Os01g0169800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Allinase, C-terminal domain containing protein.
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Os01g0169800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Allinase, C-terminal domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 157.91 | 0.59 | 11.2 | 1.5 | 0.609 | -2.59 | 0.648 | 4.75 | -0.446 | 0.146 | 21.99 | 1008 | -- | -- |
| 171.92 | 0.611 | 11.3 | 0.397 | 0.345 | -2.24 | 1.23 | -- | -0.694 | 23.6 | 20.61 | 2132 | -- | -- |
| 159.44 | 0.588 | 11.1 | 1.57 | 0.626 | -2.62 | -- | 5.27 | -0.426 | 0.36 | 22.19 | 1008 | -- | -- |
| 176.45 | 0.619 | 11.3 | 0.344 | 0.237 | -2.18 | -- | -- | -0.737 | 0.0671 | 20.6 | 1995 | -- | -- |
| 168.31 | 0.604 | 11.1 | 1.55 | -- | -2.36 | -- | 4.36 | -0.396 | -- | 21.4 | 1918 | -- | -- |
| 303.03 | 0.816 | 11.4 | -0.381 | 0.131 | -- | -1.35 | -- | -1.22 | 8.12 | -- | -- | -- | -- |
| 307.11 | 0.821 | 11.4 | -0.426 | 0.214 | -- | -- | -- | -1.23 | 5.01 | -- | -- | -- | -- |
| 174.52 | 0.615 | 11.2 | 1 | -- | -2.67 | -- | -- | -0.434 | -- | 15.26 | 7798 | -- | -- |
| 179.21 | 0.623 | 11.3 | -- | 0.228 | -2.05 | -- | -- | -0.804 | 0.201 | 20.9 | 1985 | -- | -- |
| 309.52 | 0.822 | 11.4 | -0.419 | -- | -- | -- | -- | -1.22 | -- | -- | -- | -- | -- |
| 311.9 | 0.826 | 11.4 | -- | 0.206 | -- | -- | -- | -1.18 | 5.07 | -- | -- | -- | -- |
| 181.29 | 0.627 | 11.3 | -- | -- | -2.02 | -- | -- | -0.799 | -- | 20.7 | 1840 | -- | -- |
| 314.14 | 0.827 | 11.4 | -- | -- | -- | -- | -- | -1.17 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 159.78 | temperature | 20 | 720 | > th | dose dependent | rect. | 13 | 23 |
| 3 | 159.81 | temperature | 20 | 720 | > th | dose dependent | rect. | 7 | 21 |
| 33 | 162.56 | temperature | 20 | 720 | > th | dose dependent | rect. | 2 | 23 |
| 38 | 162.69 | temperature | 20 | 720 | > th | dose dependent | no | NA | NA |
| 47 | 163.70 | temperature | 20 | 720 | > th | dose dependent | rect. | 22 | 23 |
| 64 | 165.20 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 103 | 166.50 | temperature | 10 | 720 | > th | dose dependent | rect. | 22 | 23 |
| 136 | 167.67 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 9 |
| 137 | 167.69 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 7 |
| 146 | 167.82 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 215 | 169.40 | humidity | 90 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 225 | 169.47 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 9 |
| 255 | 169.67 | temperature | 10 | 720 | > th | dose dependent | rect. | 15 | 20 |
| 268 | 169.77 | radiation | 1 | 43200 | < th | dose dependent | rect. | 18 | 1 |
| 276 | 169.81 | radiation | 1 | 43200 | < th | dose dependent | rect. | 18 | 5 |
| 277 | 169.81 | radiation | 1 | 43200 | < th | dose dependent | rect. | 18 | 11 |
| 294 | 169.91 | radiation | 1 | 43200 | < th | dose dependent | rect. | 18 | 9 |
| 303 | 169.95 | temperature | 20 | 1440 | > th | dose dependent | sin | 15 | NA |
| 429 | 171.02 | temperature | 25 | 4320 | > th | dose independent | rect. | 17 | 1 |
| 466 | 171.25 | temperature | 20 | 1440 | > th | dose dependent | sin | 4 | NA |
| 534 | 171.66 | temperature | 25 | 4320 | < th | dose independent | rect. | 17 | 1 |
| 551 | 171.81 | humidity | 90 | 43200 | > th | dose dependent | rect. | 22 | 1 |
| 573 | 172.00 | radiation | 1 | 43200 | < th | dose dependent | sin | 16 | NA |
| 583 | 172.06 | radiation | 1 | 43200 | < th | dose dependent | rect. | 9 | 20 |
| 600 | 172.15 | humidity | 90 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 653 | 172.51 | temperature | 30 | 720 | < th | dose dependent | rect. | 5 | 21 |
| 694 | 172.77 | radiation | 1 | 43200 | < th | dose dependent | rect. | 9 | 10 |
| 701 | 172.79 | radiation | 1 | 43200 | < th | dose dependent | rect. | 9 | 14 |
| 761 | 173.00 | radiation | 1 | 43200 | < th | dose dependent | rect. | 2 | 3 |
| 765 | 173.01 | temperature | 25 | 1440 | > th | dose dependent | rect. | 7 | 10 |
| 775 | 173.05 | temperature | 30 | 720 | < th | dose dependent | rect. | 10 | 22 |
| 787 | 173.10 | radiation | 1 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 825 | 173.24 | radiation | 1 | 14400 | < th | dose dependent | rect. | 6 | 13 |
| 848 | 173.30 | radiation | 1 | 14400 | < th | dose dependent | rect. | 6 | 17 |
| 922 | 173.51 | radiation | 1 | 43200 | < th | dose dependent | rect. | 22 | 7 |
| 964 | 173.61 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 23 |