BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os01g0760900 Os01g0760900|AK107573
         (254 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os01g0760900  Conserved hypothetical protein                      522   e-149
Os05g0585400  Conserved hypothetical protein                       89   4e-18
Os01g0622700  Conserved hypothetical protein                       83   1e-16
Os01g0236400  Conserved hypothetical protein                       75   6e-14

>Os01g0760900 Conserved hypothetical protein
          Length = 254

 Score =  522 bits (1345), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 254/254 (100%), Positives = 254/254 (100%)

Query: 1   MEVAEAGVDGVAGRRQQEEASGAAPFGRSSSLIGAAGFDGALRELKDLRSQLHQTADCCE 60
           MEVAEAGVDGVAGRRQQEEASGAAPFGRSSSLIGAAGFDGALRELKDLRSQLHQTADCCE
Sbjct: 1   MEVAEAGVDGVAGRRQQEEASGAAPFGRSSSLIGAAGFDGALRELKDLRSQLHQTADCCE 60

Query: 61  KAFLDTEKKKLILESTKGYICDAIVAVIDHLGTVSSKLEQQLQEKIEITQTEKKLNFLKQ 120
           KAFLDTEKKKLILESTKGYICDAIVAVIDHLGTVSSKLEQQLQEKIEITQTEKKLNFLKQ
Sbjct: 61  KAFLDTEKKKLILESTKGYICDAIVAVIDHLGTVSSKLEQQLQEKIEITQTEKKLNFLKQ 120

Query: 121 RLLTCEQYAITLKLLTVRGDNDAIQYHRRYLSQSTGGTKEENGANSRKDDVKFVEYNSPT 180
           RLLTCEQYAITLKLLTVRGDNDAIQYHRRYLSQSTGGTKEENGANSRKDDVKFVEYNSPT
Sbjct: 121 RLLTCEQYAITLKLLTVRGDNDAIQYHRRYLSQSTGGTKEENGANSRKDDVKFVEYNSPT 180

Query: 181 IPGAILTFKPYDIQSTIGRERSVATTDSESPTTDAKSSFSFRAEDVPIVLAEHRKKANHG 240
           IPGAILTFKPYDIQSTIGRERSVATTDSESPTTDAKSSFSFRAEDVPIVLAEHRKKANHG
Sbjct: 181 IPGAILTFKPYDIQSTIGRERSVATTDSESPTTDAKSSFSFRAEDVPIVLAEHRKKANHG 240

Query: 241 SNILSFIRKGRRHA 254
           SNILSFIRKGRRHA
Sbjct: 241 SNILSFIRKGRRHA 254



>Os05g0585400 Conserved hypothetical protein
          Length = 302

 Score = 88.6 bits (218), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 46/128 (35%), Positives = 78/128 (60%), Gaps = 1/128 (0%)

Query: 30  SSLIGAAGFDGALRELKDLRSQLHQTADCCEKAFLDTEKKKLILESTKGYICDAIVAVID 89
           +S+  +  F  AL+ELK+LR QL+  ++ CEK++L +E+K+++LE+ K Y   A+V  +D
Sbjct: 27  ASMERSKSFVKALQELKNLRPQLYSASEYCEKSYLHSEQKQMVLENLKDYAVRAVVNAVD 86

Query: 90  HLGTVSSKLEQQL-QEKIEITQTEKKLNFLKQRLLTCEQYAITLKLLTVRGDNDAIQYHR 148
           HLGTV+ KL     Q+  E++  E K+  L Q++LTC+ +     L   +      ++H+
Sbjct: 87  HLGTVAYKLTDLFEQQASEVSTVELKVARLNQQILTCQIFTDRAGLRQQKIGGTTFKHHK 146

Query: 149 RYLSQSTG 156
            Y+  STG
Sbjct: 147 HYILPSTG 154



>Os01g0622700 Conserved hypothetical protein
          Length = 306

 Score = 83.2 bits (204), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 43/123 (34%), Positives = 76/123 (61%), Gaps = 1/123 (0%)

Query: 30  SSLIGAAGFDGALRELKDLRSQLHQTADCCEKAFLDTEKKKLILESTKGYICDAIVAVID 89
           +S+  +  F  AL+ELK+LR QL+  ++ CEK++L +E+K+++L++ K Y   A+V  +D
Sbjct: 36  ASMERSKSFVKALQELKNLRPQLYSASEYCEKSYLHSEQKQMVLDNLKDYAVRALVNAVD 95

Query: 90  HLGTVSSKLEQQL-QEKIEITQTEKKLNFLKQRLLTCEQYAITLKLLTVRGDNDAIQYHR 148
           HLGTV+ KL     Q+  E++  E K+  L Q++LTC+ Y     +   +    A ++H+
Sbjct: 96  HLGTVAYKLTDLYEQQASEVSTLELKVACLNQQVLTCQTYTDKEGIRQQQMTGTATRHHK 155

Query: 149 RYL 151
            Y+
Sbjct: 156 HYI 158



>Os01g0236400 Conserved hypothetical protein
          Length = 317

 Score = 74.7 bits (182), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 77/127 (60%), Gaps = 9/127 (7%)

Query: 30  SSLIGAAGFDGALRELKDLRSQLHQTADCCEKAFLDTEKKKLILESTKGYICDAIVAVID 89
           SSL     F  +L++L++LRSQL+  A+  E  + +  +K  ++ S K Y  +A+V+ +D
Sbjct: 28  SSLQEGLLFSDSLKDLRNLRSQLYSAAEYFEVFYRNNSQKSTVMTSLKDYTVEALVSTVD 87

Query: 90  HLGTVSSKLEQQLQEKI-EITQTEKKLNFLKQRLLTCEQY----AITLKLLTVRGDNDAI 144
           HLG VS K++  ++E+  E+ +TE +++ ++QR+  C+Q       + + L +R    A 
Sbjct: 88  HLGFVSYKVDNLVKERSDEVNETEFRVSSVEQRVRICQQTIDQEGRSQQSLLIR----AP 143

Query: 145 QYHRRYL 151
           +YHRRY+
Sbjct: 144 KYHRRYI 150



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.314    0.130    0.359 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 7,961,433
Number of extensions: 314398
Number of successful extensions: 802
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 800
Number of HSP's successfully gapped: 4
Length of query: 254
Length of database: 17,035,801
Length adjustment: 99
Effective length of query: 155
Effective length of database: 11,866,615
Effective search space: 1839325325
Effective search space used: 1839325325
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 155 (64.3 bits)