BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0182100 Os01g0182100|AK066557
(455 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0182100 Protein of unknown function DUF1618 domain con... 914 0.0
Os01g0119500 Protein of unknown function DUF1618 domain con... 403 e-112
Os01g0123200 391 e-109
Os01g0119200 388 e-108
Os03g0247300 Protein of unknown function DUF1618 domain con... 183 3e-46
Os03g0725900 76 5e-14
Os03g0724800 Protein of unknown function DUF1618 domain con... 66 6e-11
>Os01g0182100 Protein of unknown function DUF1618 domain containing protein
Length = 455
Score = 914 bits (2363), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/455 (97%), Positives = 445/455 (97%)
Query: 1 MANPRPPYVLLERVVFFGGRELPDGTWKDAAGIVIGWSRARLLSRREAMEAMEPHPFLAD 60
MANPRPPYVLLERVVFFGGRELPDGTWKDAAGIVIGWSRARLLSRREAMEAMEPHPFLAD
Sbjct: 1 MANPRPPYVLLERVVFFGGRELPDGTWKDAAGIVIGWSRARLLSRREAMEAMEPHPFLAD 60
Query: 61 PPQVSSLRMMSPTPAHAQQLGSIRDGDIASTHKGIVVIYAGFYRPGCSDDLGGCYLLYDA 120
PPQVSSLRMMSPTPAHAQQLGSIRDGDIASTHKGIVVIYAGFYRPGCSDDLGGCYLLYDA
Sbjct: 61 PPQVSSLRMMSPTPAHAQQLGSIRDGDIASTHKGIVVIYAGFYRPGCSDDLGGCYLLYDA 120
Query: 121 PTNALTAIPPLPDSPRFPTLLHLGRTAVLVDASRSADDYILADIVTNSGLGLPEATIFAW 180
PTNALTAIPPLPDSPRFPTLLHLGRTAVLVDASRSADDYILADIVTNSGLGLPEATIFAW
Sbjct: 121 PTNALTAIPPLPDSPRFPTLLHLGRTAVLVDASRSADDYILADIVTNSGLGLPEATIFAW 180
Query: 181 SSLTMKKSGGEWVKSSIPRLPLPAHLCGPKHLFQIDLAFSLDSGRICWVDLLQGILFCDR 240
SSLTMKKSGGEWVKSSIPRLPLPAHLCGPKHLFQIDLAFSLDSGRICWVDLLQGILFCDR
Sbjct: 181 SSLTMKKSGGEWVKSSIPRLPLPAHLCGPKHLFQIDLAFSLDSGRICWVDLLQGILFCDR 240
Query: 241 ILAPDGPKLGFIPLPTGYCIDVHHRLRHQMMPLARRSMACVSGAVKFVALVGLEDIHCPP 300
ILAPDGPKLGFIPLPTGYCIDVHHRLRHQMMPLARRSMACVSGAVKFVALVGLEDIHCPP
Sbjct: 241 ILAPDGPKLGFIPLPTGYCIDVHHRLRHQMMPLARRSMACVSGAVKFVALVGLEDIHCPP 300
Query: 301 NEVMLKTWVLSPDFKEWKEDSRSLSVEEMWASESFKQMGLPCXXXXXXXXXXTQDGVMYT 360
NEVMLKTWVLSPDFKEWKEDSRSLSVEEMWASESFKQMGLPC TQDGVMYT
Sbjct: 301 NEVMLKTWVLSPDFKEWKEDSRSLSVEEMWASESFKQMGLPCVVPVSPVLSLTQDGVMYT 360
Query: 361 ILNVIEQVPAQVDEFGIVVVDDDLVPIANYMIRFDIRRNKVLSSTKISQHGELQWLIPNL 420
ILNVIEQVPAQVDEFGIVVVDDDLVPIANYMIRFDIRRNKVLSSTKISQHGELQWLIPNL
Sbjct: 361 ILNVIEQVPAQVDEFGIVVVDDDLVPIANYMIRFDIRRNKVLSSTKISQHGELQWLIPNL 420
Query: 421 IATDFTAYLQDHQRAEEAGKVGASAKGKRKQMEYY 455
IATDFTAYLQDHQRAEEAGKVGASAKGKRKQMEYY
Sbjct: 421 IATDFTAYLQDHQRAEEAGKVGASAKGKRKQMEYY 455
>Os01g0119500 Protein of unknown function DUF1618 domain containing protein
Length = 466
Score = 403 bits (1035), Expect = e-112, Method: Compositional matrix adjust.
Identities = 250/474 (52%), Positives = 306/474 (64%), Gaps = 47/474 (9%)
Query: 3 NPRPP-YVLLERVVFF--GGRELPDGTWKD---AAGIVIG---WSRARLLSRREAME--- 50
+PRPP VLLERVV F G +D AA I +G WS +++ E ME
Sbjct: 4 HPRPPPCVLLERVVRFVEAAGLTSGGASRDPDVAAIIEVGGWSWSTVQMMGSVEEMERLM 63
Query: 51 --AMEPHPFLADPPQVSSLRMMSPTPAHAQQLGSIRDGDIASTHKGIVVIYAGFYRPGCS 108
+++P FL DPPQVSSL M+ P PA LG G+I+STHKGIVVIYA
Sbjct: 64 APSVKPVAFLGDPPQVSSLHMLLPPPASLDLLGI---GEISSTHKGIVVIYAD------- 113
Query: 109 DDLGGCYLLYDAPTNALTAIPPLPDS-PRFPTLLHLGRTAVLVDASRSADD-YILADIVT 166
CYLLYDA N LTAIPP+PDS P L LGR AVLV A+ + DD YI ADIVT
Sbjct: 114 ----KCYLLYDASNNHLTAIPPIPDSVTSAPIFLPLGRGAVLVSAAGADDDDYIFADIVT 169
Query: 167 NSGL-----GLPEATIFAWSSLTMKKSGGEWVKSSIPRLPLPAHLCGPKHLFQIDLAFSL 221
+ LP+ATIFA K+GGEW++SSIP LPLP HLCGP + F ID AFS
Sbjct: 170 SPSTRGINPALPKATIFA-----RVKNGGEWIQSSIPPLPLPPHLCGPTYFFHIDTAFSF 224
Query: 222 DSGRICWVDLLQGILFCDRILA-PDGPKLGFIPLPTGYCIDVHHRLRHQMMPLARRSMAC 280
+G I WVDLL+GIL CD IL+ P GP+L F+PLP +CID H + RH P RS+
Sbjct: 225 -AGTIFWVDLLKGILICDDILSSPQGPRLAFVPLP--HCIDAHDKPRHCFSPNEHRSIGR 281
Query: 281 VSGAVKFVALVGLEDIHCPPNEVMLKTWVLSPDFKEWKEDSRSLSVEEMWASESFKQMGL 340
VSGA+KF+AL+G + CP NEV LKTW LSPDFK WKE++ +L+V ++WASESF QMGL
Sbjct: 282 VSGAIKFLALIGYCEASCPENEVKLKTWSLSPDFKHWKEET-TLTVGDIWASESFNQMGL 340
Query: 341 PCXXXXXXXXXXTQDGVMYTILNVIEQVPA-QVDEFGIVVVDDDLVPIANYMIRFDIRRN 399
P +DG+MY +LN +++ P +++EFG + LVP ANYMIRFD+ +N
Sbjct: 341 PHVLPFSPVLSVNEDGIMYAVLNDVKKEPIPRLNEFGDSL-GMQLVPKANYMIRFDMLQN 399
Query: 400 KVLSSTKISQHGELQWLIPNLIATDFTAYLQDHQRAEEAGKVGASAKGKRKQME 453
KVLSSTKIS+ +WL +ATDF+AYLQD Q AE AGKVGASAKGKRK+M
Sbjct: 400 KVLSSTKISKKATSRWLTNTFLATDFSAYLQDRQNAEAAGKVGASAKGKRKRMS 453
>Os01g0123200
Length = 438
Score = 391 bits (1005), Expect = e-109, Method: Compositional matrix adjust.
Identities = 242/466 (51%), Positives = 299/466 (64%), Gaps = 51/466 (10%)
Query: 1 MANPRPP-YVLLERVVFF--GGRELPDGTWKDA---AGIVIG---WSRARLLSRREAME- 50
MA+PRPP VLLERVV F G +DA A I G WSR +++ E ME
Sbjct: 1 MADPRPPPCVLLERVVRFVEAAGLTSGGASRDADVAATIEAGGWSWSRVQMMGSAEEMER 60
Query: 51 ----AMEPHPFLADPPQVSSLRMMSPTPAHAQQLGSIRDGDIASTHKGIVVIYAGFYRPG 106
+++P FLADPPQ SSL M+ P PA LG G+I+ THKGIVVIYA +R
Sbjct: 61 RMAPSVKPVAFLADPPQASSLHMLLPPPARTTLLGI---GEISGTHKGIVVIYA--HR-- 113
Query: 107 CSDDLGGCYLLYDAPTNALTAIPPLPDSPRFPTLLHLGRTAVLVDASRSADD-YILADIV 165
CYLLYDA N LTAIPP+PDS P LGR+AVLV A+ + DD YILADIV
Sbjct: 114 -------CYLLYDASNNHLTAIPPVPDSVFVP----LGRSAVLVSAAGADDDDYILADIV 162
Query: 166 TNSGL-----GLPEATIFAWSSLTMKKSGGEWVKSSIPRLPLPAHLCGPKHLFQIDLAFS 220
T+ LP+ATIFA K+GGEW++SSIP LPLP HLCGP + F ID AFS
Sbjct: 163 TSCSRRGINPALPKATIFA-----RVKNGGEWIQSSIPHLPLPPHLCGPTYFFHIDTAFS 217
Query: 221 LDSGRICWVDLLQGILFCDRILA-PDGPKLGFIPLPTGYCIDVHHRLRHQMMPLARRSMA 279
+G I WVDLL+GIL CD IL+ P GP+L F+PL +CID H + RH P RS+
Sbjct: 218 F-AGTIFWVDLLKGILICDEILSSPQGPRLVFVPL--RHCIDAHDKPRHCFSPDGHRSIG 274
Query: 280 CVSGAVKFVALVGL-EDIHCPPNEVMLKTWVLSPDFKEWKEDSRSLSVEEMWASESFKQM 338
VSGA+KF+AL+G E+ CP NEV LKTW LSPDFK WKE++ +L+V ++WASESF QM
Sbjct: 275 RVSGAIKFLALIGYCEEASCPANEVKLKTWSLSPDFKHWKEET-TLTVGDIWASESFNQM 333
Query: 339 GLPCXXXXXXXXXXTQDGVMYTILNVIEQVP-AQVDEFGIVVVDDDLVPIANYMIRFDIR 397
GLP +DG+MY +LN +++ P +++EFG + LVP ANYMIRFD+
Sbjct: 334 GLPHVLPFSPLLGVNEDGIMYAVLNHVKEEPIPRLNEFGDSL-GIQLVPKANYMIRFDML 392
Query: 398 RNKVLSSTKISQHGELQWLIPNLIATDFTAYLQDHQRAEEAGKVGA 443
+NKVLSSTKIS+ +W +A+DF+AYLQD Q AE AGKV A
Sbjct: 393 QNKVLSSTKISKKPTFRWFTMTFLASDFSAYLQDRQNAEAAGKVPA 438
>Os01g0119200
Length = 380
Score = 388 bits (997), Expect = e-108, Method: Compositional matrix adjust.
Identities = 221/393 (56%), Positives = 266/393 (67%), Gaps = 30/393 (7%)
Query: 51 AMEPHPFLADPPQVSSLRMMSPTPAHAQQLGSIRDGDIASTHKGIVVIYAGFYRPGCSDD 110
AM+P PFLADPPQVSSL+M+ P P ++ G G+I+S H GIVVIYA Y
Sbjct: 8 AMKPVPFLADPPQVSSLQMLLP-PEYSHLAGI---GEISSIHNGIVVIYAHRY------- 56
Query: 111 LGGCYLLYDAPTNALTAIPPLPDSPRFPTLLHLGRTAVLVDASRSADDYILADIVTNSGL 170
YLLYDA N LTAIPPLPDS PT L LGRTAV+V A DDYILADIVT+S
Sbjct: 57 ----YLLYDASNNHLTAIPPLPDSLCSPTFLPLGRTAVVVTAGDDDDDYILADIVTSSTT 112
Query: 171 GLPEATIFAWSSLTMKKSGGEWVKSSIPRLPLPAHLCGPKHLFQIDLAFSLDSGRICWVD 230
GLP+A +F SS EW ++ RLPLP HLCGP + F +D AFS G I WVD
Sbjct: 113 GLPDAKLFVCSS------SSEWAETPPVRLPLPPHLCGPTYFFHVDTAFSFQ-GSIFWVD 165
Query: 231 LLQGILFCDRILAPDGPKLGFIPLPTGYCIDVHHRLRHQMMPLARRSMACVSGAVKFVAL 290
LL+GIL CD + +P+GP+L F+PLP +C DVH + RH P RS+ CVSGA+KFVAL
Sbjct: 166 LLKGILICDHVSSPEGPELVFVPLP--HCRDVHGKPRHCFSPNEHRSIGCVSGAIKFVAL 223
Query: 291 VGL-EDIHCPPNEVMLKTWVLSPDFKEWKEDSRSLSVEEMWASESFKQMGLPCXXXXXXX 349
+G E+ CP NEV LKTW LSPDFK WKE++ +L+V + WASESF ++GLP
Sbjct: 224 IGYCEEASCPANEVKLKTWSLSPDFKHWKEET-TLTVGDSWASESFNEIGLP-HVMPIPI 281
Query: 350 XXXTQDGVMYTILNVI--EQVPAQVDEFGIVVVDDDLVPIANYMIRFDIRRNKVLSSTKI 407
+DG+MY +LN I E +P V+EFG V+ D LV ANYMIRFDI +NKVLS TKI
Sbjct: 282 LSVNEDGIMYAVLNDIFQEPIPDHVNEFG-QVLGDRLVAKANYMIRFDILQNKVLSFTKI 340
Query: 408 SQHGELQWLIPNLIATDFTAYLQDHQRAEEAGK 440
SQHGEL+WL P LIATDF++YLQDH R E + K
Sbjct: 341 SQHGELRWLTPYLIATDFSSYLQDHTRGEASAK 373
>Os03g0247300 Protein of unknown function DUF1618 domain containing protein
Length = 446
Score = 183 bits (464), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 150/466 (32%), Positives = 223/466 (47%), Gaps = 45/466 (9%)
Query: 6 PPYVLLERVVFFGGRELPDGTWK-DAAGIVIGWSRARLLSRREA-MEAMEPHPFLADPPQ 63
P +VLL+RVV + + K ++ G + + ARL A M ++P+P +ADPP
Sbjct: 3 PAWVLLDRVVKPAVFDEEESKGKGESTGAPVKYLPARLRQEVPAGMRDVKPYPEVADPPI 62
Query: 64 VSSLRMMSPTPAHAQQLGSIRDGDIASTHKGIVVIYAGFYRPGCSDDLGGCYLLYDAPTN 123
+S M+ A + + S+R + K +V+ YAG PG S GC+L+YDA
Sbjct: 63 ISRFSMLISRKA-IRVVKSVR---VRCADKSLVLFYAGTGFPGFSSH--GCHLIYDAIDG 116
Query: 124 ALTAIPPLPDSPRFPT--LLHLGRTAVLVDASR-------SADDYILADIVTNSGLGLPE 174
+LTA+ P FP ++ +GR AVL A + Y++A+++ LP+
Sbjct: 117 SLTAVHTFP----FPVSGVVWVGRAAVLRHAGGGGGGGDGTTASYVIAELLRPFHGSLPD 172
Query: 175 ATIFAW---SSLTMKKSGGEWVKSSIPRLPLPAHLCGPKHLFQIDLAFSLDSGRICWVDL 231
AT+ W S + S G+WVK + LP +C F DL FS +CW DL
Sbjct: 173 ATLVMWLSNSPASTSGSNGQWVKEDVR---LPGEVCTGTDPFTTDLVFSFGESCLCWADL 229
Query: 232 LQGILFCDRILAPDGPKLGFIPLPTGYCIDVHHRLRHQMMPLARRSMACVSGAVKFVALV 291
GILFCD + P+ FIPLP D + MP RSM V+G ++ + +
Sbjct: 230 FMGILFCD-LATLRAPRFRFIPLPKACSFDPVGKYGRPHMP-EFRSMGRVNGVIRLIDME 287
Query: 292 GLEDIHCPPNEVMLKTWVLSPDFKEWKEDSRSLSVEEMWASESFKQMGLPCXXXXXXXXX 351
G + + +EV L W LS D EW E +V ++WASE F MGLP
Sbjct: 288 GFTNEYLAVDEVKLTIWTLSADLSEW-EKGPVCTVGDIWASEEFVAMGLPQLRPMCPVLS 346
Query: 352 XTQDGVMYTILNVIEQVPAQVDEFGIVVVDDD---LVPIANYMIRFDIRRNKVLSSTK-- 406
+ V+ ++ +E + V +F DD+ L A Y++ D+RR +VLS T+
Sbjct: 347 MVDEDVVCVVMTEVEIEESDVTDF-----DDEGNKLKFKAQYVLDIDVRRKRVLSITQHH 401
Query: 407 ISQHGELQWLIPNLIATDFTAY--LQDHQRAEEAGKVGASAKGKRK 450
I G+ LIP+LIA +FTAY L +A G G + + K
Sbjct: 402 IESMGD---LIPDLIACEFTAYSELSKGMQAMVEGNEGEESTKRMK 444
>Os03g0725900
Length = 476
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 108/406 (26%), Positives = 167/406 (41%), Gaps = 88/406 (21%)
Query: 58 LADPPQVSSL----------RMMSPTPAHAQ-QLGSIRDGDIA------------STHKG 94
L +PP +SSL R P P IRDGD++ + +
Sbjct: 64 LVEPPDLSSLYIRLPADELRRPRFPMPDSGNGDDDEIRDGDVSLSEGPLLRASVRAADEK 123
Query: 95 IVVIYAGFYRPGCSDDLGGCYLLYDAPTNALTAIPPLPD--SPRFP-------------- 138
+V++ + P C D YL+Y+A +L+ IP LP SP F
Sbjct: 124 LVILTSTL--PDC--DRASFYLIYNATKTSLSMIPLLPSYCSPSFTMRPLPMRRRSGGDG 179
Query: 139 -----TLLHLGRTAVLVDASRSADDYILADIVTNSGLGLPEATIFAWSSLTMKKSGGEWV 193
+L + RT+VL + +R D I D++ L P A S+ + SG +
Sbjct: 180 GDGDYSLAIMARTSVLDEQTR---DPIDRDVLC---LWPPPA-----SAKPLPLSGRRGI 228
Query: 194 KSSIPRLP-LPAHLCGPKHLFQIDLAFSLDSGRICWVDLLQGILFC--DRILAPDGP-KL 249
+ + P P+ G F D AF W DL G+L+C D +LA +
Sbjct: 229 EPWRVKQPHFPSQTPGS---FVADTAF--------WADLAHGVLYCNCDDVLAGGYDFQF 277
Query: 250 GFIPLPTGYCIDVHHRLRHQMMPLARRSMACVSGAVKFVALVGLEDIHCPPNEVMLKTWV 309
++ LP +D + P R+M+ V ++KFV++ + +H LK W
Sbjct: 278 HYLGLPMECRLDDVDSCTGRGNPAEHRTMSYVGDSIKFVSIG--DGLH-----PELKVWA 330
Query: 310 LSPDFKEWKEDSRSLSVEEMWASESFKQMGLPCXXXXXXXXXXTQDGVMYTILNVIEQVP 369
L P EWK+ LS+ +W E FK GLP QDGV+Y +L E
Sbjct: 331 LLPATMEWKK-LHELSMATLWGLEGFKNAGLPENLPIHPILSTQQDGVLYLVLPAEE--- 386
Query: 370 AQVDEFGIVVVDDDLVPIAN--YMIRFDIRRNKVLSSTKISQHGEL 413
+V+E +V V+++ V + Y+ D+ + LSS + G L
Sbjct: 387 -KVEEDIVVAVEEEDVAVTEQRYLFGLDVCNKRTLSSRHLPDSGYL 431
>Os03g0724800 Protein of unknown function DUF1618 domain containing protein
Length = 412
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 73/161 (45%), Gaps = 17/161 (10%)
Query: 213 FQIDLAFSLDSGRICWVDLLQGILFCDRILAPDGP-----------KLGFIPLPTGYCID 261
F FS G WVDL QGILFC G + G+I LP G C
Sbjct: 156 FTAHQTFSF-QGSAYWVDLGQGILFCSCHDLMSGTNNINNNDDDDLQFGYIQLPDG-CYV 213
Query: 262 VHHRLRHQMMPLARRSMACVSGAVKFVALVGLEDIHCPPNEVMLKTWVLSPDFKEWKEDS 321
L +P R + C+S +++FV++ G PP +++L W L+P ++W +
Sbjct: 214 GCDSLYLTHLPSQYRDIRCISDSIRFVSIEGYNTD--PPYDMLLSMWDLTPSSRQWHKVG 271
Query: 322 RSLSVEEMWASESFKQMGLPCXXXXXXXXXXT-QDGVMYTI 361
S+ V +W E F++ GLP + +DGV+Y +
Sbjct: 272 -SIHVGSLWEQEGFRRSGLPTNTSPTQPMLSSEEDGVVYLM 311
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.322 0.139 0.435
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 17,586,838
Number of extensions: 791006
Number of successful extensions: 2024
Number of sequences better than 1.0e-10: 9
Number of HSP's gapped: 1987
Number of HSP's successfully gapped: 9
Length of query: 455
Length of database: 17,035,801
Length adjustment: 104
Effective length of query: 351
Effective length of database: 11,605,545
Effective search space: 4073546295
Effective search space used: 4073546295
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 158 (65.5 bits)