BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0717400 Os01g0717400|AK072165
(485 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0717400 EGF-like, alliinase domain containing protein 927 0.0
Os01g0717700 EGF-like, alliinase domain containing protein 780 0.0
Os05g0169300 Allinase, C-terminal domain containing protein 222 5e-58
Os01g0169800 Allinase, C-terminal domain containing protein 134 1e-31
>Os01g0717400 EGF-like, alliinase domain containing protein
Length = 485
Score = 927 bits (2395), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/485 (92%), Positives = 449/485 (92%)
Query: 1 MAIGWHRSQSLASAXXXXXXXXXXXXXXNAVFIAHQFLGASPPATPERLGDGLSWALQXX 60
MAIGWHRSQSLASA NAVFIAHQFLGASPPATPERLGDGLSWALQ
Sbjct: 1 MAIGWHRSQSLASAGLGLHVLLCSSLLLNAVFIAHQFLGASPPATPERLGDGLSWALQAA 60
Query: 61 XXXXXXXXXXCSGHGSVFLDGVTGEDGRPGCECNSCFSGPDCSVRIPNCAADGQGGDPLF 120
CSGHGSVFLDGVTGEDGRPGCECNSCFSGPDCSVRIPNCAADGQGGDPLF
Sbjct: 61 KEAEDVAAVDCSGHGSVFLDGVTGEDGRPGCECNSCFSGPDCSVRIPNCAADGQGGDPLF 120
Query: 121 LEPYWKRHAAASAVVFSGWHRLSYITTDGHLKSVELDRQIRRLHRAVGNAVVDDKYLVFG 180
LEPYWKRHAAASAVVFSGWHRLSYITTDGHLKSVELDRQIRRLHRAVGNAVVDDKYLVFG
Sbjct: 121 LEPYWKRHAAASAVVFSGWHRLSYITTDGHLKSVELDRQIRRLHRAVGNAVVDDKYLVFG 180
Query: 181 TGSTHLINALVYALSPEGNXXXXXXXXXXTVPYFAMYKSQTVMFDGREYRWDGTTAAWAN 240
TGSTHLINALVYALSPEGN TVPYFAMYKSQTVMFDGREYRWDGTTAAWAN
Sbjct: 181 TGSTHLINALVYALSPEGNAASPPASVVATVPYFAMYKSQTVMFDGREYRWDGTTAAWAN 240
Query: 241 NNSSRNPTRGFIEFVTSPNNPDSTLHEPILAGSSAIVDHAYYWPHLTHIPAPADEDVMLF 300
NNSSRNPTRGFIEFVTSPNNPDSTLHEPILAGSSAIVDHAYYWPHLTHIPAPADEDVMLF
Sbjct: 241 NNSSRNPTRGFIEFVTSPNNPDSTLHEPILAGSSAIVDHAYYWPHLTHIPAPADEDVMLF 300
Query: 301 TTSKLSGHAGSRFGWALVRDEKVASRAISYIEESTVGTSRETQLRVLKILKVILANLHGK 360
TTSKLSGHAGSRFGWALVRDEKVASRAISYIEESTVGTSRETQLRVLKILKVILANLHGK
Sbjct: 301 TTSKLSGHAGSRFGWALVRDEKVASRAISYIEESTVGTSRETQLRVLKILKVILANLHGK 360
Query: 361 EDIFAFGYDVMSSRWRRLNAVVSRSTRISLQKMPPQYCTYFNRIKEPSPAYAWVKCEWVE 420
EDIFAFGYDVMSSRWRRLNAVVSRSTRISLQKMPPQYCTYFNRIKEPSPAYAWVKCEWVE
Sbjct: 361 EDIFAFGYDVMSSRWRRLNAVVSRSTRISLQKMPPQYCTYFNRIKEPSPAYAWVKCEWVE 420
Query: 421 DDDCYETLLAAGINSLTGTVNEAGTRYTRLSLIKTQDDFDMLLERITEFVDAEKHGRAPA 480
DDDCYETLLAAGINSLTGTVNEAGTRYTRLSLIKTQDDFDMLLERITEFVDAEKHGRAPA
Sbjct: 421 DDDCYETLLAAGINSLTGTVNEAGTRYTRLSLIKTQDDFDMLLERITEFVDAEKHGRAPA 480
Query: 481 ASSSM 485
ASSSM
Sbjct: 481 ASSSM 485
>Os01g0717700 EGF-like, alliinase domain containing protein
Length = 484
Score = 780 bits (2013), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/485 (77%), Positives = 402/485 (82%), Gaps = 1/485 (0%)
Query: 1 MAIGWHRSQSLASAXXXXXXXXXXXXXXNAVFIAHQFLGASPPATPERLGDGLSWALQXX 60
M G HRSQSL SA NAVF AH L +SP ATPERLGDGLSWALQ
Sbjct: 1 METGRHRSQSLGSAGLAFHALLCSSLLLNAVFFAHHLLRSSPTATPERLGDGLSWALQAA 60
Query: 61 XXXXXXXXXXCSGHGSVFLDGVTGEDGRPGCECNSCFSGPDCSVRIPNCAADGQGGDPLF 120
CSGHG+VFLDGVTGEDGRPGCECN CFSGPDCSVR PNC AD G+PLF
Sbjct: 61 REAEAVAAADCSGHGNVFLDGVTGEDGRPGCECNRCFSGPDCSVRTPNCTADADSGNPLF 120
Query: 121 LEPYWKRHAAASAVVFSGWHRLSYITTDGHLKSVELDRQIRRLHRAVGNAVVDDKYLVFG 180
LEPYW+RHAAASAVVFSGWHRLSYITT G SVELDR IR LHRAVGNAVVDDKYLVFG
Sbjct: 121 LEPYWRRHAAASAVVFSGWHRLSYITTGGRFHSVELDRHIRLLHRAVGNAVVDDKYLVFG 180
Query: 181 TGSTHLINALVYALSPEGNXXXXXXXXXXTVPYFAMYKSQTVMFDGREYRWDGTTAAWAN 240
GS LINALVYALSP+GN TVPY+ YKSQT MFDGREYRWDGTTA W+N
Sbjct: 181 AGSMQLINALVYALSPDGNADSPPASVVATVPYYPAYKSQTDMFDGREYRWDGTTATWSN 240
Query: 241 NNSSRNPTRGFIEFVTSPNNPDSTLHEPILAGSSAIVDHAYYWPHLTHIPAPADEDVMLF 300
N S RN T+GFIEFVTSPNNPD+ L +P+LAGSSAIVDHAYYWPHLTHIPAPADEDVMLF
Sbjct: 241 NGS-RNSTKGFIEFVTSPNNPDTALRKPVLAGSSAIVDHAYYWPHLTHIPAPADEDVMLF 299
Query: 301 TTSKLSGHAGSRFGWALVRDEKVASRAISYIEESTVGTSRETQLRVLKILKVILANLHGK 360
T SKLSGHAGSRFGWAL+RDEKVA RA+SY+E+S +G SR+TQLR+LKILKVILANLHGK
Sbjct: 300 TASKLSGHAGSRFGWALIRDEKVAKRALSYVEQSIMGASRDTQLRMLKILKVILANLHGK 359
Query: 361 EDIFAFGYDVMSSRWRRLNAVVSRSTRISLQKMPPQYCTYFNRIKEPSPAYAWVKCEWVE 420
EDIFAFGYDVM SRWRRLNAVVSRSTRISLQK+PPQYCTYFNRIKEPSPAYAWVKCEW E
Sbjct: 360 EDIFAFGYDVMRSRWRRLNAVVSRSTRISLQKIPPQYCTYFNRIKEPSPAYAWVKCEWEE 419
Query: 421 DDDCYETLLAAGINSLTGTVNEAGTRYTRLSLIKTQDDFDMLLERITEFVDAEKHGRAPA 480
D DCYETLLAAGI S +GT++EA RYTR+SL+K QDDFD+LLERITEFVDAE+HGRAP
Sbjct: 420 DVDCYETLLAAGIISRSGTLSEAEARYTRMSLLKAQDDFDVLLERITEFVDAEEHGRAPG 479
Query: 481 ASSSM 485
SSSM
Sbjct: 480 GSSSM 484
>Os05g0169300 Allinase, C-terminal domain containing protein
Length = 441
Score = 222 bits (565), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 131/367 (35%), Positives = 184/367 (50%), Gaps = 26/367 (7%)
Query: 116 GDPLFLEPYWKRHAAASA-VVFSGWHRLSYITTDGHL---KSVELDRQIRRLHRAVGNAV 171
GDP E +W+ A A +V GW +SY + G L L+R++RRLHR VGNAV
Sbjct: 81 GDPTMYEAFWRGGAGERATIVIPGWQTMSYFSDVGSLCWFLEPGLEREVRRLHRLVGNAV 140
Query: 172 VDDKYLVFGTGSTHLINALVYALSPEGNXXXXXXXXXXTVPYFAMYKSQTVMFDGREYRW 231
D +++ GTGST L A +YALSP G PY++ Y + T YRW
Sbjct: 141 ADGYHVLVGTGSTQLFQAALYALSPPG--PSAPMNVVSPAPYYSSYPAVTDFLKSGLYRW 198
Query: 232 DGTTAAWANNNSSRNPTRGFIEFVTSPNNPDSTLHEPILAGSSAIVDH--AYYWPHLTHI 289
G + + ++E V SP+NPD + E +L + H AYYWP T I
Sbjct: 199 AGDAKMFDGDT--------YVELVCSPSNPDGGIREAVLKSGDGVAVHDLAYYWPQYTPI 250
Query: 290 PAPADEDVMLFTTSKLSGHAGSRFGWALVRDEKVASRAISYIEESTVGTSRETQLRVLKI 349
+ A D+MLFT SK +GHAG+R GWALV+D VA + +IE +T+G S+++QLR KI
Sbjct: 251 TSAAAHDIMLFTVSKCTGHAGTRLGWALVKDRAVAQKMSKFIELNTIGVSKDSQLRAAKI 310
Query: 350 LKVIL----------ANLHGKEDIFAFGYDVMSSRWRRLNAVVSRSTRISLQKMPPQYCT 399
LK I + +F F M SRW +L A V+ S +L P +CT
Sbjct: 311 LKAITDGYDRAPAAGDDDDDSSRLFHFARRKMVSRWAKLRAAVAASGIFTLPDELPGHCT 370
Query: 400 YFNRIKEPSPAYAWVKCEWVEDDDCYETLLAAGINSLTGTVNEAGTRYTRLSLIKTQDDF 459
+ N P +AW++C DD L I S G A R R+S++ T + F
Sbjct: 371 FANETVSAYPPFAWLRCGKEGVDDLEGYLRERKIISRGGGKFGADGRVVRISMLDTDEAF 430
Query: 460 DMLLERI 466
+ ++R+
Sbjct: 431 AIFVDRL 437
>Os01g0169800 Allinase, C-terminal domain containing protein
Length = 214
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 108/213 (50%), Gaps = 11/213 (5%)
Query: 268 PILAGSSAIVDHAYYWPHLTHIPAPADEDVMLFTTSKLSGHAGSRFGWALVRDEKVASRA 327
P + D AYYWP T I A D+MLFT SK +GHAG+R GWALV+D +A +
Sbjct: 1 PKTGNGRTVHDLAYYWPQYTPITKRASHDIMLFTVSKSTGHAGTRIGWALVKDRAIARKM 60
Query: 328 ISYIEESTVGTSRETQLRVLKILKVILANLHGKED-----------IFAFGYDVMSSRWR 376
++E +T+G S+++Q+R K+L + + + +F FG M RW
Sbjct: 61 TKFVELNTIGVSKDSQMRAAKVLAAVSDGYERRPEQTKETMTTPLRLFDFGRRKMVERWS 120
Query: 377 RLNAVVSRSTRISLQKMPPQYCTYFNRIKEPSPAYAWVKCEWVEDDDCYETLLAAGINSL 436
L A + S SL + +C + +PA+AW++C+ + +DC L I +
Sbjct: 121 MLRAAAAASGIFSLPEETSGFCNFTKETAATNPAFAWLRCDREDVEDCAGFLRGHKILTR 180
Query: 437 TGTVNEAGTRYTRLSLIKTQDDFDMLLERITEF 469
+G A RY R+S++ D FD+ + R++
Sbjct: 181 SGAQFGADARYVRVSMLDRDDAFDIFINRLSSL 213
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.319 0.133 0.418
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 16,915,334
Number of extensions: 712287
Number of successful extensions: 1400
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 1392
Number of HSP's successfully gapped: 4
Length of query: 485
Length of database: 17,035,801
Length adjustment: 105
Effective length of query: 380
Effective length of database: 11,553,331
Effective search space: 4390265780
Effective search space used: 4390265780
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 158 (65.5 bits)