BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0139200 Os01g0139200|AK065080
(671 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0139200 Octicosapeptide/Phox/Bem1p domain containing p... 974 0.0
Os02g0809100 Octicosapeptide/Phox/Bem1p domain containing p... 101 2e-21
Os07g0438500 Octicosapeptide/Phox/Bem1p domain containing p... 100 5e-21
Os07g0556300 Octicosapeptide/Phox/Bem1p domain containing p... 100 6e-21
Os05g0427100 Octicosapeptide/Phox/Bem1p domain containing p... 99 1e-20
Os12g0594300 Octicosapeptide/Phox/Bem1p domain containing p... 97 3e-20
Os11g0444700 Octicosapeptide/Phox/Bem1p domain containing p... 91 3e-18
Os11g0444900 Octicosapeptide/Phox/Bem1p domain containing p... 90 4e-18
Os03g0691650 71 2e-12
Os02g0766800 68 2e-11
>Os01g0139200 Octicosapeptide/Phox/Bem1p domain containing protein
Length = 671
Score = 974 bits (2519), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 521/671 (77%), Positives = 521/671 (77%)
Query: 1 MDSVPXXXXXXXXXXXXXXYPESTESSPRSRGGDSWDEPFPSSXXXXXXXXXXXRLRLMC 60
MDSVP YPESTESSPRSRGGDSWDEPFPSS RLRLMC
Sbjct: 1 MDSVPAAGVGVGGGGAGAGYPESTESSPRSRGGDSWDEPFPSSAAAAAAAAGGGRLRLMC 60
Query: 61 SFGGRIVPRPTDKSLCYLGGETRIVAVERNASLADVHARLSRSLLGGQPFTLKYQLPNED 120
SFGGRIVPRPTDKSLCYLGGETRIVAVERNASLADVHARLSRSLLGGQPFTLKYQLPNED
Sbjct: 61 SFGGRIVPRPTDKSLCYLGGETRIVAVERNASLADVHARLSRSLLGGQPFTLKYQLPNED 120
Query: 121 LDSLISVSTDEDLDNLVDEYDXXXXXXXXXXXXXXXXXXLFLFPAKPXXXXXXXXXXXXX 180
LDSLISVSTDEDLDNLVDEYD LFLFPAKP
Sbjct: 121 LDSLISVSTDEDLDNLVDEYDRIAATSSGGGSSRTSRIRLFLFPAKPESSSSLGSLLDDS 180
Query: 181 XXXXXWFVDALNSAISGSLDGIPRGISTDSASVNCLLGLEDDSSTHSRGGPPNSSPAEEQ 240
WFVDALNSAISGSLDGIPRGISTDSASVNCLLGLEDDSSTHSRGGPPNSSPAEEQ
Sbjct: 181 SKSESWFVDALNSAISGSLDGIPRGISTDSASVNCLLGLEDDSSTHSRGGPPNSSPAEEQ 240
Query: 241 RANQQKLXXXXXXXXXRHPHDVQSVPDSPMIDKNSSFGSTSSAPSLSNLPPIRVRPEDRP 300
RANQQKL RHPHDVQSVPDSPMIDKNSSFGSTSSAPSLSNLPPIRVRPEDRP
Sbjct: 241 RANQQKLAAAAAVAAARHPHDVQSVPDSPMIDKNSSFGSTSSAPSLSNLPPIRVRPEDRP 300
Query: 301 PDSRLAPQVPVEDHFAQMGISDQPVQPVIGGYMQPPPQVPIPNMAVPSISPSDASSRVFS 360
PDSRLAPQVPVEDHFAQMGISDQPVQPVIGGYMQPPPQVPIPNMAVPSISPSDASSRVFS
Sbjct: 301 PDSRLAPQVPVEDHFAQMGISDQPVQPVIGGYMQPPPQVPIPNMAVPSISPSDASSRVFS 360
Query: 361 DDDKSDHXXXXXRXXXXXXXXXXXXXXXTNRAMYYNDRSPPAELKRDMPVGTDAASYRVP 420
DDDKSDH R TNRAMYYNDRSPPAELKRDMPVGTDAASYRVP
Sbjct: 361 DDDKSDHGGGGGRKPQPPKPEVPPVADPTNRAMYYNDRSPPAELKRDMPVGTDAASYRVP 420
Query: 421 VXXXXXXXXXXXXXXXXXXXXXGYVYAQMHAXXXXXXXXXXXXXXXXXXXYVTAQNQHFI 480
V GYVYAQMHA YVTAQNQHFI
Sbjct: 421 VPAQDAAAAAAAAAAAAQQPPAGYVYAQMHAPPPQQQPPPPQQQQPVPQQYVTAQNQHFI 480
Query: 481 HNPATGTFIPIQSYYHHXXXXXXXXXXXXXXXXXXXXSHAFDPNTGMYYIPMRTNAPQAY 540
HNPATGTFIPIQSYYHH SHAFDPNTGMYYIPMRTNAPQAY
Sbjct: 481 HNPATGTFIPIQSYYHHPVPQQAPQPPMPQPVPQPQQSHAFDPNTGMYYIPMRTNAPQAY 540
Query: 541 SMPPGAAAVPPPTLVDTTPKPTVPIPQMAVKQPELQQPGLYRTTAAPTPVPASNAPAYAG 600
SMPPGAAAVPPPTLVDTTPKPTVPIPQMAVKQPELQQPGLYRTTAAPTPVPASNAPAYAG
Sbjct: 541 SMPPGAAAVPPPTLVDTTPKPTVPIPQMAVKQPELQQPGLYRTTAAPTPVPASNAPAYAG 600
Query: 601 MGYHHVIQTHHHPAPQPAATVAGNFGYDYGDPTRAQVFYSQAAAPPTLPPQYQPMGSPDA 660
MGYHHVIQTHHHPAPQPAATVAGNFGYDYGDPTRAQVFYSQAAAPPTLPPQYQPMGSPDA
Sbjct: 601 MGYHHVIQTHHHPAPQPAATVAGNFGYDYGDPTRAQVFYSQAAAPPTLPPQYQPMGSPDA 660
Query: 661 GQADLKQARAS 671
GQADLKQARAS
Sbjct: 661 GQADLKQARAS 671
>Os02g0809100 Octicosapeptide/Phox/Bem1p domain containing protein
Length = 507
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/89 (56%), Positives = 65/89 (73%), Gaps = 4/89 (4%)
Query: 55 RLRLMCSFGGRIVPRPTDKSLCYLGGETRIVAVERNASLADVHARLSRSLLGGQP--FTL 112
++RLM S+GGRI PRP D L Y+ GET+I+++ER AD ARL+ L G P F +
Sbjct: 40 KVRLMVSYGGRIQPRPHDHQLSYVNGETKILSLERPLRFADFAARLAG--LAGSPGDFCV 97
Query: 113 KYQLPNEDLDSLISVSTDEDLDNLVDEYD 141
KYQLP EDLD+L+SV+ DEDL++LV EYD
Sbjct: 98 KYQLPGEDLDALVSVTNDEDLEHLVLEYD 126
>Os07g0438500 Octicosapeptide/Phox/Bem1p domain containing protein
Length = 862
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 43/85 (50%), Positives = 63/85 (74%), Gaps = 2/85 (2%)
Query: 55 RLRLMCSFGGRIVPRPTDKSLCYLGGETRIVAVERNASLADVHARLSRSLLGGQPFTLKY 114
R++++CSFGG+I+PRP+D L Y+GGET I+ + RN S ++ + + + QP +KY
Sbjct: 165 RIKILCSFGGKILPRPSDGKLRYVGGETHIIRISRNISWQELKQKT--TAIYNQPHVIKY 222
Query: 115 QLPNEDLDSLISVSTDEDLDNLVDE 139
QLP EDLD+LISVS DEDL N+++E
Sbjct: 223 QLPGEDLDALISVSNDEDLRNMMEE 247
>Os07g0556300 Octicosapeptide/Phox/Bem1p domain containing protein
Length = 423
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 96/189 (50%), Gaps = 20/189 (10%)
Query: 56 LRLMCSFGGRIVPRPTDKSLCYLGGETRIVAVERNASLADVHARLSRSL-----LGGQPF 110
+RLMCSFGGRI+PRP D L Y+GGETRIV+V R A+ + A L++ GG
Sbjct: 94 VRLMCSFGGRILPRPGDHQLRYVGGETRIVSVPRAATFDALVAALAKVAPALFPAGGPSP 153
Query: 111 TLKYQLPNEDLDSLISVSTDEDLDNLVDEYDXXXXXXXXXXXXXXXXXXLFLFPAKPXXX 170
L+YQLP +DLD+LIS+++D+D+DNL++E D LFLF + P
Sbjct: 154 ALRYQLPQDDLDALISITSDDDVDNLIEEID--RFQGLAAASIKPPRLRLFLFASSPADH 211
Query: 171 XXXXXXXXXXXXXX------XWFVDALNSAISGSLDGIPRGISTDSASV----NCLLGLE 220
WFVDALN+ ++ RG S S+ + + L GL+
Sbjct: 212 ASAAAFGSVLSGAGGDSSSDQWFVDALNAPAPAPIE---RGRSEASSIISEVPDYLFGLD 268
Query: 221 DDSSTHSRG 229
S S G
Sbjct: 269 TTSDEPSPG 277
>Os05g0427100 Octicosapeptide/Phox/Bem1p domain containing protein
Length = 366
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 65/87 (74%), Gaps = 1/87 (1%)
Query: 55 RLRLMCSFGGRIVPRPTDKSLCYLGGETRIVAVERNASLADVHARLSRSLLGGQPFTLKY 114
R++++CSFGGRI+PRP+D +L Y+GGETR++AV R+ +D+ ++ + + +KY
Sbjct: 42 RIKILCSFGGRIMPRPSDGALKYIGGETRVLAVPRSIPFSDLKKKV-EEMFRTEVAAIKY 100
Query: 115 QLPNEDLDSLISVSTDEDLDNLVDEYD 141
QL EDLD L+SV+ DEDL +++DEYD
Sbjct: 101 QLVAEDLDVLVSVTCDEDLTHMLDEYD 127
>Os12g0594300 Octicosapeptide/Phox/Bem1p domain containing protein
Length = 1133
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 64/86 (74%), Gaps = 2/86 (2%)
Query: 55 RLRLMCSFGGRIVPRPTDKSLCYLGGETRIVAVERNASLADVHARLSRSLLGGQPFTLKY 114
+ + MCSFGG+I+PRP+D L Y+GGETR++++ RN S ++ + + + QP +KY
Sbjct: 115 KAKFMCSFGGKIMPRPSDGKLRYVGGETRLISIPRNFSWNELVQKTLK--IYSQPHIIKY 172
Query: 115 QLPNEDLDSLISVSTDEDLDNLVDEY 140
QLP EDLD+LIS+S DEDL N+++EY
Sbjct: 173 QLPEEDLDALISLSCDEDLQNMMEEY 198
>Os11g0444700 Octicosapeptide/Phox/Bem1p domain containing protein
Length = 224
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 63/86 (73%), Gaps = 1/86 (1%)
Query: 56 LRLMCSFGGRIVPRPTDKSLCYLGGETRIVAVERNASLADVHARLSRSLLGGQPFTLKYQ 115
++ +CS+GGRI+PR D +L Y+GG+ R+V+V+R+ ++ +L R + G + L+ Q
Sbjct: 40 VKFLCSYGGRILPRHADGALRYVGGDNRVVSVDRSLPFHELQRKL-REMCGWEAVCLRCQ 98
Query: 116 LPNEDLDSLISVSTDEDLDNLVDEYD 141
LP EDLD+L+SV+ D+DL NL++EYD
Sbjct: 99 LPTEDLDALVSVNGDDDLANLLEEYD 124
>Os11g0444900 Octicosapeptide/Phox/Bem1p domain containing protein
Length = 108
Score = 90.1 bits (222), Expect = 4e-18, Method: Composition-based stats.
Identities = 39/86 (45%), Positives = 63/86 (73%), Gaps = 1/86 (1%)
Query: 56 LRLMCSFGGRIVPRPTDKSLCYLGGETRIVAVERNASLADVHARLSRSLLGGQPFTLKYQ 115
++ +CS+GGRI+PR D +L Y+GG+ R+V+V+R+ ++ +L R + G + L+ Q
Sbjct: 22 VKFLCSYGGRILPRHADGALRYVGGDNRVVSVDRSLPFHELQRKL-REMCGWEAVCLRCQ 80
Query: 116 LPNEDLDSLISVSTDEDLDNLVDEYD 141
LP EDLD+L+SV+ D+DL NL++EYD
Sbjct: 81 LPTEDLDALVSVTGDDDLANLLEEYD 106
>Os03g0691650
Length = 250
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 60/90 (66%), Gaps = 4/90 (4%)
Query: 56 LRLMCSFGGRIVPRPTDKSLCYLGGETRIVAVERNASLADVHARLS-RSLLGGQPFT-LK 113
+RL+CS GGR+VP L Y+GGETR +AV R A ++ ARL+ ++ GG T ++
Sbjct: 1 MRLLCSHGGRLVPCGPGGGLRYVGGETRALAVPRGAPFRELTARLAEKAGAGGDAVTAVR 60
Query: 114 YQLPNEDLDS--LISVSTDEDLDNLVDEYD 141
Y+L + LD L+SV++DE+L ++ DEYD
Sbjct: 61 YRLADGGLDEDLLVSVTSDEELAHMRDEYD 90
>Os02g0766800
Length = 200
Score = 68.2 bits (165), Expect = 2e-11, Method: Composition-based stats.
Identities = 38/87 (43%), Positives = 59/87 (67%), Gaps = 3/87 (3%)
Query: 55 RLRLMCSFGGRIVPRPTDKSLCYLGGETRIVAVERNASLADVHARLSRSLLGGQPFTLKY 114
R++++CSFGGRI+P P+D +L Y+ ETRI+AV R+ + A L + + + F +
Sbjct: 47 RIKILCSFGGRIMPCPSDDALKYIDSETRILAVPRSIPFSP-RADLKKKV--EEMFRTEV 103
Query: 115 QLPNEDLDSLISVSTDEDLDNLVDEYD 141
+ EDLD L+SV+ DEDL +++DEYD
Sbjct: 104 AVVAEDLDVLVSVTWDEDLTHMLDEYD 130
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.314 0.131 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 22,661,687
Number of extensions: 1094240
Number of successful extensions: 5583
Number of sequences better than 1.0e-10: 10
Number of HSP's gapped: 5565
Number of HSP's successfully gapped: 10
Length of query: 671
Length of database: 17,035,801
Length adjustment: 107
Effective length of query: 564
Effective length of database: 11,448,903
Effective search space: 6457181292
Effective search space used: 6457181292
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 159 (65.9 bits)