8.43 | 0.128 | 0.399 | -- | -- | -- | 0.262 | 20.8 | -- | -- | -- | -- |
| 70.42 | 0.391 | 8.48 | -0.292 | -- | -1.58 | -- | -- | -0.0133 | -- | 23.5 | 687 | -- | -- |
| 68.84 | 0.386 | 8.47 | -- | 0.243 | -1.38 | -- | -- | 0.026 | 19.9 | 23.64 | 720 | -- | -- |
| 105.28 | 0.479 | 8.42 | 0.127 | -- | -- | -- | -- | 0.259 | -- | -- | -- | -- | -- |
| 96.68 | 0.46 | 8.43 | -- | 0.399 | -- | -- | -- | 0.248 | 20.8 | -- | -- | -- | -- |
| 72.35 | 0.396 | 8.48 | -- | -- | -1.36 | -- | -- | 0.00313 | -- | 25.1 | 670 | -- | -- |
| 105.7 | 0.48 | 8.42 | -- | -- | -- | -- | -- | 0.245 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 60.23 | temperature | 25 | 720 | < th | dose dependent | rect. | 21 | 15 |
| 4 | 60.46 | temperature | 25 | 720 | < th | dose dependent | sin | 8 | NA |
| 42 | 61.89 | temperature | 25 | 720 | < th | dose dependent | rect. | 23 | 6 |
| 49 | 61.97 | temperature | 25 | 720 | < th | dose dependent | rect. | 23 | 8 |
| 57 | 62.14 | temperature | 25 | 720 | < th | dose dependent | rect. | 24 | 3 |
| 87 | 62.66 | temperature | 10 | 720 | > th | dose dependent | sin | 7 | NA |
| 91 | 62.71 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 17 |
| 108 | 62.96 | temperature | 10 | 720 | > th | dose dependent | rect. | 22 | 9 |
| 137 | 63.33 | temperature | 15 | 720 | > th | dose dependent | rect. | 21 | 12 |
| 145 | 63.40 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 14 |
| 217 | 64.11 | temperature | 15 | 720 | > th | dose dependent | rect. | 1 | 8 |
| 282 | 64.73 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 18 |
| 303 | 64.94 | temperature | 20 | 720 | < th | dose dependent | rect. | 3 | 2 |
| 305 | 64.98 | temperature | 20 | 720 | < th | dose independent | sin | 7 | NA |
| 310 | 65.00 | temperature | 20 | 720 | < th | dose independent | rect. | 23 | 12 |
| 328 | 65.12 | temperature | 20 | 720 | < th | dose independent | rect. | 23 | 14 |
| 409 | 65.62 | temperature | 20 | 720 | < th | dose independent | rect. | 24 | 7 |
| 430 | 65.77 | temperature | 20 | 720 | > th | dose independent | sin | 6 | NA |
| 476 | 66.05 | temperature | 20 | 720 | > th | dose independent | rect. | 2 | 22 |
| 504 | 66.23 | temperature | 20 | 720 | > th | dose independent | rect. | 19 | 14 |
| 505 | 66.24 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 536 | 66.40 | temperature | 20 | 720 | < th | dose independent | rect. | 24 | 4 |
| 561 | 66.52 | temperature | 20 | 720 | > th | dose independent | rect. | 1 | 15 |
| 655 | 67.01 | temperature | 20 | 720 | > th | dose independent | rect. | 1 | 8 |
| 778 | 67.59 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 786 | 67.64 | temperature | 20 | 720 | > th | dose independent | rect. | 12 | 19 |
| 840 | 67.87 | temperature | 20 | 720 | > th | dose independent | rect. | 23 | 23 |
| 891 | 68.08 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 23 |
| 904 | 68.13 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 5 |
| 926 | 68.22 | temperature | 25 | 270 | < th | dose dependent | rect. | 7 | 3 |
| 1000 | 68.56 | temperature | 20 | 720 | < th | dose independent | rect. | 3 | 1 |