Os05g0185600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os05g0185600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 34.87 | 0.277 | 8.54 | -0.0687 | 0.21 | -1.51 | 0.133 | -1.32 | -0.0119 | 4.51 | 28.2 | 10 | -- | -- |
| 37.09 | 0.284 | 8.55 | -0.263 | 0.244 | -1.49 | -0.158 | -- | -0.00899 | 4.72 | 30.95 | 17 | -- | -- |
| 34.91 | 0.275 | 8.54 | -0.08 | 0.206 | -1.51 | -- | -1.26 | -0.0158 | 4.65 | 28.11 | 11 | -- | -- |
| 37.04 | 0.283 | 8.56 | -0.285 | 0.24 | -1.55 | -- | -- | -0.0273 | 4.61 | 30.97 | 10 | -- | -- |
| 36.58 | 0.282 | 8.54 | -0.0371 | -- | -1.42 | -- | -1.3 | 0.00264 | -- | 27.55 | 10 | -- | -- |
| 67.12 | 0.384 | 8.49 | 0.0538 | 0.347 | -- | 0.404 | -- | 0.246 | 12.8 | -- | -- | -- | -- |
| 67.8 | 0.386 | 8.49 | 0.0684 | 0.346 | -- | -- | -- | 0.247 | 12.7 | -- | -- | -- | -- |
| 39.33 | 0.293 | 8.56 | -0.246 | -- | -1.34 | -- | -- | -0.04 | -- | 27.55 | 10 | -- | -- |
| 39.02 | 0.291 | 8.54 | -- | 0.205 | -1.43 | -- | -- | 0.0165 | 5.26 | 31.1 | 10 | -- | -- |
| 75.3 | 0.405 | 8.5 | 0.056 | -- | -- | -- | -- | 0.241 | -- | -- | -- | -- | -- |
| 67.92 | 0.386 | 8.49 | -- | 0.345 | -- | -- | -- | 0.24 | 12.7 | -- | -- | -- | -- |
| 40.57 | 0.297 | 8.55 | -- | -- | -1.27 | -- | -- | 0.0101 | -- | 28.22 | 2 | -- | -- |
| 75.38 | 0.405 | 8.5 | -- | -- | -- | -- | -- | 0.235 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 35.04 | temperature | 30 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 2 | 35.10 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 4 | 35.34 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 5 | 35.42 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 7 | 35.60 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 8 | 35.63 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 10 | 35.67 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 15 | 36.20 | temperature | 10 | 10 | > th | dose dependent | no | NA | NA |
| 17 | 36.31 | temperature | 30 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 18 | 36.33 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 23 | 36.52 | temperature | 30 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 27 | 36.70 | temperature | 30 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 29 | 36.72 | temperature | 30 | 270 | < th | dose dependent | rect. | 21 | 23 |
| 42 | 37.21 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 46 | 37.41 | temperature | 30 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 47 | 37.51 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 8 |
| 50 | 37.52 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 11 |
| 51 | 37.53 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 5 |
| 60 | 37.57 | temperature | 30 | 4320 | < th | dose dependent | rect. | 21 | 5 |
| 68 | 37.59 | temperature | 20 | 1440 | > th | dose dependent | rect. | 23 | 3 |
| 79 | 37.61 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 23 |
| 83 | 37.63 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 85 | 37.63 | temperature | 20 | 1440 | > th | dose dependent | rect. | 23 | 9 |
| 87 | 37.64 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 1 |
| 90 | 37.65 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 10 |
| 96 | 37.67 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 14 |
| 130 | 37.76 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 139 | 37.79 | temperature | 20 | 1440 | > th | dose dependent | sin | 11 | NA |
| 150 | 37.81 | temperature | 25 | 1440 | < th | dose dependent | sin | 15 | NA |
| 153 | 37.81 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 9 |
| 173 | 37.85 | temperature | 30 | 1440 | < th | dose dependent | sin | 12 | NA |
| 191 | 37.87 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 14 |
| 263 | 37.96 | temperature | 10 | 1440 | > th | dose dependent | sin | 11 | NA |
| 277 | 37.97 | temperature | 25 | 1440 | < th | dose dependent | rect. | 13 | 18 |
| 297 | 37.99 | temperature | 25 | 1440 | < th | dose dependent | rect. | 11 | 20 |
| 333 | 38.03 | temperature | 25 | 1440 | < th | dose dependent | rect. | 11 | 18 |
| 398 | 38.10 | temperature | 30 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 460 | 38.15 | temperature | 15 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 534 | 38.23 | temperature | 15 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 639 | 38.37 | temperature | 15 | 90 | > th | dose dependent | rect. | 3 | 23 |
| 658 | 38.39 | temperature | 25 | 1440 | < th | dose dependent | rect. | 13 | 23 |
| 767 | 38.50 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 792 | 38.53 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 23 |
| 843 | 38.57 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 23 |
| 860 | 38.59 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 23 |
| 913 | 38.64 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 20 |