BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os01g0187400 Os01g0187400|AK099852
         (1431 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os01g0187400  Conserved hypothetical protein                     2516   0.0  
Os04g0182600  Conserved hypothetical protein                      237   6e-62
Os05g0185600  Hypothetical protein                                182   1e-45

>Os01g0187400 Conserved hypothetical protein
          Length = 1431

 Score = 2516 bits (6521), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1249/1398 (89%), Positives = 1249/1398 (89%)

Query: 34   TDREAPDPYSILTWHDYXXXXXXXXXXXXVAPAATCEGDLHGKGNFSTRCEVSEEVELGG 93
            TDREAPDPYSILTWHDY            VAPAATCEGDLHGKGNFSTRCEVSEEVELGG
Sbjct: 34   TDREAPDPYSILTWHDYSPPSPPPPPPPPVAPAATCEGDLHGKGNFSTRCEVSEEVELGG 93

Query: 94   DVYITGEGSLVLLAGAALTCQRPGCVISANLSGEVRLGRGVRVIAGRVSLAAANVTIADT 153
            DVYITGEGSLVLLAGAALTCQRPGCVISANLSGEVRLGRGVRVIAGRVSLAAANVTIADT
Sbjct: 94   DVYITGEGSLVLLAGAALTCQRPGCVISANLSGEVRLGRGVRVIAGRVSLAAANVTIADT 153

Query: 154  VVVNTTALAGDPPERTSXXXXXXXXXXXXXXXXXASCYVKDGQTQEDSWGGDAYAWSDLE 213
            VVVNTTALAGDPPERTS                 ASCYVKDGQTQEDSWGGDAYAWSDLE
Sbjct: 154  VVVNTTALAGDPPERTSGVPTGTHGDGGGHGGRGASCYVKDGQTQEDSWGGDAYAWSDLE 213

Query: 214  HPFSYGSKGGSTSVEKDYGGSGGGIVWLYADDLIMNGTVLADXXXXXXXXXXXXXXXIYI 273
            HPFSYGSKGGSTSVEKDYGGSGGGIVWLYADDLIMNGTVLAD               IYI
Sbjct: 214  HPFSYGSKGGSTSVEKDYGGSGGGIVWLYADDLIMNGTVLADGGDSSEKGGGGSGGSIYI 273

Query: 274  KSKTMHGAGKISASXXXXXXXXXXXRVSINVFSRHDDTQVFAHGGKSSGCPDNAGAAGTL 333
            KSKTMHGAGKISAS           RVSINVFSRHDDTQVFAHGGKSSGCPDNAGAAGTL
Sbjct: 274  KSKTMHGAGKISASGGNGLAGGGGGRVSINVFSRHDDTQVFAHGGKSSGCPDNAGAAGTL 333

Query: 334  YEAVPKSLVVSNNNLSTQTDTLLLEFPNQPLWTNVFVKNHAKVAVPLLWSRVQVQGQLSL 393
            YEAVPKSLVVSNNNLSTQTDTLLLEFPNQPLWTNVFVKNHAKVAVPLLWSRVQVQGQLSL
Sbjct: 334  YEAVPKSLVVSNNNLSTQTDTLLLEFPNQPLWTNVFVKNHAKVAVPLLWSRVQVQGQLSL 393

Query: 394  LSGAILTFGLTRYPYSEFELMAEELLMSDSTIKVFGALRMSVKMLLMWNSKMLIDGGGDS 453
            LSGAILTFGLTRYPYSEFELMAEELLMSDSTIKVFGALRMSVKMLLMWNSKMLIDGGGDS
Sbjct: 394  LSGAILTFGLTRYPYSEFELMAEELLMSDSTIKVFGALRMSVKMLLMWNSKMLIDGGGDS 453

Query: 454  IVATSLLDASNLIVLKESSVIHSNANLGVRGQGLLNLSGEGDIIEAQRLILSLFYSIKVG 513
            IVATSLLDASNLIVLKESSVIHSNANLGVRGQGLLNLSGEGDIIEAQRLILSLFYSIKVG
Sbjct: 454  IVATSLLDASNLIVLKESSVIHSNANLGVRGQGLLNLSGEGDIIEAQRLILSLFYSIKVG 513

Query: 514  PGSILRGPLVNGSSGDVAPKLNCDDDICPVEIIHPPEDCNLNSSLSFTLQVCRVEDIDIW 573
            PGSILRGPLVNGSSGDVAPKLNCDDDICPVEIIHPPEDCNLNSSLSFTLQVCRVEDIDIW
Sbjct: 514  PGSILRGPLVNGSSGDVAPKLNCDDDICPVEIIHPPEDCNLNSSLSFTLQVCRVEDIDIW 573

Query: 574  GLVQGTVIHFNRARSVSVHTSGTISATGLGCRSGVGQGKILNSXXXXXXXXXXXXXXXFY 633
            GLVQGTVIHFNRARSVSVHTSGTISATGLGCRSGVGQGKILNS               FY
Sbjct: 574  GLVQGTVIHFNRARSVSVHTSGTISATGLGCRSGVGQGKILNSGVSGGGGHGGRGGDGFY 633

Query: 634  NESHAEGGSMYGSADLPCELGSGSGNDTTKLSTAGGGIIVMGSWEYSLPSLSLYGSVESN 693
            NESHAEGGSMYGSADLPCELGSGSGNDTTKLSTAGGGIIVMGSWEYSLPSLSLYGSVESN
Sbjct: 634  NESHAEGGSMYGSADLPCELGSGSGNDTTKLSTAGGGIIVMGSWEYSLPSLSLYGSVESN 693

Query: 694  GQSSTDVVTNASIXXXXXXXXXTILLFVRXXXXXXXXXXXXVXXXXXXXXXXXXXXRIHF 753
            GQSSTDVVTNASI         TILLFVR            V              RIHF
Sbjct: 694  GQSSTDVVTNASIGGPGGGSGGTILLFVRALSLAESSILSSVGGLGNFGSGGGGGGRIHF 753

Query: 754  HWSNIPTGDEYVPVAAVKGSIRTSGGISKGKGFPGENGTVTGKACPKGLYGTFCKECPLG 813
            HWSNIPTGDEYVPVAAVKGSIRTSGGISKGKGFPGENGTVTGKACPKGLYGTFCKECPLG
Sbjct: 754  HWSNIPTGDEYVPVAAVKGSIRTSGGISKGKGFPGENGTVTGKACPKGLYGTFCKECPLG 813

Query: 814  TYKNVTGSSKSLCVQCPPDELPHRAIYTSVRGGAYETPCPYKCVSDRYRMPHCYTALEEL 873
            TYKNVTGSSKSLCVQCPPDELPHRAIYTSVRGGAYETPCPYKCVSDRYRMPHCYTALEEL
Sbjct: 814  TYKNVTGSSKSLCVQCPPDELPHRAIYTSVRGGAYETPCPYKCVSDRYRMPHCYTALEEL 873

Query: 874  IYTFGGPWLFXXXXXXXXXXXXXXXXXXRMKFVGTDELPGPAPTQQGSQIDHSFPFLESL 933
            IYTFGGPWLF                  RMKFVGTDELPGPAPTQQGSQIDHSFPFLESL
Sbjct: 874  IYTFGGPWLFGLLLSGLLVLLALVLSVARMKFVGTDELPGPAPTQQGSQIDHSFPFLESL 933

Query: 934  NEVLETNRAEESHGHVHRMYFMGPNTFSEPWHLPHTPPEQISEIVYEDAFNRFVDEINTL 993
            NEVLETNRAEESHGHVHRMYFMGPNTFSEPWHLPHTPPEQISEIVYEDAFNRFVDEINTL
Sbjct: 934  NEVLETNRAEESHGHVHRMYFMGPNTFSEPWHLPHTPPEQISEIVYEDAFNRFVDEINTL 993

Query: 994  AAYQWWEGSIHSILCVLAYPLAWSWXXXXXXXXXXXXXEFVRSEYDHSCLRSCRSRALYE 1053
            AAYQWWEGSIHSILCVLAYPLAWSW             EFVRSEYDHSCLRSCRSRALYE
Sbjct: 994  AAYQWWEGSIHSILCVLAYPLAWSWQQFRRRKKLQRLREFVRSEYDHSCLRSCRSRALYE 1053

Query: 1054 GLKVTATPDLMLGYLDFFLGGDEKRPDLPPRLRQRFPMCLIFGGDGSYMAPFSLHSDSVL 1113
            GLKVTATPDLMLGYLDFFLGGDEKRPDLPPRLRQRFPMCLIFGGDGSYMAPFSLHSDSVL
Sbjct: 1054 GLKVTATPDLMLGYLDFFLGGDEKRPDLPPRLRQRFPMCLIFGGDGSYMAPFSLHSDSVL 1113

Query: 1114 TSLMSQAVPSSIWHRLVAGLNAQLRLVRRGSLRGTFLPVLDWLETHANPSLGVNGVRVDL 1173
            TSLMSQAVPSSIWHRLVAGLNAQLRLVRRGSLRGTFLPVLDWLETHANPSLGVNGVRVDL
Sbjct: 1114 TSLMSQAVPSSIWHRLVAGLNAQLRLVRRGSLRGTFLPVLDWLETHANPSLGVNGVRVDL 1173

Query: 1174 AWFQATALGYCQLGLVVYAVEEPMSAELDGSPRIKIEQHSLTQNMHADTQLGHSRIKEAL 1233
            AWFQATALGYCQLGLVVYAVEEPMSAELDGSPRIKIEQHSLTQNMHADTQLGHSRIKEAL
Sbjct: 1174 AWFQATALGYCQLGLVVYAVEEPMSAELDGSPRIKIEQHSLTQNMHADTQLGHSRIKEAL 1233

Query: 1234 MRKRITGGILDSNSLRTLKDRRDLFYPFSLILHNTKPVGHQDLVGLVISILLLADFSLVL 1293
            MRKRITGGILDSNSLRTLKDRRDLFYPFSLILHNTKPVGHQDLVGLVISILLLADFSLVL
Sbjct: 1234 MRKRITGGILDSNSLRTLKDRRDLFYPFSLILHNTKPVGHQDLVGLVISILLLADFSLVL 1293

Query: 1294 LTFLQLYSYSMADXXXXXXXXXXXXXSPFPAGINALFSHGPRRSAGLARVYALWNITSLV 1353
            LTFLQLYSYSMAD             SPFPAGINALFSHGPRRSAGLARVYALWNITSLV
Sbjct: 1294 LTFLQLYSYSMADVLLVLFVLPLGILSPFPAGINALFSHGPRRSAGLARVYALWNITSLV 1353

Query: 1354 NVVVAFACGLVHYKSSTKRHPSTQPWNLGTDESGWWLFPTGLMLLKCIQARLVDWHVANL 1413
            NVVVAFACGLVHYKSSTKRHPSTQPWNLGTDESGWWLFPTGLMLLKCIQARLVDWHVANL
Sbjct: 1354 NVVVAFACGLVHYKSSTKRHPSTQPWNLGTDESGWWLFPTGLMLLKCIQARLVDWHVANL 1413

Query: 1414 EIQDRAVYSNDPSIFWQS 1431
            EIQDRAVYSNDPSIFWQS
Sbjct: 1414 EIQDRAVYSNDPSIFWQS 1431



>Os04g0182600 Conserved hypothetical protein
          Length = 383

 Score =  237 bits (604), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 135/325 (41%), Positives = 189/325 (58%), Gaps = 6/325 (1%)

Query: 64  APAATCEGDLHGKGNFSTRCEVSEEVELGGDVYITGEGSLVLLAGAALTCQRPGCVISAN 123
           A + +CE +++G G+F T C +     L GD+ + G+GS+V+     + C   GC I+ N
Sbjct: 62  ARSRSCE-EMNGSGSFDTTCVIGSSSSLDGDLCVYGDGSVVISPHVKIICPVAGCYIAIN 120

Query: 124 LSGEVRLGRGVRVIAGRVSLAAANVTIADTVVVNTTALAGDPPERTSXXXXXXXXXXXXX 183
           +SG + +G  V +IAG VSL A NV++     VNTT LAG+PP +TS             
Sbjct: 121 VSGSITIGEHVDLIAGSVSLYATNVSLDQRSTVNTTGLAGEPPPQTSGTPHSLEGAGGGH 180

Query: 184 XXXXASCYVKDGQTQEDSWGGDAYAWSDLEHPFSYGSKGGSTSVEKDYGGSGGGIVWLYA 243
               ASC V +    + +WGGD YAWS L  P+SYGSKGGS + +  +GG GGG V L A
Sbjct: 181 GGRGASCKVSN----DTNWGGDVYAWSTLAWPWSYGSKGGSMAADHQFGGDGGGRVMLRA 236

Query: 244 DDLI-MNGTVLADXXXXXXXXXXXXXXXIYIKSKTMHGAGKISASXXXXXXXXXXXRVSI 302
            + + ++G VLA+               I I +  ++G G ISA+           R+S+
Sbjct: 237 SEFMNVDGDVLAEGGVGSLKGGGGSGGSIMIYAFKLYGNGTISAAGGNGWGGGGGGRISL 296

Query: 303 NVFSRHDDTQVFAHGGKSSGCPDNAGAAGTLYEAVPKSLVVSNNNLSTQTDTLLLEFPNQ 362
           + +S   D ++  HGG+S GCP NAGAAGT+YE+  ++L VSN N +T T+T LL FP  
Sbjct: 297 DCYSIQQDLEITVHGGQSFGCPQNAGAAGTIYESSLQTLKVSNGNYTTHTETPLLGFPMT 356

Query: 363 PLWTNVFVKNHAKVAVPLLWSRVQV 387
            LW+NV V+ +AKV VPLLWSRVQV
Sbjct: 357 RLWSNVLVECNAKVLVPLLWSRVQV 381



>Os05g0185600 Hypothetical protein
          Length = 172

 Score =  182 bits (462), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 91/109 (83%), Positives = 93/109 (85%)

Query: 1274 QDLVGLVISILLLADFSLVLLTFLQLYSYSMADXXXXXXXXXXXXXSPFPAGINALFSHG 1333
            QDLVGLVISILLLADFSLVLLTFLQLYSYSM D             +PFPAGINALFSHG
Sbjct: 63   QDLVGLVISILLLADFSLVLLTFLQLYSYSMIDVLLVLFVLPLGILAPFPAGINALFSHG 122

Query: 1334 PRRSAGLARVYALWNITSLVNVVVAFACGLVHYKSSTKRHPSTQPWNLG 1382
            PRRSAGLARVYALWNITSLVNV+VAFACGLVHYKSS KRHPS QPWNLG
Sbjct: 123  PRRSAGLARVYALWNITSLVNVIVAFACGLVHYKSSAKRHPSMQPWNLG 171




 Score =  122 bits (306), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 57/63 (90%), Positives = 59/63 (93%)

Query: 1057 VTATPDLMLGYLDFFLGGDEKRPDLPPRLRQRFPMCLIFGGDGSYMAPFSLHSDSVLTSL 1116
            V ATPDLMLGYLDFFLGGDEKRPDLPPRL QR PM LIFGGDGSYMAPFSLHSDSV+TSL
Sbjct: 1    VAATPDLMLGYLDFFLGGDEKRPDLPPRLHQRLPMSLIFGGDGSYMAPFSLHSDSVVTSL 60

Query: 1117 MSQ 1119
            +SQ
Sbjct: 61   ISQ 63



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.319    0.136    0.420 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 47,443,736
Number of extensions: 2023937
Number of successful extensions: 4343
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 4333
Number of HSP's successfully gapped: 4
Length of query: 1431
Length of database: 17,035,801
Length adjustment: 113
Effective length of query: 1318
Effective length of database: 11,135,619
Effective search space: 14676745842
Effective search space used: 14676745842
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 162 (67.0 bits)