BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0717700 Os01g0717700|AK064938
(484 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0717700 EGF-like, alliinase domain containing protein 972 0.0
Os01g0717400 EGF-like, alliinase domain containing protein 825 0.0
Os05g0169300 Allinase, C-terminal domain containing protein 238 5e-63
Os01g0169800 Allinase, C-terminal domain containing protein 145 8e-35
>Os01g0717700 EGF-like, alliinase domain containing protein
Length = 484
Score = 972 bits (2512), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 470/484 (97%), Positives = 470/484 (97%)
Query: 1 METGRHRSQSLGSAGLAFHALLCSSLLLNAVFFAHHLLRSSPTATPERLGDGLSWXXXXX 60
METGRHRSQSLGSAGLAFHALLCSSLLLNAVFFAHHLLRSSPTATPERLGDGLSW
Sbjct: 1 METGRHRSQSLGSAGLAFHALLCSSLLLNAVFFAHHLLRSSPTATPERLGDGLSWALQAA 60
Query: 61 XXXXXXXXXDCSGHGNVFLDGVTGEDGRPGCECNRCFSGPDCSVRTPNCTADADSGNPLF 120
DCSGHGNVFLDGVTGEDGRPGCECNRCFSGPDCSVRTPNCTADADSGNPLF
Sbjct: 61 REAEAVAAADCSGHGNVFLDGVTGEDGRPGCECNRCFSGPDCSVRTPNCTADADSGNPLF 120
Query: 121 LEPYWRRHAAASAVVFSGWHRLSYITTGGRFHSVELDRHIRLLHRAVGNAVVDDKYLVFG 180
LEPYWRRHAAASAVVFSGWHRLSYITTGGRFHSVELDRHIRLLHRAVGNAVVDDKYLVFG
Sbjct: 121 LEPYWRRHAAASAVVFSGWHRLSYITTGGRFHSVELDRHIRLLHRAVGNAVVDDKYLVFG 180
Query: 181 AGSMQLINALVYALSPDGNADSPPASVVATVPYYPAYKSQTDMFDGREYRWDGTTATWSN 240
AGSMQLINALVYALSPDGNADSPPASVVATVPYYPAYKSQTDMFDGREYRWDGTTATWSN
Sbjct: 181 AGSMQLINALVYALSPDGNADSPPASVVATVPYYPAYKSQTDMFDGREYRWDGTTATWSN 240
Query: 241 NGSRNSTKGFIEFVTSPNNPDTALRKPVLAGSSAIVDHAYYWPHLTHIPAPADEDVMLFT 300
NGSRNSTKGFIEFVTSPNNPDTALRKPVLAGSSAIVDHAYYWPHLTHIPAPADEDVMLFT
Sbjct: 241 NGSRNSTKGFIEFVTSPNNPDTALRKPVLAGSSAIVDHAYYWPHLTHIPAPADEDVMLFT 300
Query: 301 ASKLSGHAGSRFGWALIRDEKVAKRALSYVEQSIMGASRDTQLRMLKILKVILANLHGKE 360
ASKLSGHAGSRFGWALIRDEKVAKRALSYVEQSIMGASRDTQLRMLKILKVILANLHGKE
Sbjct: 301 ASKLSGHAGSRFGWALIRDEKVAKRALSYVEQSIMGASRDTQLRMLKILKVILANLHGKE 360
Query: 361 DIFAFGYDVMRSRWRRLNAVVSRSTRISLQKIPPQYCTYFNRIKEPSPAYAWVKCEWEED 420
DIFAFGYDVMRSRWRRLNAVVSRSTRISLQKIPPQYCTYFNRIKEPSPAYAWVKCEWEED
Sbjct: 361 DIFAFGYDVMRSRWRRLNAVVSRSTRISLQKIPPQYCTYFNRIKEPSPAYAWVKCEWEED 420
Query: 421 VDCYETLLAAGIISRSGTLSEAEARYTRMSLLKAQDDFDVLLERITEFVDAEEHGRAPGG 480
VDCYETLLAAGIISRSGTLSEAEARYTRMSLLKAQDDFDVLLERITEFVDAEEHGRAPGG
Sbjct: 421 VDCYETLLAAGIISRSGTLSEAEARYTRMSLLKAQDDFDVLLERITEFVDAEEHGRAPGG 480
Query: 481 SSSM 484
SSSM
Sbjct: 481 SSSM 484
>Os01g0717400 EGF-like, alliinase domain containing protein
Length = 485
Score = 825 bits (2131), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/485 (81%), Positives = 420/485 (86%), Gaps = 1/485 (0%)
Query: 1 METGRHRSQSLGSAGLAFHALLCSSLLLNAVFFAHHLLRSSPTATPERLGDGLSWXXXXX 60
M G HRSQSL SAGL H LLCSSLLLNAVF AH L +SP ATPERLGDGLSW
Sbjct: 1 MAIGWHRSQSLASAGLGLHVLLCSSLLLNAVFIAHQFLGASPPATPERLGDGLSWALQAA 60
Query: 61 XXXXXXXXXDCSGHGNVFLDGVTGEDGRPGCECNRCFSGPDCSVRTPNCTADADSGNPLF 120
DCSGHG+VFLDGVTGEDGRPGCECN CFSGPDCSVR PNC AD G+PLF
Sbjct: 61 KEAEDVAAVDCSGHGSVFLDGVTGEDGRPGCECNSCFSGPDCSVRIPNCAADGQGGDPLF 120
Query: 121 LEPYWRRHAAASAVVFSGWHRLSYITTGGRFHSVELDRHIRLLHRAVGNAVVDDKYLVFG 180
LEPYW+RHAAASAVVFSGWHRLSYITT G SVELDR IR LHRAVGNAVVDDKYLVFG
Sbjct: 121 LEPYWKRHAAASAVVFSGWHRLSYITTDGHLKSVELDRQIRRLHRAVGNAVVDDKYLVFG 180
Query: 181 AGSMQLINALVYALSPDGNADSPPASVVATVPYYPAYKSQTDMFDGREYRWDGTTATWSN 240
GS LINALVYALSP+GNA SPPASVVATVPY+ YKSQT MFDGREYRWDGTTA W+N
Sbjct: 181 TGSTHLINALVYALSPEGNAASPPASVVATVPYFAMYKSQTVMFDGREYRWDGTTAAWAN 240
Query: 241 NGS-RNSTKGFIEFVTSPNNPDTALRKPVLAGSSAIVDHAYYWPHLTHIPAPADEDVMLF 299
N S RN T+GFIEFVTSPNNPD+ L +P+LAGSSAIVDHAYYWPHLTHIPAPADEDVMLF
Sbjct: 241 NNSSRNPTRGFIEFVTSPNNPDSTLHEPILAGSSAIVDHAYYWPHLTHIPAPADEDVMLF 300
Query: 300 TASKLSGHAGSRFGWALIRDEKVAKRALSYVEQSIMGASRDTQLRMLKILKVILANLHGK 359
T SKLSGHAGSRFGWAL+RDEKVA RA+SY+E+S +G SR+TQLR+LKILKVILANLHGK
Sbjct: 301 TTSKLSGHAGSRFGWALVRDEKVASRAISYIEESTVGTSRETQLRVLKILKVILANLHGK 360
Query: 360 EDIFAFGYDVMRSRWRRLNAVVSRSTRISLQKIPPQYCTYFNRIKEPSPAYAWVKCEWEE 419
EDIFAFGYDVM SRWRRLNAVVSRSTRISLQK+PPQYCTYFNRIKEPSPAYAWVKCEW E
Sbjct: 361 EDIFAFGYDVMSSRWRRLNAVVSRSTRISLQKMPPQYCTYFNRIKEPSPAYAWVKCEWVE 420
Query: 420 DVDCYETLLAAGIISRSGTLSEAEARYTRMSLLKAQDDFDVLLERITEFVDAEEHGRAPG 479
D DCYETLLAAGI S +GT++EA RYTR+SL+K QDDFD+LLERITEFVDAE+HGRAP
Sbjct: 421 DDDCYETLLAAGINSLTGTVNEAGTRYTRLSLIKTQDDFDMLLERITEFVDAEKHGRAPA 480
Query: 480 GSSSM 484
SSSM
Sbjct: 481 ASSSM 485
>Os05g0169300 Allinase, C-terminal domain containing protein
Length = 441
Score = 238 bits (608), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 138/376 (36%), Positives = 195/376 (51%), Gaps = 25/376 (6%)
Query: 106 TPNCTADADSGNPLFLEPYWRRHAAASA-VVFSGWHRLSYITTGGR---FHSVELDRHIR 161
T + + D G+P E +WR A A +V GW +SY + G F L+R +R
Sbjct: 71 TKDSIINLDHGDPTMYEAFWRGGAGERATIVIPGWQTMSYFSDVGSLCWFLEPGLEREVR 130
Query: 162 LLHRAVGNAVVDDKYLVFGAGSMQLINALVYALSPDGNADSPPASVVATVPYYPAYKSQT 221
LHR VGNAV D +++ G GS QL A +YALSP G S P +VV+ PYY +Y + T
Sbjct: 131 RLHRLVGNAVADGYHVLVGTGSTQLFQAALYALSPPG--PSAPMNVVSPAPYYSSYPAVT 188
Query: 222 DMFDGREYRWDGTTATWSNNGSRNSTKGFIEFVTSPNNPDTALRKPVLAGSSAIVDH--A 279
D YRW G + + ++E V SP+NPD +R+ VL + H A
Sbjct: 189 DFLKSGLYRWAGDAKMFDGDT-------YVELVCSPSNPDGGIREAVLKSGDGVAVHDLA 241
Query: 280 YYWPHLTHIPAPADEDVMLFTASKLSGHAGSRFGWALIRDEKVAKRALSYVEQSIMGASR 339
YYWP T I + A D+MLFT SK +GHAG+R GWAL++D VA++ ++E + +G S+
Sbjct: 242 YYWPQYTPITSAAAHDIMLFTVSKCTGHAGTRLGWALVKDRAVAQKMSKFIELNTIGVSK 301
Query: 340 DTQLRMLKILKVIL----------ANLHGKEDIFAFGYDVMRSRWRRLNAVVSRSTRISL 389
D+QLR KILK I + +F F M SRW +L A V+ S +L
Sbjct: 302 DSQLRAAKILKAITDGYDRAPAAGDDDDDSSRLFHFARRKMVSRWAKLRAAVAASGIFTL 361
Query: 390 QKIPPQYCTYFNRIKEPSPAYAWVKCEWEEDVDCYETLLAAGIISRSGTLSEAEARYTRM 449
P +CT+ N P +AW++C E D L IISR G A+ R R+
Sbjct: 362 PDELPGHCTFANETVSAYPPFAWLRCGKEGVDDLEGYLRERKIISRGGGKFGADGRVVRI 421
Query: 450 SLLKAQDDFDVLLERI 465
S+L + F + ++R+
Sbjct: 422 SMLDTDEAFAIFVDRL 437
>Os01g0169800 Allinase, C-terminal domain containing protein
Length = 214
Score = 145 bits (365), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 73/213 (34%), Positives = 112/213 (52%), Gaps = 11/213 (5%)
Query: 267 PVLAGSSAIVDHAYYWPHLTHIPAPADEDVMLFTASKLSGHAGSRFGWALIRDEKVAKRA 326
P + D AYYWP T I A D+MLFT SK +GHAG+R GWAL++D +A++
Sbjct: 1 PKTGNGRTVHDLAYYWPQYTPITKRASHDIMLFTVSKSTGHAGTRIGWALVKDRAIARKM 60
Query: 327 LSYVEQSIMGASRDTQLRMLKILKVILANLHGKED-----------IFAFGYDVMRSRWR 375
+VE + +G S+D+Q+R K+L + + + +F FG M RW
Sbjct: 61 TKFVELNTIGVSKDSQMRAAKVLAAVSDGYERRPEQTKETMTTPLRLFDFGRRKMVERWS 120
Query: 376 RLNAVVSRSTRISLQKIPPQYCTYFNRIKEPSPAYAWVKCEWEEDVDCYETLLAAGIISR 435
L A + S SL + +C + +PA+AW++C+ E+ DC L I++R
Sbjct: 121 MLRAAAAASGIFSLPEETSGFCNFTKETAATNPAFAWLRCDREDVEDCAGFLRGHKILTR 180
Query: 436 SGTLSEAEARYTRMSLLKAQDDFDVLLERITEF 468
SG A+ARY R+S+L D FD+ + R++
Sbjct: 181 SGAQFGADARYVRVSMLDRDDAFDIFINRLSSL 213
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.320 0.134 0.419
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 17,826,079
Number of extensions: 774702
Number of successful extensions: 1649
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 1642
Number of HSP's successfully gapped: 4
Length of query: 484
Length of database: 17,035,801
Length adjustment: 105
Effective length of query: 379
Effective length of database: 11,553,331
Effective search space: 4378712449
Effective search space used: 4378712449
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 158 (65.5 bits)