Os01g0760900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0760900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 297.24 | 0.81 | 4.42 | -0.717 | 0.604 | 1.11 | 1.11 | 2.72 | -0.746 | 8.64 | 22.09 | 4267 | -- | -- |
| 300.06 | 0.807 | 4.48 | -1.42 | 0.601 | 1.31 | 1.37 | -- | -0.79 | 8.14 | 25.18 | 4459 | -- | -- |
| 300.45 | 0.807 | 4.44 | -0.736 | 0.595 | 1.15 | -- | 2.57 | -0.781 | 9.29 | 22.14 | 4279 | -- | -- |
| 302.83 | 0.81 | 4.49 | -1.39 | 0.639 | 1.36 | -- | -- | -0.799 | 9.5 | 24.79 | 4188 | -- | -- |
| 321.25 | 0.835 | 4.43 | -0.674 | -- | 1.11 | -- | 2.73 | -0.74 | -- | 21.9 | 4363 | -- | -- |
| 351.26 | 0.879 | 4.47 | -0.989 | 0.566 | -- | 1.53 | -- | -0.735 | 7.69 | -- | -- | -- | -- |
| 356.15 | 0.884 | 4.47 | -0.944 | 0.578 | -- | -- | -- | -0.733 | 8.82 | -- | -- | -- | -- |
| 325.14 | 0.84 | 4.49 | -1.35 | -- | 1.27 | -- | -- | -0.75 | -- | 25.7 | 4375 | -- | -- |
| 346.76 | 0.867 | 4.43 | -- | 0.603 | 0.958 | -- | -- | -0.526 | 9.33 | 27.9 | 4218 | -- | -- |
| 375.17 | 0.905 | 4.49 | -0.943 | -- | -- | -- | -- | -0.728 | -- | -- | -- | -- | -- |
| 379.62 | 0.911 | 4.45 | -- | 0.576 | -- | -- | -- | -0.628 | 8.94 | -- | -- | -- | -- |
| 368.26 | 0.894 | 4.44 | -- | -- | 0.912 | -- | -- | -0.525 | -- | 28.01 | 4366 | -- | -- |
| 398.63 | 0.932 | 4.46 | -- | -- | -- | -- | -- | -0.624 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 296.09 | temperature | 20 | 4320 | > th | dose dependent | rect. | 6 | 1 |
| 2 | 296.63 | temperature | 25 | 4320 | > th | dose dependent | rect. | 11 | 2 |
| 3 | 296.70 | temperature | 20 | 4320 | > th | dose dependent | rect. | 1 | 14 |
| 30 | 297.14 | temperature | 20 | 4320 | > th | dose dependent | sin | 4 | NA |
| 32 | 297.16 | temperature | 25 | 4320 | > th | dose dependent | rect. | 10 | 5 |
| 37 | 297.18 | temperature | 25 | 4320 | > th | dose independent | rect. | 6 | 6 |
| 155 | 297.73 | temperature | 20 | 4320 | > th | dose dependent | rect. | 3 | 6 |
| 187 | 297.83 | temperature | 25 | 4320 | < th | dose independent | rect. | 6 | 6 |
| 210 | 297.89 | temperature | 10 | 4320 | > th | dose dependent | rect. | 4 | 11 |
| 448 | 298.27 | temperature | 20 | 4320 | > th | dose dependent | no | NA | NA |
| 498 | 298.37 | temperature | 25 | 4320 | > th | dose dependent | rect. | 16 | 1 |
| 527 | 298.41 | temperature | 25 | 4320 | > th | dose dependent | rect. | 14 | 3 |
| 536 | 298.41 | temperature | 25 | 4320 | > th | dose dependent | rect. | 14 | 23 |
| 559 | 298.47 | temperature | 25 | 4320 | > th | dose independent | rect. | 7 | 2 |
| 593 | 298.56 | temperature | 25 | 4320 | < th | dose independent | rect. | 3 | 10 |
| 631 | 298.64 | temperature | 25 | 4320 | > th | dose independent | rect. | 6 | 18 |
| 754 | 298.87 | temperature | 25 | 4320 | > th | dose independent | rect. | 3 | 21 |
| 803 | 298.96 | temperature | 25 | 4320 | < th | dose independent | rect. | 5 | 19 |
| 833 | 299.02 | temperature | 25 | 4320 | > th | dose independent | sin | 4 | NA |
| 848 | 299.05 | temperature | 25 | 4320 | < th | dose independent | rect. | 3 | 21 |
| 922 | 299.17 | temperature | 25 | 4320 | < th | dose independent | sin | 4 | NA |
| 949 | 299.21 | temperature | 25 | 4320 | < th | dose independent | rect. | 18 | 1 |
| 979 | 299.27 | temperature | 25 | 4320 | > th | dose independent | rect. | 18 | 22 |