BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0264100 Os01g0264100|Os01g0264100
(646 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0264100 Similar to UTP--glucose-1-phosphate uridylyltr... 1259 0.0
Os09g0553200 Similar to UTP--glucose-1-phosphate uridylyltr... 453 e-127
Os02g0117700 Similar to UTP--glucose-1-phosphate uridylyltr... 439 e-123
>Os01g0264100 Similar to UTP--glucose-1-phosphate uridylyltransferase (EC
2.7.7.9) (UDP-glucose pyrophosphorylase) (UDPGP)
(UGPase)
Length = 646
Score = 1259 bits (3258), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 612/646 (94%), Positives = 612/646 (94%)
Query: 1 MTRHARETFLMALTTFSFLATFPWLDLMAWRMDEYLSWIRPKLLRVAASLNGTTGCSARR 60
MTRHARETFLMALTTFSFLATFPWLDLMAWRMDEYLSWIRPKLLRVAASLNGTTGCSARR
Sbjct: 1 MTRHARETFLMALTTFSFLATFPWLDLMAWRMDEYLSWIRPKLLRVAASLNGTTGCSARR 60
Query: 61 RAAPRDEDKDSFMHLVSRYLIREEKEMIDWNKVERPTPEMVVPYDSLVQAPRDIPEIRXX 120
RAAPRDEDKDSFMHLVSRYLIREEKEMIDWNKVERPTPEMVVPYDSLVQAPRDIPEIR
Sbjct: 61 RAAPRDEDKDSFMHLVSRYLIREEKEMIDWNKVERPTPEMVVPYDSLVQAPRDIPEIRNL 120
Query: 121 XXXXXXXXXXXXXXTTMECVAPKCTIEVRSGLTFLDLAIMQTEIVEKYTNIEIHTFNQNK 180
TTMECVAPKCTIEVRSGLTFLDLAIMQTEIVEKYTNIEIHTFNQNK
Sbjct: 121 LNKLAVLKLNGGLGTTMECVAPKCTIEVRSGLTFLDLAIMQTEIVEKYTNIEIHTFNQNK 180
Query: 181 YPRIITEKFLPLSSEGSTGSHCWYPPGHGDVFFSLCKSGILDTMLSQGKEYVFIASSENL 240
YPRIITEKFLPLSSEGSTGSHCWYPPGHGDVFFSLCKSGILDTMLSQGKEYVFIASSENL
Sbjct: 181 YPRIITEKFLPLSSEGSTGSHCWYPPGHGDVFFSLCKSGILDTMLSQGKEYVFIASSENL 240
Query: 241 GATVDIEIESLTSTEILNHLIHNKNEYCMELLEIFQVPYENVAFGYRRVNLKAIKRLVKA 300
GATVDIEIESLTSTEILNHLIHNKNEYCMELLEIFQVPYENVAFGYRRVNLKAIKRLVKA
Sbjct: 241 GATVDIEIESLTSTEILNHLIHNKNEYCMELLEIFQVPYENVAFGYRRVNLKAIKRLVKA 300
Query: 301 EALKMEIIPNLKEVDGVKVLQLEKEAGSAIQCFEKAIGVTVPRSRFLAVKNTSDLFLILS 360
EALKMEIIPNLKEVDGVKVLQLEKEAGSAIQCFEKAIGVTVPRSRFLAVKNTSDLFLILS
Sbjct: 301 EALKMEIIPNLKEVDGVKVLQLEKEAGSAIQCFEKAIGVTVPRSRFLAVKNTSDLFLILS 360
Query: 361 DLYIVMDGTVTRNPARDNSTNPLIDLGPEFRKVDSFLDRFKSIPSIVALDSLKISGDVWF 420
DLYIVMDGTVTRNPARDNSTNPLIDLGPEFRKVDSFLDRFKSIPSIVALDSLKISGDVWF
Sbjct: 361 DLYIVMDGTVTRNPARDNSTNPLIDLGPEFRKVDSFLDRFKSIPSIVALDSLKISGDVWF 420
Query: 421 GSRITLKGEVTIAAQLGLKLDILDGSVFDNKHSTHSSGAIKYTMKLDEGADCASIDSALN 480
GSRITLKGEVTIAAQLGLKLDILDGSVFDNKHSTHSSGAIKYTMKLDEGADCASIDSALN
Sbjct: 421 GSRITLKGEVTIAAQLGLKLDILDGSVFDNKHSTHSSGAIKYTMKLDEGADCASIDSALN 480
Query: 481 RLNPGSTLILKKDDFYRYIDPIQARNRAMFHSESNCIITATLKDNWFAKLVQGKLWLIIL 540
RLNPGSTLILKKDDFYRYIDPIQARNRAMFHSESNCIITATLKDNWFAKLVQGKLWLIIL
Sbjct: 481 RLNPGSTLILKKDDFYRYIDPIQARNRAMFHSESNCIITATLKDNWFAKLVQGKLWLIIL 540
Query: 541 VFHQFKXXXXXXXXXXXXXXXXXXSIHQDIQSYLDNYSDSDMWHLIVHSVARVISNVLED 600
VFHQFK SIHQDIQSYLDNYSDSDMWHLIVHSVARVISNVLED
Sbjct: 541 VFHQFKLLSRRRLRWGERRRRTLRSIHQDIQSYLDNYSDSDMWHLIVHSVARVISNVLED 600
Query: 601 VNRKYMKNHYLGFLAIHSTVFAIEVIGSYAVELNYDIEHYAEPPEL 646
VNRKYMKNHYLGFLAIHSTVFAIEVIGSYAVELNYDIEHYAEPPEL
Sbjct: 601 VNRKYMKNHYLGFLAIHSTVFAIEVIGSYAVELNYDIEHYAEPPEL 646
>Os09g0553200 Similar to UTP--glucose-1-phosphate uridylyltransferase (EC
2.7.7.9) (UDP-glucose pyrophosphorylase) (UDPGP)
(UGPase)
Length = 469
Score = 453 bits (1165), Expect = e-127, Method: Compositional matrix adjust.
Identities = 250/448 (55%), Positives = 296/448 (66%), Gaps = 72/448 (16%)
Query: 66 DEDKDSFMHLVSRYLIREEKEMIDWNKVERPTPEMVVPYDSLVQAPRDIPEIRXXXXXXX 125
+ +K F+ LVSRYL E E I+W+K++ PT E+VVPYD+L AP D+ E +
Sbjct: 24 ENEKSGFISLVSRYL-SGEAEQIEWSKIQTPTDEVVVPYDTLSAAPEDLNETKKLLDKLV 82
Query: 126 XXXXXXXXXTTMECVAPKCTIEVRSGLTFLDLAIMQTE---------------------- 163
TTM C PK IEVR+G TFLDL ++Q E
Sbjct: 83 VLKLNGGLGTTMGCTGPKSVIEVRNGFTFLDLIVIQIESLNKKYGCNVPLLLMNSFNTHD 142
Query: 164 ----IVEKYTN--IEIHTFNQNKYPRIITEKFLPLSSEGSTGSHCWYPPGHGDVFFSLCK 217
IVEKY+N IEIHTFNQ++YPRI+TE FLPL S+G TG WYPPGHGDVF SL
Sbjct: 143 DTQKIVEKYSNSNIEIHTFNQSQYPRIVTEDFLPLPSKGKTGKDGWYPPGHGDVFPSLNN 202
Query: 218 SGILDTMLSQGKEYVFIASSENLGATVDIEIESLTSTEILNHLIHNKNEYCME------- 270
SG LDT+L+QGKEYVF+A+S+NLGA VDI+I LNHLIHN+NEYCME
Sbjct: 203 SGKLDTLLAQGKEYVFVANSDNLGAIVDIKI--------LNHLIHNQNEYCMEVTPKTLA 254
Query: 271 ---------------LLEIFQVPYENVA----------FGYRR--VNLKAIKRLVKAEAL 303
LLEI QVP E+V F VNLKAIKRLV+AEAL
Sbjct: 255 DVKGGTLISYEGRVQLLEIAQVPDEHVNEFKSIEKFKIFNTNNLWVNLKAIKRLVEAEAL 314
Query: 304 KMEIIPNLKEVDGVKVLQLEKEAGSAIQCFEKAIGVTVPRSRFLAVKNTSDLFLILSDLY 363
KMEIIPN KEVDGVKVLQLE AG+AI+ FEKAIG+ VPRSRFL VK TSDL L+ SDLY
Sbjct: 315 KMEIIPNPKEVDGVKVLQLETAAGAAIRFFEKAIGINVPRSRFLPVKATSDLLLVQSDLY 374
Query: 364 IVMDGTVTRNPARDNSTNPLIDLGPEFRKVDSFLDRFKSIPSIVALDSLKISGDVWFGSR 423
++DG V RNPAR N +NP I+LGPEF+KV +FL RFKSIPSIV LD+LK+SGDVWFGS
Sbjct: 375 TLVDGFVIRNPARTNPSNPSIELGPEFKKVANFLARFKSIPSIVELDTLKVSGDVWFGSG 434
Query: 424 ITLKGEVTIAAQLGLKLDILDGSVFDNK 451
+TLKG+VTI A+ G KL+I DG+V +NK
Sbjct: 435 VTLKGKVTITAKSG-KLEIPDGAVLENK 461
>Os02g0117700 Similar to UTP--glucose-1-phosphate uridylyltransferase (EC
2.7.7.9) (UDP-glucose pyrophosphorylase) (UDPGP)
(UGPase)
Length = 467
Score = 439 bits (1130), Expect = e-123, Method: Compositional matrix adjust.
Identities = 241/448 (53%), Positives = 289/448 (64%), Gaps = 71/448 (15%)
Query: 66 DEDKDSFMHLVSRYLIREEKEMIDWNKVERPTPEMVVPYDSLVQAPRDIPEIRXXXXXXX 125
D +K F+ LV+RYL EE E ++W K+ PT E+VVPYD+L P D+ E +
Sbjct: 21 DNEKSGFISLVARYLSGEE-EHVEWAKIHTPTDEVVVPYDTLAAPPEDLEETKKLLNKLA 79
Query: 126 XXXXXXXXXTTMECVAPKCTIEVRSGLTFLDLAIMQTE---------------------- 163
TTM C PK IEVR+G TFLDL ++Q E
Sbjct: 80 VLKLNGGLGTTMGCTGPKSVIEVRNGFTFLDLIVIQIESLNKKYGSNVPLLLMNSFNTHE 139
Query: 164 ----IVEKYTN--IEIHTFNQNKYPRIITEKFLPLSSEGSTGSHCWYPPGHGDVFFSLCK 217
IVEKYTN IE+HTFNQ++YPR++ ++FLP S+G T WYPPGHGD+F SL
Sbjct: 140 DTLKIVEKYTNSNIEVHTFNQSQYPRVVADEFLPWPSKGKTCKDGWYPPGHGDIFPSLMN 199
Query: 218 SGILDTMLSQGKEYVFIASSENLGATVDIEIESLTSTEILNHLIHNKNEYCME------- 270
SG LD +LSQGKEYVFIA+S+NLGA VD++I LNHLIH +NEYCME
Sbjct: 200 SGKLDLLLSQGKEYVFIANSDNLGAIVDMKI--------LNHLIHKQNEYCMEVTPKTLA 251
Query: 271 ---------------LLEIFQVPYENVA----------FGYRR--VNLKAIKRLVKAEAL 303
LLEI QVP +V F VNLKAIKRLV+A+AL
Sbjct: 252 DVKGGTLISYEDKVQLLEIAQVPDAHVNEFKSIEKFKIFNTNNLWVNLKAIKRLVEADAL 311
Query: 304 KMEIIPNLKEVDGVKVLQLEKEAGSAIQCFEKAIGVTVPRSRFLAVKNTSDLFLILSDLY 363
KMEIIPN KEVDGVKVLQLE AG+AI+ F+ AIG+ VPRSRFL VK TSDL L+ SDLY
Sbjct: 312 KMEIIPNPKEVDGVKVLQLETAAGAAIRFFDHAIGINVPRSRFLPVKATSDLQLVQSDLY 371
Query: 364 IVMDGTVTRNPARDNSTNPLIDLGPEFRKVDSFLDRFKSIPSIVALDSLKISGDVWFGSR 423
++DG VTRNPAR N +NP I+LGPEF+KV FL RFKSIPSIV LD+LK+SGDVWFGS
Sbjct: 372 TLVDGFVTRNPARTNPSNPSIELGPEFKKVGCFLGRFKSIPSIVELDTLKVSGDVWFGSS 431
Query: 424 ITLKGEVTIAAQLGLKLDILDGSVFDNK 451
ITLKG+VTI AQ G+KL+I DG+V +NK
Sbjct: 432 ITLKGKVTITAQPGVKLEIPDGAVIENK 459
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.321 0.136 0.405
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 19,865,498
Number of extensions: 773699
Number of successful extensions: 1714
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 1699
Number of HSP's successfully gapped: 3
Length of query: 646
Length of database: 17,035,801
Length adjustment: 107
Effective length of query: 539
Effective length of database: 11,448,903
Effective search space: 6170958717
Effective search space used: 6170958717
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 159 (65.9 bits)