Os01g0514600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Fimbrin 1 (AtFIM1).
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Os01g0514600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Fimbrin 1 (AtFIM1).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 255.31 | 0.751 | 4.99 | -2.25 | 0.773 | 1.19 | 1.61 | 0.883 | 0.53 | 1.79 | 84.98 | 5923 | -- | -- |
| 256.83 | 0.746 | 5 | -2.12 | 0.77 | 1.18 | 1.65 | -- | 0.556 | 1.76 | 84.75 | 5933 | -- | -- |
| 264.95 | 0.758 | 5 | -2.29 | 0.778 | 1.18 | -- | 0.961 | 0.507 | 2.1 | 84 | 5931 | -- | -- |
| 266.8 | 0.761 | 5.01 | -2.17 | 0.82 | 1.19 | -- | -- | 0.549 | 2.39 | 84.23 | 5838 | -- | -- |
| 288.01 | 0.795 | 5.11 | -2.06 | -- | 0.508 | -- | 1.63 | 0.022 | -- | 84 | 5931 | -- | -- |
| 283.35 | 0.789 | 5.13 | -1.94 | 0.832 | -- | 1.65 | -- | -0.0254 | 1.89 | -- | -- | -- | -- |
| 293.29 | 0.802 | 5.14 | -1.99 | 0.847 | -- | -- | -- | -0.0364 | 2.36 | -- | -- | -- | -- |
| 301.46 | 0.809 | 4.99 | -2.13 | -- | 1.46 | -- | -- | 0.633 | -- | 83 | 6079 | -- | -- |
| 380.9 | 0.909 | 5 | -- | 0.788 | 1 | -- | -- | 0.572 | 2.19 | 83 | 18645 | -- | -- |
| 335.81 | 0.856 | 5.13 | -1.96 | -- | -- | -- | -- | -0.0157 | -- | -- | -- | -- | -- |
| 398.03 | 0.933 | 5.09 | -- | 0.809 | -- | -- | -- | 0.186 | 2.32 | -- | -- | -- | -- |
| 408.16 | 0.944 | 5.08 | -- | -- | 0.503 | -- | -- | 0.212 | -- | 83 | 18645 | -- | -- |
| 436.91 | 0.976 | 5.08 | -- | -- | -- | -- | -- | 0.202 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 256.33 | humidity | 90 | 4320 | > th | dose dependent | rect. | 5 | 9 |
| 8 | 257.66 | humidity | 90 | 720 | < th | dose independent | rect. | 24 | 9 |
| 10 | 257.68 | humidity | 90 | 4320 | > th | dose independent | rect. | 5 | 10 |
| 14 | 257.84 | humidity | 90 | 4320 | > th | dose dependent | sin | 2 | NA |
| 76 | 260.04 | humidity | 90 | 4320 | > th | dose dependent | rect. | 8 | 6 |
| 82 | 260.20 | humidity | 90 | 4320 | < th | dose independent | rect. | 6 | 8 |
| 87 | 260.27 | humidity | 90 | 4320 | > th | dose independent | sin | 2 | NA |
| 99 | 260.59 | humidity | 90 | 4320 | > th | dose independent | rect. | 8 | 6 |
| 110 | 260.82 | wind | 5 | 14400 | < th | dose independent | rect. | 10 | 7 |
| 119 | 260.91 | wind | 5 | 14400 | > th | dose independent | rect. | 10 | 7 |
| 129 | 260.99 | wind | 5 | 14400 | < th | dose independent | rect. | 11 | 4 |
| 147 | 261.12 | wind | 5 | 14400 | > th | dose independent | rect. | 11 | 4 |
| 155 | 261.19 | humidity | 90 | 720 | < th | dose independent | rect. | 24 | 17 |
| 183 | 261.34 | humidity | 90 | 4320 | > th | dose independent | rect. | 1 | 16 |
| 240 | 261.82 | humidity | 80 | 720 | > th | dose dependent | rect. | 24 | 15 |
| 246 | 261.86 | humidity | 90 | 4320 | < th | dose independent | rect. | 6 | 2 |
| 248 | 261.88 | humidity | 90 | 720 | > th | dose dependent | rect. | 1 | 4 |
| 250 | 261.89 | wind | 1 | 720 | > th | dose independent | rect. | 22 | 5 |
| 252 | 261.89 | wind | 3 | 14400 | > th | dose dependent | rect. | 11 | 4 |
| 266 | 261.96 | atmosphere | 1005 | 4320 | > th | dose independent | rect. | 24 | 1 |
| 271 | 261.98 | humidity | 90 | 4320 | < th | dose independent | sin | 3 | NA |
| 308 | 262.23 | humidity | 90 | 720 | > th | dose dependent | rect. | 1 | 11 |
| 364 | 262.57 | atmosphere | 1005 | 4320 | < th | dose independent | rect. | 24 | 1 |
| 411 | 262.83 | humidity | 90 | 720 | > th | dose independent | rect. | 24 | 15 |
| 446 | 263.00 | humidity | 90 | 4320 | < th | dose independent | rect. | 1 | 14 |
| 456 | 263.03 | humidity | 90 | 720 | > th | dose independent | rect. | 24 | 12 |
| 479 | 263.11 | humidity | 90 | 4320 | < th | dose independent | rect. | 23 | 16 |
| 500 | 263.21 | humidity | 90 | 4320 | < th | dose independent | rect. | 23 | 18 |
| 509 | 263.25 | humidity | 80 | 90 | > th | dose dependent | rect. | 3 | 22 |
| 518 | 263.30 | wind | 5 | 14400 | > th | dose independent | rect. | 24 | 17 |
| 524 | 263.32 | wind | 5 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 530 | 263.33 | humidity | 90 | 720 | < th | dose independent | sin | 4 | NA |
| 551 | 263.40 | humidity | 90 | 720 | < th | dose independent | rect. | 5 | 2 |
| 559 | 263.41 | wind | 5 | 14400 | < th | dose independent | rect. | 24 | 17 |
| 599 | 263.53 | humidity | 80 | 4320 | > th | dose dependent | rect. | 10 | 1 |
| 622 | 263.63 | humidity | 80 | 4320 | > th | dose independent | rect. | 11 | 1 |
| 630 | 263.66 | humidity | 80 | 4320 | < th | dose independent | rect. | 11 | 1 |
| 645 | 263.72 | humidity | 90 | 720 | < th | dose independent | rect. | 1 | 3 |
| 683 | 263.85 | humidity | 90 | 270 | < th | dose independent | rect. | 23 | 21 |
| 742 | 264.03 | humidity | 90 | 720 | < th | dose independent | sin | 7 | NA |
| 750 | 264.04 | wind | 9 | 90 | < th | dose dependent | rect. | 3 | 10 |
| 788 | 264.14 | humidity | 50 | 4320 | > th | dose dependent | rect. | 5 | 3 |
| 790 | 264.14 | temperature | 10 | 90 | > th | dose dependent | rect. | 9 | 18 |
| 791 | 264.15 | wind | 5 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 826 | 264.25 | wind | 3 | 14400 | < th | dose dependent | rect. | 23 | 1 |
| 890 | 264.43 | humidity | 70 | 4320 | > th | dose independent | rect. | 15 | 1 |
| 962 | 264.58 | humidity | 80 | 720 | > th | dose dependent | sin | 5 | NA |
| 969 | 264.59 | humidity | 90 | 1440 | > th | dose independent | rect. | 1 | 2 |
| 985 | 264.62 | humidity | 80 | 4320 | > th | dose dependent | rect. | 2 | 23 |
| 992 | 264.64 | humidity | 80 | 4320 | > th | dose dependent | no | NA | NA |