Os01g0650700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0650700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 38.5 | 0.292 | 9.49 | -0.673 | 0.388 | -0.468 | -0.189 | -0.878 | 0.02 | 1.77 | 23.4 | 2276 | -- | -- |
| 39.47 | 0.293 | 9.52 | -0.987 | 0.409 | -0.465 | -0.108 | -- | -0.0419 | 1.77 | 22.5 | 2393 | -- | -- |
| 38.22 | 0.288 | 9.49 | -0.715 | 0.391 | -0.508 | -- | -0.761 | 0.0183 | 1.64 | 22.5 | 2372 | -- | -- |
| 39.27 | 0.292 | 9.52 | -0.989 | 0.391 | -0.509 | -- | -- | -0.0396 | 1.49 | 22.3 | 2459 | -- | -- |
| 47.34 | 0.32 | 9.49 | -0.76 | -- | -0.578 | -- | -0.739 | -0.00912 | -- | 22.51 | 2419 | -- | -- |
| 49.5 | 0.33 | 9.48 | -0.792 | 0.446 | -- | -0.0486 | -- | 0.143 | 1.47 | -- | -- | -- | -- |
| 49.51 | 0.329 | 9.48 | -0.791 | 0.446 | -- | -- | -- | 0.143 | 1.45 | -- | -- | -- | -- |
| 48.09 | 0.323 | 9.51 | -1.02 | -- | -0.612 | -- | -- | -0.0566 | -- | 24.13 | 2505 | -- | -- |
| 62.96 | 0.37 | 9.47 | -- | 0.408 | -0.266 | -- | -- | 0.145 | 1.49 | 22.58 | 2222 | -- | -- |
| 61.74 | 0.367 | 9.47 | -0.773 | -- | -- | -- | -- | 0.153 | -- | -- | -- | -- | -- |
| 65.98 | 0.38 | 9.46 | -- | 0.432 | -- | -- | -- | 0.231 | 1.39 | -- | -- | -- | -- |
| 72.67 | 0.397 | 9.48 | -- | -- | -0.325 | -- | -- | 0.112 | -- | 23.5 | 2474 | -- | -- |
| 77.49 | 0.411 | 9.45 | -- | -- | -- | -- | -- | 0.238 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 39.24 | temperature | 30 | 1440 | < th | dose dependent | rect. | 6 | 1 |
| 2 | 39.25 | temperature | 15 | 1440 | > th | dose dependent | rect. | 6 | 1 |
| 3 | 39.25 | temperature | 30 | 1440 | < th | dose dependent | rect. | 5 | 3 |
| 5 | 39.26 | temperature | 15 | 1440 | > th | dose dependent | rect. | 5 | 3 |
| 7 | 39.28 | temperature | 10 | 4320 | > th | dose dependent | rect. | 22 | 1 |
| 12 | 39.31 | temperature | 30 | 4320 | < th | dose dependent | rect. | 22 | 1 |
| 13 | 39.32 | temperature | 10 | 1440 | > th | dose dependent | rect. | 4 | 5 |
| 15 | 39.32 | temperature | 30 | 1440 | < th | dose dependent | rect. | 4 | 5 |
| 29 | 39.36 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 16 |
| 35 | 39.37 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 16 |
| 101 | 39.45 | temperature | 10 | 1440 | > th | dose dependent | rect. | 23 | 12 |
| 108 | 39.46 | temperature | 10 | 1440 | > th | dose dependent | sin | 9 | NA |
| 156 | 39.48 | temperature | 30 | 1440 | < th | dose dependent | rect. | 23 | 11 |
| 172 | 39.50 | temperature | 30 | 1440 | < th | dose dependent | sin | 9 | NA |
| 282 | 39.55 | temperature | 25 | 4320 | < th | dose dependent | rect. | 12 | 16 |
| 304 | 39.56 | temperature | 25 | 4320 | < th | dose dependent | rect. | 15 | 13 |
| 312 | 39.57 | temperature | 25 | 4320 | < th | dose dependent | sin | 15 | NA |
| 506 | 39.64 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 22 |
| 534 | 39.66 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 563 | 39.66 | temperature | 25 | 1440 | < th | dose dependent | rect. | 23 | 23 |
| 593 | 39.67 | temperature | 25 | 1440 | < th | dose dependent | rect. | 8 | 23 |
| 952 | 39.79 | temperature | 25 | 4320 | < th | dose dependent | rect. | 1 | 1 |