Os01g0119500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF1618 domain containing protein.
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Os01g0119500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF1618 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 32.22 | 0.267 | 10.7 | 0.438 | 1.21 | 0.415 | 0.248 | 1.08 | 0.14 | 13.9 | 18.99 | 2993 | -- | -- |
| 33.55 | 0.27 | 10.8 | 0.162 | 1.17 | 0.411 | 0.18 | -- | 0.0784 | 13.8 | 18.79 | 2986 | -- | -- |
| 32.45 | 0.265 | 10.7 | 0.444 | 1.21 | 0.419 | -- | 1.08 | 0.142 | 13.9 | 18.9 | 3028 | -- | -- |
| 33 | 0.268 | 10.7 | 0.159 | 1.22 | 0.425 | -- | -- | 0.138 | 13.8 | 25.92 | 5157 | -- | -- |
| 72.15 | 0.398 | 10.8 | 0.0982 | -- | 1.48 | -- | 0.737 | -0.078 | -- | 18.9 | 3028 | -- | -- |
| 38.75 | 0.292 | 10.7 | 0.318 | 1.18 | -- | 0.211 | -- | 0.155 | 13.8 | -- | -- | -- | -- |
| 38.93 | 0.292 | 10.7 | 0.325 | 1.18 | -- | -- | -- | 0.156 | 13.8 | -- | -- | -- | -- |
| 72.08 | 0.397 | 10.8 | -0.00924 | -- | 1.48 | -- | -- | -0.108 | -- | 20.22 | 11813 | -- | -- |
| 33.78 | 0.271 | 10.8 | -- | 1.21 | 0.467 | -- | -- | 0.122 | 13.7 | 25.59 | 5131 | -- | -- |
| 123.03 | 0.518 | 10.8 | 0.277 | -- | -- | -- | -- | 0.129 | -- | -- | -- | -- | -- |
| 41.71 | 0.302 | 10.8 | -- | 1.17 | -- | -- | -- | 0.12 | 13.8 | -- | -- | -- | -- |
| 72.08 | 0.397 | 10.8 | -- | -- | 1.48 | -- | -- | -0.107 | -- | 20.22 | 11813 | -- | -- |
| 125.04 | 0.522 | 10.8 | -- | -- | -- | -- | -- | 0.0984 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 30.33 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 13 | 7 |
| 5 | 30.76 | temperature | 25.0 | 90 | < th | dose independent | rect. | 13 | 8 |
| 8 | 30.98 | temperature | 25.0 | 90 | < th | dose independent | rect. | 15 | 6 |
| 20 | 31.32 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 7 | 17 |
| 21 | 31.33 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 12 | 10 |
| 28 | 31.41 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 4 | 1 |
| 42 | 31.52 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 4 | 1 |
| 45 | 31.54 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 46 | 31.54 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 48 | 31.56 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 7 | 1 |
| 49 | 31.56 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 52 | 31.59 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 23 | 4 |
| 60 | 31.66 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 7 | 1 |
| 84 | 31.71 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 7 | 19 |
| 86 | 31.71 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 13 | 22 |
| 135 | 31.83 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 3 | 23 |
| 155 | 31.88 | wind | 5.0 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 174 | 31.89 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 1 | 22 |
| 190 | 31.93 | wind | 5.0 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 192 | 31.93 | temperature | 25.0 | 720 | > th | dose independent | rect. | 7 | 12 |
| 199 | 31.93 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 19 | 8 |
| 205 | 31.94 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 13 | 20 |
| 216 | 31.97 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 8 | 12 |
| 218 | 31.97 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 7 | 23 |
| 231 | 31.99 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 7 | 22 |
| 236 | 32.01 | temperature | 25.0 | 720 | < th | dose independent | rect. | 7 | 13 |
| 244 | 32.03 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 19 | 1 |
| 273 | 32.05 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 13 | 5 |
| 281 | 32.05 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 6 | 14 |
| 308 | 32.08 | temperature | 25.0 | 720 | > th | dose independent | rect. | 7 | 8 |
| 323 | 32.10 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 4 | 2 |
| 324 | 32.10 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 15 | 2 |
| 331 | 32.10 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 12 | 22 |
| 383 | 32.16 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 10 |
| 398 | 32.17 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 15 | 18 |
| 399 | 32.17 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 15 | 20 |
| 407 | 32.18 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 2 | 20 |
| 421 | 32.19 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 13 | 18 |
| 432 | 32.20 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 1 | 19 |
| 434 | 32.21 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 20 | 2 |
| 476 | 32.24 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 19 | 6 |
| 485 | 32.25 | temperature | 25.0 | 270 | > th | dose independent | rect. | 7 | 16 |
| 486 | 32.25 | temperature | 20.0 | 4320 | > th | dose dependent | sin | 13 | NA |
| 514 | 32.27 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 11 |
| 530 | 32.28 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 19 | 1 |
| 557 | 32.30 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 12 |
| 586 | 32.31 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 5 | 14 |
| 604 | 32.32 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 7 | 12 |
| 613 | 32.33 | temperature | 30.0 | 720 | < th | dose dependent | sin | 23 | NA |
| 626 | 32.34 | wind | 5.0 | 43200 | < th | dose independent | rect. | 19 | 3 |
| 643 | 32.35 | wind | 5.0 | 43200 | > th | dose independent | rect. | 19 | 3 |
| 646 | 32.35 | temperature | 10.0 | 4320 | > th | dose dependent | sin | 14 | NA |
| 694 | 32.37 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 741 | 32.40 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 17 | 13 |
| 803 | 32.43 | atmosphere | 1000.0 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 804 | 32.43 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 4 | 1 |
| 809 | 32.43 | temperature | 30.0 | 4320 | < th | dose dependent | sin | 14 | NA |
| 833 | 32.44 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 885 | 32.46 | temperature | 25.0 | 720 | > th | dose independent | sin | 0 | NA |
| 936 | 32.47 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 998 | 32.50 | temperature | 20.0 | 720 | > th | dose dependent | sin | 23 | NA |