BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0514600 Os01g0514600|AK119316
(695 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0514600 Similar to Fimbrin 1 (AtFIM1) 1239 0.0
Os02g0719100 Similar to Fimbrin/plastin-like (Fragment) 789 0.0
Os02g0588300 Similar to Fimbrin 1 (AtFIM1) 729 0.0
>Os01g0514600 Similar to Fimbrin 1 (AtFIM1)
Length = 695
Score = 1239 bits (3206), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 614/669 (91%), Positives = 614/669 (91%)
Query: 1 MGLDGLVVVSDPYLQRRFSXXXXXXXXXXXXXXXXXXPSGRLRLRDLPAALSSAGVGAGK 60
MGLDGLVVVSDPYLQRRFS PSGRLRLRDLPAALSSAGVGAGK
Sbjct: 1 MGLDGLVVVSDPYLQRRFSQADLRALQAQYAALRDAAPSGRLRLRDLPAALSSAGVGAGK 60
Query: 61 GGDAEKENSAPAAAQLTEEEWASVLKAVARADERPHQGVGFELFLRVYAEMQLRLXXXXX 120
GGDAEKENSAPAAAQLTEEEWASVLKAVARADERPHQGVGFELFLRVYAEMQLRL
Sbjct: 61 GGDAEKENSAPAAAQLTEEEWASVLKAVARADERPHQGVGFELFLRVYAEMQLRLKGAAA 120
Query: 121 XXXXXXXXXXXXXXXXXXXXXFXXXXXXXXXXXISESEKASYVGHINAYLAEDPFLNTAL 180
F ISESEKASYVGHINAYLAEDPFLNTAL
Sbjct: 121 GKKAGGGGGGIARSSSSSAAAFLTAATTTLLHTISESEKASYVGHINAYLAEDPFLNTAL 180
Query: 181 PIDPATDHLFHLTKDGVLLCKLINLAVPGTIDERAINTKKLLNLWEKNENHTLCLNSAKA 240
PIDPATDHLFHLTKDGVLLCKLINLAVPGTIDERAINTKKLLNLWEKNENHTLCLNSAKA
Sbjct: 181 PIDPATDHLFHLTKDGVLLCKLINLAVPGTIDERAINTKKLLNLWEKNENHTLCLNSAKA 240
Query: 241 IGCTVVNIGTQDLAEGRPHLILGLISQIIKIQLLADVNLKSTPQLVELVEDSKEMEELMS 300
IGCTVVNIGTQDLAEGRPHLILGLISQIIKIQLLADVNLKSTPQLVELVEDSKEMEELMS
Sbjct: 241 IGCTVVNIGTQDLAEGRPHLILGLISQIIKIQLLADVNLKSTPQLVELVEDSKEMEELMS 300
Query: 301 LSPEKILLRWMNFQLKKGGFQRTVTNFSSDIKDSEAYACLLNVLAPECSAKPSPMSVKDL 360
LSPEKILLRWMNFQLKKGGFQRTVTNFSSDIKDSEAYACLLNVLAPECSAKPSPMSVKDL
Sbjct: 301 LSPEKILLRWMNFQLKKGGFQRTVTNFSSDIKDSEAYACLLNVLAPECSAKPSPMSVKDL 360
Query: 361 LHRARLVLEHADRMGCKRYLTPKDIVDGLPNLNLAFVAHIFQKRNGLSKQMKQVSFVDGL 420
LHRARLVLEHADRMGCKRYLTPKDIVDGLPNLNLAFVAHIFQKRNGLSKQMKQVSFVDGL
Sbjct: 361 LHRARLVLEHADRMGCKRYLTPKDIVDGLPNLNLAFVAHIFQKRNGLSKQMKQVSFVDGL 420
Query: 421 SDDAQVSREERSFRLWINSLGISTYINNVFEDLRNGWVLLEVIDKIAPGSVNWKMANRPP 480
SDDAQVSREERSFRLWINSLGISTYINNVFEDLRNGWVLLEVIDKIAPGSVNWKMANRPP
Sbjct: 421 SDDAQVSREERSFRLWINSLGISTYINNVFEDLRNGWVLLEVIDKIAPGSVNWKMANRPP 480
Query: 481 IKLPFRKVENCNQVLKIGKELKFSLVNIAGNDIVQGNKKLILAFLWQLMRYNILQLLKNL 540
IKLPFRKVENCNQVLKIGKELKFSLVNIAGNDIVQGNKKLILAFLWQLMRYNILQLLKNL
Sbjct: 481 IKLPFRKVENCNQVLKIGKELKFSLVNIAGNDIVQGNKKLILAFLWQLMRYNILQLLKNL 540
Query: 541 RFHSNGKEITDNDILIWANKKVKDSGKHSRMESFKDRSLSSGIFFLNLLGAVEPRVVNWS 600
RFHSNGKEITDNDILIWANKKVKDSGKHSRMESFKDRSLSSGIFFLNLLGAVEPRVVNWS
Sbjct: 541 RFHSNGKEITDNDILIWANKKVKDSGKHSRMESFKDRSLSSGIFFLNLLGAVEPRVVNWS 600
Query: 601 LVTKGEKDEEKQMNASYIISVARKLGCSIFLLPEDILEVNQKMMLTLTASIMYWHLKKPT 660
LVTKGEKDEEKQMNASYIISVARKLGCSIFLLPEDILEVNQKMMLTLTASIMYWHLKKPT
Sbjct: 601 LVTKGEKDEEKQMNASYIISVARKLGCSIFLLPEDILEVNQKMMLTLTASIMYWHLKKPT 660
Query: 661 SFSLDTENG 669
SFSLDTENG
Sbjct: 661 SFSLDTENG 669
>Os02g0719100 Similar to Fimbrin/plastin-like (Fragment)
Length = 706
Score = 789 bits (2037), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/674 (60%), Positives = 493/674 (73%), Gaps = 49/674 (7%)
Query: 7 VVVSDPYLQRRFSXXXXXXXXXXXXXXXXXXPSGRLRLRDLPAALSSAGVGAGKGGDAEK 66
VVVSDP LQ +F+ ++ LR L A S + GG A
Sbjct: 7 VVVSDPSLQGQFT---------------------QVELRSLKAKFLS--LKRDSGGHATT 43
Query: 67 ENSAPAAAQL-------TEEEWASVL-KAVARADERPHQGVGFELFLRVYAEMQLRLXXX 118
+N +L +EEE A+ L ++ AD Q + FE FLR Y +Q R+
Sbjct: 44 KNLPGLMKKLRGLNEVISEEEIAAHLSQSYPDAD----QEIEFESFLREYLNLQSRVSAK 99
Query: 119 XXXXXXXXXXXXXXXXXXXXXXXFXXXXXXXXXXXISESEKASYVGHINAYLAEDPFLNT 178
F ++++EK+SYV HIN YL EDPFL
Sbjct: 100 EGGGGGGGGGKTASS--------FLKSSTTTLLHNLNQAEKSSYVAHINTYLREDPFLKK 151
Query: 179 ALPIDPATDHLFHLTKDGVLLCKLINLAVPGTIDERAINTKKLLNLWEKNENHTLCLNSA 238
LPI+P + LF L +DGVLLCKLINLAVPGTIDERAIN K++LN WE+NENHTLCLNSA
Sbjct: 152 YLPIEPTDNQLFDLVRDGVLLCKLINLAVPGTIDERAINKKRVLNPWERNENHTLCLNSA 211
Query: 239 KAIGCTVVNIGTQDLAEGRPHLILGLISQIIKIQLLADVNLKSTPQLVELVEDSKEMEEL 298
KAIGCTVVNIGTQDL EGRPHLILGLISQIIKIQLLAD+NLK TPQLVEL +DSK+++E+
Sbjct: 212 KAIGCTVVNIGTQDLVEGRPHLILGLISQIIKIQLLADLNLKKTPQLVELFDDSKDIDEV 271
Query: 299 MSLSPEKILLRWMNFQLKKGGFQRTVTNFSSDIKDSEAYACLLNVLAPECSAKPSPMSVK 358
+SLSPEK+LLRWMN LKK G+++TV+NFS+D+KD EAYA LL LAPE S + + + K
Sbjct: 272 LSLSPEKMLLRWMNHHLKKAGYKKTVSNFSTDVKDGEAYAYLLKALAPEHSPE-TTLETK 330
Query: 359 DLLHRARLVLEHADRMGCKRYLTPKDIVDGLPNLNLAFVAHIFQKRNGLSKQMKQVSFVD 418
D RA+LVLE A+++ CKRYLTPKDI +G NLNLAFVA IFQ RNGL+ +QV+
Sbjct: 331 DPSERAKLVLEQAEKLDCKRYLTPKDITEGSANLNLAFVAQIFQHRNGLTSDTRQVTLNQ 390
Query: 419 GLS-DDAQVSREERSFRLWINSLGISTYINNVFEDLRNGWVLLEVIDKIAPGSVNWKMAN 477
S DD +SREERSFR+WINSLG+ +Y+NNVFED+R+GWVLLEV+DK++PGSVNWK+A+
Sbjct: 391 TASRDDVLLSREERSFRMWINSLGVDSYVNNVFEDVRHGWVLLEVLDKVSPGSVNWKLAS 450
Query: 478 RPPIKLPFRKVENCNQVLKIGKELKFSLVNIAGNDIVQGNKKLILAFLWQLMRYNILQLL 537
+PPIKLPFRK+ENCNQV+KIGKELKFSLVN+AGNDIVQGNKKLI+A LWQLMR+N+LQLL
Sbjct: 451 KPPIKLPFRKLENCNQVVKIGKELKFSLVNLAGNDIVQGNKKLIVALLWQLMRFNMLQLL 510
Query: 538 KNLRFH---SNGKEITDNDILIWANKKVKDSGKHSRMESFKDRSLSSGIFFLNLLGAVEP 594
LR H S GKEITD DIL WAN KVK SG+ S+MESFKD+SLS+G FFL LL AV+P
Sbjct: 511 NRLRSHSQGSQGKEITDADILKWANSKVKASGRTSQMESFKDKSLSNGRFFLELLSAVQP 570
Query: 595 RVVNWSLVTKGEKDEEKQMNASYIISVARKLGCSIFLLPEDILEVNQKMMLTLTASIMYW 654
RVVNW +VTKGE DEEK++NA+Y ISVARK+GCS+FLLPEDI+EVNQKM+LTLTASIMYW
Sbjct: 571 RVVNWKVVTKGEDDEEKKLNATYTISVARKIGCSVFLLPEDIIEVNQKMILTLTASIMYW 630
Query: 655 HL-KKPTSFSLDTE 667
L K+P S S +E
Sbjct: 631 SLQKQPQSQSETSE 644
>Os02g0588300 Similar to Fimbrin 1 (AtFIM1)
Length = 673
Score = 729 bits (1881), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/656 (57%), Positives = 465/656 (70%), Gaps = 38/656 (5%)
Query: 7 VVVSDPYLQRRFSXXXXXXXXXXXXXXXXXXPSGRLRLRDLPAALSSAGVGAGKGGDAEK 66
V+VSDP+LQ +F+ + + ++DLP +
Sbjct: 7 VLVSDPWLQSQFTQVQLRTLKTKFVSVKKSD-ADHVAVKDLPPVM--------------- 50
Query: 67 ENSAPAAAQLTEEEWASVLKAVARADERP--HQGVGFELFLRVYAEMQLRLXXXXXXXXX 124
E L+EEE ++ L + P +Q + FE FLR Y +Q +
Sbjct: 51 EKLRGIHEVLSEEEISTFL-----GESYPDMNQTIEFESFLREYLNLQAK---------- 95
Query: 125 XXXXXXXXXXXXXXXXXFXXXXXXXXXXXISESEKASYVGHINAYLAEDPFLNTALPIDP 184
F I+ESEK SYV HIN +L ED FL LP+DP
Sbjct: 96 -GSSKTGGKKKLKGSVSFLKASTTTLLHVINESEKTSYVNHINNFLGEDSFLKNFLPLDP 154
Query: 185 ATDHLFHLTKDGVLLCKLINLAVPGTIDERAINTKKLLNLWEKNENHTLCLNSAKAIGCT 244
+T+ +F+L +DGVLLCKLIN+AVPGTIDERAINTKK N WE+NENHTLCLNSAKAIGCT
Sbjct: 155 STNDIFNLVRDGVLLCKLINVAVPGTIDERAINTKKDPNPWERNENHTLCLNSAKAIGCT 214
Query: 245 VVNIGTQDLAEGRPHLILGLISQIIKIQLLADVNLKSTPQLVELVED--SKEMEELMSLS 302
VVNIGTQDL E RPHL+LGL+SQIIKIQLLAD+NLK TPQL ELV D SKE EEL++L+
Sbjct: 215 VVNIGTQDLIEARPHLVLGLLSQIIKIQLLADLNLKKTPQLAELVADDNSKEAEELVTLA 274
Query: 303 PEKILLRWMNFQLKKGGFQRTVTNFSSDIKDSEAYACLLNVLAPECSAKPSPMSVKDLLH 362
P+K+LL+WMNF LKK G+++TVTNFS+D+KD EAYA LLN LAPE S+ + + D
Sbjct: 275 PDKMLLKWMNFHLKKAGYKKTVTNFSTDVKDGEAYAYLLNTLAPELSST-TMIETSDPNE 333
Query: 363 RARLVLEHADRMGCKRYLTPKDIVDGLPNLNLAFVAHIFQKRNGLSKQMKQVSFVDGLSD 422
RA+ VLE A+++ C RY+T KDIV+G NLNLAFVA IF RNGLS V D
Sbjct: 334 RAKKVLETAEKLECTRYVTSKDIVEGSANLNLAFVAQIFHHRNGLSDN-NVAPVVQDTPD 392
Query: 423 DAQVSREERSFRLWINSLGISTYINNVFEDLRNGWVLLEVIDKIAPGSVNWKMANRPPIK 482
D + +REER+FRLWINSLGI+TY+NN+FED+R GWVLLEV+DKI+PG VNWK A++PPI
Sbjct: 393 DVEATREERAFRLWINSLGIATYVNNLFEDVRTGWVLLEVLDKISPGIVNWKQASKPPII 452
Query: 483 LPFRKVENCNQVLKIGKELKFSLVNIAGNDIVQGNKKLILAFLWQLMRYNILQLLKNLRF 542
+PFRKVEN NQV++IGKELKFS+VNI+GNDIVQGNKKLILAFLWQLMR +ILQLLKNLR
Sbjct: 453 MPFRKVENGNQVIEIGKELKFSVVNISGNDIVQGNKKLILAFLWQLMRTSILQLLKNLRT 512
Query: 543 HSNGKEITDNDILIWANKKVKDSGKHSRMESFKDRSLSSGIFFLNLLGAVEPRVVNWSLV 602
HS KEITD DILIWAN KVK+SGK S +E+FKD+S+++G+FFL LL AV R V+ S+V
Sbjct: 513 HSKDKEITDADILIWANNKVKESGKTSCIENFKDKSIANGVFFLELLHAVNHRHVDLSMV 572
Query: 603 TKGEKDEEKQMNASYIISVARKLGCSIFLLPEDILEVNQKMMLTLTASIMYWHLKK 658
KGE DEEK+ NA+Y ISVARKLGC++F+LPEDI+EVN KM+L LTASIMYW L+K
Sbjct: 573 KKGEDDEEKKSNATYTISVARKLGCTLFMLPEDIMEVNPKMILVLTASIMYWSLQK 628
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.319 0.135 0.395
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 20,397,724
Number of extensions: 824377
Number of successful extensions: 2705
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 2680
Number of HSP's successfully gapped: 3
Length of query: 695
Length of database: 17,035,801
Length adjustment: 108
Effective length of query: 587
Effective length of database: 11,396,689
Effective search space: 6689856443
Effective search space used: 6689856443
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 160 (66.2 bits)