Os02g0719100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Fimbrin/plastin-like (Fragment).
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Os02g0719100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Fimbrin/plastin-like (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 44.41 | 0.313 | 11.2 | 0.515 | 0.956 | -0.428 | -0.0507 | 0.543 | 0.208 | 10.1 | 20.6 | 976 | -- | -- |
| 45.14 | 0.313 | 11.2 | 0.426 | 0.971 | -0.491 | -0.127 | -- | 0.171 | 10.1 | 20.57 | 1091 | -- | -- |
| 44.42 | 0.31 | 11.2 | 0.517 | 0.957 | -0.427 | -- | 0.562 | 0.208 | 10.1 | 20.59 | 978 | -- | -- |
| 45.22 | 0.313 | 11.2 | 0.421 | 0.965 | -0.504 | -- | -- | 0.189 | 10.1 | 20.58 | 1091 | -- | -- |
| 96.71 | 0.458 | 11.3 | 0.537 | -- | -0.613 | -- | 0.498 | 0.221 | -- | 20.7 | 804 | -- | -- |
| 51.58 | 0.337 | 11.3 | 0.226 | 1.01 | -- | -0.22 | -- | 0.0751 | 10.2 | -- | -- | -- | -- |
| 51.77 | 0.337 | 11.3 | 0.217 | 1.01 | -- | -- | -- | 0.0744 | 10.2 | -- | -- | -- | -- |
| 96.58 | 0.458 | 11.3 | 0.462 | -- | -0.727 | -- | -- | 0.238 | -- | 20.7 | 804 | -- | -- |
| 48.83 | 0.325 | 11.3 | -- | 0.963 | -0.355 | -- | -- | 0.112 | 10.2 | 20.56 | 608 | -- | -- |
| 113.85 | 0.499 | 11.3 | 0.202 | -- | -- | -- | -- | 0.0724 | -- | -- | -- | -- | -- |
| 53.01 | 0.341 | 11.3 | -- | 1.01 | -- | -- | -- | 0.0503 | 10.2 | -- | -- | -- | -- |
| 102.09 | 0.471 | 11.3 | -- | -- | -0.605 | -- | -- | 0.17 | -- | 20.7 | 797 | -- | -- |
| 114.93 | 0.5 | 11.3 | -- | -- | -- | -- | -- | 0.05 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 42.38 | temperature | 20.0 | 720 | > th | dose independent | rect. | 23 | 4 |
| 8 | 42.70 | temperature | 20.0 | 720 | > th | dose independent | sin | 11 | NA |
| 12 | 42.81 | temperature | 20.0 | 720 | > th | dose independent | rect. | 16 | 15 |
| 18 | 42.91 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 23 | 3 |
| 23 | 42.92 | temperature | 20.0 | 720 | > th | dose independent | rect. | 16 | 17 |
| 30 | 42.95 | temperature | 20.0 | 720 | > th | dose independent | rect. | 1 | 1 |
| 33 | 42.96 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 1 | 1 |
| 73 | 43.15 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 6 | 1 |
| 136 | 43.57 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 22 | 9 |
| 195 | 43.76 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 202 | 43.79 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 207 | 43.80 | temperature | 20.0 | 10 | > th | dose independent | rect. | 1 | 4 |
| 232 | 43.88 | temperature | 20.0 | 1440 | < th | dose independent | sin | 10 | NA |
| 253 | 43.95 | temperature | 20.0 | 90 | > th | dose independent | rect. | 1 | 4 |
| 257 | 43.96 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 13 | 1 |
| 261 | 43.96 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 13 | 1 |
| 263 | 43.97 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 9 | 4 |
| 265 | 43.97 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 9 | 4 |
| 284 | 44.01 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 287 | 44.01 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 335 | 44.12 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 6 | 1 |
| 372 | 44.19 | atmosphere | 1005.0 | 720 | < th | dose independent | rect. | 19 | 6 |
| 418 | 44.26 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 13 | 1 |
| 468 | 44.33 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 493 | 44.36 | humidity | 90.0 | 4320 | > th | dose independent | rect. | 6 | 1 |
| 524 | 44.40 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 2 |
| 533 | 44.42 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 2 |
| 648 | 44.58 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 5 | 3 |
| 656 | 44.59 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 8 | 6 |
| 696 | 44.63 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 8 | 21 |
| 717 | 44.67 | wind | 7.0 | 4320 | > th | dose independent | rect. | 15 | 4 |
| 725 | 44.67 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 736 | 44.67 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 22 | 10 |
| 771 | 44.71 | wind | 7.0 | 4320 | > th | dose independent | rect. | 15 | 1 |
| 772 | 44.71 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 782 | 44.71 | temperature | 20.0 | 720 | > th | dose independent | rect. | 21 | 23 |
| 868 | 44.80 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 23 | 14 |
| 870 | 44.81 | temperature | 20.0 | 720 | > th | dose independent | no | NA | NA |
| 885 | 44.82 | temperature | 20.0 | 720 | > th | dose independent | rect. | 6 | 23 |
| 888 | 44.82 | temperature | 10.0 | 270 | > th | dose dependent | sin | 7 | NA |
| 893 | 44.83 | wind | 7.0 | 4320 | < th | dose independent | rect. | 15 | 4 |
| 902 | 44.84 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 924 | 44.86 | wind | 7.0 | 4320 | < th | dose independent | rect. | 15 | 2 |
| 938 | 44.87 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 953 | 44.88 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 14 | 17 |
| 959 | 44.89 | temperature | 20.0 | 720 | < th | dose independent | no | NA | NA |