BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0585700 Os01g0585700|AK067338
(453 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0585700 SIT4 phosphatase-associated protein family pro... 801 0.0
Os05g0592500 SIT4 phosphatase-associated protein family pro... 496 e-140
Os04g0620400 SIT4 phosphatase-associated protein family pro... 350 1e-96
>Os01g0585700 SIT4 phosphatase-associated protein family protein
Length = 453
Score = 801 bits (2068), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/453 (88%), Positives = 401/453 (88%)
Query: 1 PTTYGCLRPPLGKHRLKIVEFISVLLTIGSETAEKELIRQSAIKRSVDLFFEYPYNNFLH 60
PTTYGCLRPPLGKHRLKIVEFISVLLTIGSETAEKELIRQSAIKRSVDLFFEYPYNNFLH
Sbjct: 1 PTTYGCLRPPLGKHRLKIVEFISVLLTIGSETAEKELIRQSAIKRSVDLFFEYPYNNFLH 60
Query: 61 HHVENIIVSCLEGKRTELVEHVLNDCDIVGKILAAEKLSSLSTESTGPTIPSDGKSIPKI 120
HHVENIIVSCLEGKRTELVEHVLNDCDIVGKILAAEKLSSLSTESTGPTIPSDGKSIPKI
Sbjct: 61 HHVENIIVSCLEGKRTELVEHVLNDCDIVGKILAAEKLSSLSTESTGPTIPSDGKSIPKI 120
Query: 121 GNIGHMTRITNKLIQLGSSNGTIQIHLQENSEWVDWQTDVLVKRNEVENVYHWACGRPTS 180
GNIGHMTRITNKLIQLGSSNGTIQIHLQENSEWVDWQTDVLVKRNEVENVYHWACGRPTS
Sbjct: 121 GNIGHMTRITNKLIQLGSSNGTIQIHLQENSEWVDWQTDVLVKRNEVENVYHWACGRPTS 180
Query: 181 LHXXXXXXXXXXXXXXXXXVAALANNLSQAFRYGIYSNDDMEENQGTLERDDEDVYFDDE 240
LH VAALANNLSQAFRYGIYSNDDMEENQGTLERDDEDVYFDDE
Sbjct: 181 LHDRGRDSDDDDFRDRDYDVAALANNLSQAFRYGIYSNDDMEENQGTLERDDEDVYFDDE 240
Query: 241 SAEVVISSLRLGDDQDGSLFTNSNWFTFDGERGITDRLAAVXXXXXXXXXXXXDTEETDD 300
SAEVVISSLRLGDDQDGSLFTNSNWFTFDGERGITDRLAAV DTEETDD
Sbjct: 241 SAEVVISSLRLGDDQDGSLFTNSNWFTFDGERGITDRLAAVPSSSPNSEEISPDTEETDD 300
Query: 301 GEVVIGTEDHMDTVNLGNGPIEEAEDAAEFTKHPATSTEDEQLQNAEGIERHLDVSNGXX 360
GEVVIGTEDHMDTVNLGNGPIEEAEDAAEFTKHPATSTEDEQLQNAEGIERHLDVSNG
Sbjct: 301 GEVVIGTEDHMDTVNLGNGPIEEAEDAAEFTKHPATSTEDEQLQNAEGIERHLDVSNGDA 360
Query: 361 XXXXXXXXXXXXXXXXXXXXXQTERTADEPTGSSDSGNSVSEVLPDPEDSSIDPANTAVS 420
QTERTADEPTGSSDSGNSVSEVLPDPEDSSIDPANTAVS
Sbjct: 361 EASTEAAEAAPVSSAPSSDEVQTERTADEPTGSSDSGNSVSEVLPDPEDSSIDPANTAVS 420
Query: 421 SEQTVDNEDVELPTKEVPSVDVETKTDEIKANE 453
SEQTVDNEDVELPTKEVPSVDVETKTDEIKANE
Sbjct: 421 SEQTVDNEDVELPTKEVPSVDVETKTDEIKANE 453
>Os05g0592500 SIT4 phosphatase-associated protein family protein
Length = 770
Score = 496 bits (1278), Expect = e-140, Method: Compositional matrix adjust.
Identities = 253/373 (67%), Positives = 291/373 (78%), Gaps = 18/373 (4%)
Query: 1 PTTYGCLRPPLGKHRLKIVEFISVLLTIGSETAEKELIRQSAIKRSVDLFFEYPYNNFLH 60
PTTYGCL+PPLGKHRLKIVEFISVLLTIGSETAE+ELI QSA+KRS+DLFF+YPYNNFLH
Sbjct: 320 PTTYGCLQPPLGKHRLKIVEFISVLLTIGSETAEQELINQSAVKRSIDLFFQYPYNNFLH 379
Query: 61 HHVENIIVSCLEGKRTELVEHVLNDCDIVGKILAAEKLSSLSTESTGPTIPSDGKSIPKI 120
HHVE+II+SCLE R++L++H LN+C++VGKILAAE+ SSLSTES PT+ S+GK PKI
Sbjct: 380 HHVESIIISCLEVNRSQLIDHALNECNLVGKILAAERSSSLSTESNTPTLLSEGKVPPKI 439
Query: 121 GNIGHMTRITNKLIQLGSSNGTIQIHLQENSEWVDWQTDVLVKRNEVENVYHWACGRPTS 180
GNIGH+TRI NKLIQLG+SN IQ HLQENSEWV+WQT LVKRNEVENVYHWACGRPTS
Sbjct: 440 GNIGHITRIANKLIQLGNSNSIIQSHLQENSEWVEWQTTALVKRNEVENVYHWACGRPTS 499
Query: 181 LHXXXXXXXXXXXXXXXXXVAALANNLSQAFRYGIYSNDDMEENQGTLERDDEDVYFDDE 240
LH VAALANNLSQAFRYG+YSNDD+EE Q +ERDDEDVYFDDE
Sbjct: 500 LHDRGRDSDDDDFRDRDYDVAALANNLSQAFRYGMYSNDDIEEAQ-VIERDDEDVYFDDE 558
Query: 241 SAEVVISSLRLGDDQD-GSLFTNSNWFTFDGERGITDRLAA-VXXXXXXXXXXXXDTEET 298
SAEVVISSLRLGDDQD SLFTNSNWFTFDG+RGI DRLAA V +TEET
Sbjct: 559 SAEVVISSLRLGDDQDSSSLFTNSNWFTFDGDRGINDRLAASVPSSSPNSEETSLNTEET 618
Query: 299 DDGEVVIG----TEDHMDTVNLGNGPIEEAEDAAEFTKHPATSTEDEQL---------QN 345
D EV IG E +++V+L NGP+EEA D A+ +K ++TEDE+L +
Sbjct: 619 D--EVQIGEDTSIEPQLESVSLENGPVEEAGDLADVSKQTDSNTEDEKLLCTEEEDLSKE 676
Query: 346 AEGIERHLDVSNG 358
AE ERH+DV +G
Sbjct: 677 AEESERHVDVRDG 689
>Os04g0620400 SIT4 phosphatase-associated protein family protein
Length = 661
Score = 350 bits (898), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 169/275 (61%), Positives = 205/275 (74%), Gaps = 1/275 (0%)
Query: 1 PTTYGCLRPPLGKHRLKIVEFISVLLTIGSETAEKELIRQSAIKRSVDLFFEYPYNNFLH 60
PTTYG L+PPLGK RLKIVEFISVLL+IGSE AE LI AIKR +DLFFEYP+NNFLH
Sbjct: 320 PTTYGVLQPPLGKQRLKIVEFISVLLSIGSEAAEIRLIHLGAIKRVIDLFFEYPFNNFLH 379
Query: 61 HHVENIIVSCLEGKRTELVEHVLNDCDIVGKILAAEKLSSLSTESTGPTIPSDGKSIPKI 120
HHVE+II SCL+ K+ +L+ HVL++C +V +IL AEK S+LS + T T+P +G+ P+I
Sbjct: 380 HHVESIISSCLDSKQDQLICHVLDECKLVTRILEAEKNSALSIDLTKHTVPLEGRFTPRI 439
Query: 121 GNIGHMTRITNKLIQLGSSNGTIQIHLQENSEWVDWQTDVLVKRNEVENVYHWACGRPTS 180
G +GHMTRI+NKLIQL +N IQ HLQ+NS W +W L + N VENVY WACGRPT+
Sbjct: 440 GLVGHMTRISNKLIQLAKTNSIIQSHLQQNSGWAEWHAGTLTRCNAVENVYQWACGRPTT 499
Query: 181 LHXXXXXXXXXXXXXXXXXVAALANNLSQAFRYGIYSNDDMEENQGTLERDDEDVYFDDE 240
L VAALA+NLSQA +YGIYS +D++E+Q ERDDEDVYFDDE
Sbjct: 500 LQDRGRDSDEEDFRDRDYDVAALASNLSQASKYGIYSYEDIDEDQVPHERDDEDVYFDDE 559
Query: 241 SAEVVISSLRLGDDQDG-SLFTNSNWFTFDGERGI 274
SAEVVISSLRLGD+ D SLFTNSNWF F ++ +
Sbjct: 560 SAEVVISSLRLGDEHDSNSLFTNSNWFAFGEDKAL 594
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.310 0.130 0.367
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 13,962,871
Number of extensions: 539526
Number of successful extensions: 1470
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 1462
Number of HSP's successfully gapped: 3
Length of query: 453
Length of database: 17,035,801
Length adjustment: 104
Effective length of query: 349
Effective length of database: 11,605,545
Effective search space: 4050335205
Effective search space used: 4050335205
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 158 (65.5 bits)