BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os01g0650700 Os01g0650700|AK099838
         (259 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os01g0650700  Conserved hypothetical protein                      546   e-156
Os12g0231700                                                      528   e-150
Os03g0380600  Conserved hypothetical protein                      283   9e-77
Os12g0278401                                                      159   2e-39

>Os01g0650700 Conserved hypothetical protein
          Length = 259

 Score =  546 bits (1408), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 259/259 (100%), Positives = 259/259 (100%)

Query: 1   ISVERRPIGENHELLSREIGIVTRYHAPIKRIGWNNFSEADKEPLYELLKMKFNLDLSEP 60
           ISVERRPIGENHELLSREIGIVTRYHAPIKRIGWNNFSEADKEPLYELLKMKFNLDLSEP
Sbjct: 1   ISVERRPIGENHELLSREIGIVTRYHAPIKRIGWNNFSEADKEPLYELLKMKFNLDLSEP 60

Query: 61  HVKGCLELLFSSSYKTFHHRCYTHYLKSGGGDSARNSPYEPLRDRPGYWTWLCDHFETEE 120
           HVKGCLELLFSSSYKTFHHRCYTHYLKSGGGDSARNSPYEPLRDRPGYWTWLCDHFETEE
Sbjct: 61  HVKGCLELLFSSSYKTFHHRCYTHYLKSGGGDSARNSPYEPLRDRPGYWTWLCDHFETEE 120

Query: 121 FQKKSVIGKANRMKLAYVHKKGTKPFVALQHELSCDQISLYKECYCSDKGWASRDARQNY 180
           FQKKSVIGKANRMKLAYVHKKGTKPFVALQHELSCDQISLYKECYCSDKGWASRDARQNY
Sbjct: 121 FQKKSVIGKANRMKLAYVHKKGTKPFVALQHELSCDQISLYKECYCSDKGWASRDARQNY 180

Query: 181 ETMLQMQHENEQEGAIQLTEQQICEKVLGKAYGYIRGRGHGPKPNRRASSTSANTYQQME 240
           ETMLQMQHENEQEGAIQLTEQQICEKVLGKAYGYIRGRGHGPKPNRRASSTSANTYQQME
Sbjct: 181 ETMLQMQHENEQEGAIQLTEQQICEKVLGKAYGYIRGRGHGPKPNRRASSTSANTYQQME 240

Query: 241 EELASTEQTVAVQQNQLAV 259
           EELASTEQTVAVQQNQLAV
Sbjct: 241 EELASTEQTVAVQQNQLAV 259



>Os12g0231700 
          Length = 778

 Score =  528 bits (1361), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 250/257 (97%), Positives = 252/257 (98%)

Query: 3   VERRPIGENHELLSREIGIVTRYHAPIKRIGWNNFSEADKEPLYELLKMKFNLDLSEPHV 62
           +ERRPIGENHELLSREIGIVTRYHAPIKRIGWNNFSEADKEPLYELLKMKFNLDLSEPHV
Sbjct: 463 LERRPIGENHELLSREIGIVTRYHAPIKRIGWNNFSEADKEPLYELLKMKFNLDLSEPHV 522

Query: 63  KGCLELLFSSSYKTFHHRCYTHYLKSGGGDSARNSPYEPLRDRPGYWTWLCDHFETEEFQ 122
           KGCLELLFSSSYKTF HRCYTHYLKSGGGDSARNSPYEPLRDRPG WTWLCDHFETEEFQ
Sbjct: 523 KGCLELLFSSSYKTFRHRCYTHYLKSGGGDSARNSPYEPLRDRPGDWTWLCDHFETEEFQ 582

Query: 123 KKSVIGKANRMKLAYVHKKGTKPFVALQHELSCDQISLYKECYCSDKGWASRDARQNYET 182
           KKSVIGKANRMKLA VHKKGTKPFVALQHELSCDQISLYKECYCSDKGWASRDARQNYET
Sbjct: 583 KKSVIGKANRMKLANVHKKGTKPFVALQHELSCDQISLYKECYCSDKGWASRDARQNYET 642

Query: 183 MLQMQHENEQEGAIQLTEQQICEKVLGKAYGYIRGRGHGPKPNRRASSTSANTYQQMEEE 242
           MLQMQHENEQEGAIQLTEQQICEKVLGKAYGYIRGR HGPKPNRRASSTSANTYQQMEEE
Sbjct: 643 MLQMQHENEQEGAIQLTEQQICEKVLGKAYGYIRGRCHGPKPNRRASSTSANTYQQMEEE 702

Query: 243 LASTEQTVAVQQNQLAV 259
           LA T+QTVAVQQNQLAV
Sbjct: 703 LAYTKQTVAVQQNQLAV 719



>Os03g0380600 Conserved hypothetical protein
          Length = 1073

 Score =  283 bits (724), Expect = 9e-77,   Method: Compositional matrix adjust.
 Identities = 133/188 (70%), Positives = 154/188 (81%)

Query: 72  SSYKTFHHRCYTHYLKSGGGDSARNSPYEPLRDRPGYWTWLCDHFETEEFQKKSVIGKAN 131
           + YK+F HR Y HY+K GGG++AR +P++ L DR   W WLCDHFETEEFQK+S IGK N
Sbjct: 661 ADYKSFRHRFYEHYVKHGGGENARMNPHKALEDRLADWFWLCDHFETEEFQKRSTIGKDN 720

Query: 132 RMKLAYVHKKGTKPFVALQHELSCDQISLYKECYCSDKGWASRDARQNYETMLQMQHENE 191
           R  L Y+H KGTK FVALQHEL C  I+LYKECY +DKGWAS DAR+ ++ M++MQ E+ 
Sbjct: 721 RSNLPYMHWKGTKSFVALQHELGCGDITLYKECYSNDKGWASSDAREKHDQMVRMQEESM 780

Query: 192 QEGAIQLTEQQICEKVLGKAYGYIRGRGHGPKPNRRASSTSANTYQQMEEELASTEQTVA 251
           Q+  I LTE QICEKVLGKAYGYIRGRGHGPKPNRRA+STS  TYQQMEEELAST+QTVA
Sbjct: 781 QQDEIPLTEPQICEKVLGKAYGYIRGRGHGPKPNRRATSTSTRTYQQMEEELASTKQTVA 840

Query: 252 VQQNQLAV 259
           VQQNQLAV
Sbjct: 841 VQQNQLAV 848



>Os12g0278401 
          Length = 121

 Score =  159 bits (402), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 77/79 (97%), Positives = 78/79 (98%)

Query: 181 ETMLQMQHENEQEGAIQLTEQQICEKVLGKAYGYIRGRGHGPKPNRRASSTSANTYQQME 240
           ETMLQMQHENEQEGAIQLTEQQICEKVLGKAYGYIRGRGHGPKPNRRASSTSANTYQQME
Sbjct: 1   ETMLQMQHENEQEGAIQLTEQQICEKVLGKAYGYIRGRGHGPKPNRRASSTSANTYQQME 60

Query: 241 EELASTEQTVAVQQNQLAV 259
           EELAST+QT AVQQNQLAV
Sbjct: 61  EELASTKQTAAVQQNQLAV 79



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.316    0.132    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 8,998,714
Number of extensions: 369196
Number of successful extensions: 982
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 982
Number of HSP's successfully gapped: 4
Length of query: 259
Length of database: 17,035,801
Length adjustment: 99
Effective length of query: 160
Effective length of database: 11,866,615
Effective search space: 1898658400
Effective search space used: 1898658400
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 155 (64.3 bits)