Os03g0247300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF1618 domain containing protein.
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Os03g0247300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF1618 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 59.7 | 0.363 | 2.88 | -0.171 | 0.0762 | -0.179 | -0.158 | 0.83 | -0.089 | 11.2 | 90 | 1331 | -- | -- |
| 60.62 | 0.363 | 2.89 | -0.0845 | 0.125 | -0.187 | -0.11 | -- | -0.0705 | 10.9 | 89 | 1033 | -- | -- |
| 59.81 | 0.36 | 2.88 | -0.174 | 0.0775 | -0.182 | -- | 0.806 | -0.0897 | 11.1 | 90.34 | 1330 | -- | -- |
| 60.6 | 0.363 | 2.89 | -0.0874 | 0.121 | -0.196 | -- | -- | -0.0804 | 10.9 | 90.76 | 1038 | -- | -- |
| 60.04 | 0.361 | 2.88 | -0.181 | -- | -0.169 | -- | 0.867 | -0.086 | -- | 91.29 | 1372 | -- | -- |
| 61.2 | 0.367 | 2.88 | -0.111 | 0.0754 | -- | -0.126 | -- | -0.049 | 10.8 | -- | -- | -- | -- |
| 61.27 | 0.367 | 2.88 | -0.116 | 0.0762 | -- | -- | -- | -0.0494 | 10.7 | -- | -- | -- | -- |
| 61.24 | 0.364 | 2.89 | -0.0929 | -- | -0.157 | -- | -- | -0.0746 | -- | 91.35 | 1352 | -- | -- |
| 60.79 | 0.363 | 2.89 | -- | 0.122 | -0.234 | -- | -- | -0.0737 | 11.1 | 91.8 | 1049 | -- | -- |
| 61.63 | 0.367 | 2.89 | -0.117 | -- | -- | -- | -- | -0.0499 | -- | -- | -- | -- | -- |
| 61.62 | 0.367 | 2.88 | -- | 0.077 | -- | -- | -- | -0.0365 | 10.8 | -- | -- | -- | -- |
| 61.44 | 0.365 | 2.89 | -- | -- | -0.157 | -- | -- | -0.0645 | -- | 90 | 1718 | -- | -- |
| 61.99 | 0.367 | 2.88 | -- | -- | -- | -- | -- | -0.0368 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 52.58 | wind | 1 | 90 | < th | dose dependent | rect. | 12 | 1 |
| 2 | 52.98 | humidity | 90 | 30 | > th | dose independent | rect. | 13 | 1 |
| 12 | 52.98 | humidity | 90 | 30 | > th | dose dependent | rect. | 13 | 1 |
| 44 | 53.91 | wind | 1 | 90 | < th | dose independent | rect. | 12 | 1 |
| 50 | 56.07 | humidity | 60 | 1440 | > th | dose independent | rect. | 8 | 1 |
| 51 | 56.08 | humidity | 60 | 1440 | > th | dose independent | rect. | 24 | 9 |
| 55 | 56.18 | humidity | 60 | 1440 | < th | dose dependent | rect. | 8 | 1 |
| 68 | 56.19 | humidity | 60 | 1440 | < th | dose independent | rect. | 8 | 1 |
| 81 | 56.20 | humidity | 60 | 1440 | > th | dose independent | rect. | 5 | 4 |
| 98 | 56.28 | humidity | 60 | 270 | < th | dose dependent | rect. | 9 | 1 |
| 133 | 56.42 | humidity | 60 | 1440 | > th | dose independent | rect. | 20 | 13 |
| 135 | 56.48 | humidity | 60 | 270 | < th | dose independent | rect. | 8 | 2 |
| 214 | 56.55 | radiation | 10 | 10 | < th | dose dependent | rect. | 14 | 1 |
| 254 | 57.02 | wind | 1 | 10 | < th | dose dependent | rect. | 9 | 6 |
| 284 | 57.07 | radiation | 10 | 10 | < th | dose dependent | rect. | 11 | 4 |
| 300 | 57.19 | wind | 1 | 10 | < th | dose independent | rect. | 9 | 6 |
| 315 | 57.20 | radiation | 40 | 30 | > th | dose dependent | rect. | 13 | 21 |
| 338 | 57.30 | radiation | 40 | 30 | > th | dose dependent | sin | 12 | NA |
| 395 | 57.49 | radiation | 40 | 10 | > th | dose dependent | rect. | 9 | 1 |
| 452 | 57.57 | humidity | 60 | 90 | < th | dose independent | rect. | 17 | 17 |
| 483 | 57.64 | radiation | 40 | 10 | > th | dose independent | rect. | 9 | 1 |
| 565 | 57.73 | humidity | 60 | 10 | < th | dose independent | rect. | 9 | 1 |
| 627 | 57.73 | humidity | 60 | 10 | < th | dose dependent | rect. | 9 | 1 |
| 726 | 57.75 | wind | 1 | 10 | < th | dose dependent | rect. | 9 | 1 |
| 834 | 57.95 | radiation | 40 | 30 | > th | dose independent | sin | 12 | NA |
| 953 | 58.08 | wind | 1 | 10 | > th | dose independent | sin | 20 | NA |
| 968 | 58.16 | wind | 1 | 10 | < th | dose dependent | sin | 20 | NA |
| 986 | 58.19 | wind | 1 | 10 | < th | dose independent | sin | 20 | NA |