BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0100800 Os01g0100800|AK122012
(356 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0100800 Protein of unknown function DUF1664 family pro... 664 0.0
Os05g0103700 Protein of unknown function DUF1664 family pro... 285 4e-77
Os09g0482740 Protein of unknown function DUF1664 family pro... 117 1e-26
Os05g0182700 Protein of unknown function DUF1664 family pro... 94 1e-19
Os01g0112300 Protein of unknown function DUF1664 family pro... 91 2e-18
Os01g0185100 87 2e-17
>Os01g0100800 Protein of unknown function DUF1664 family protein
Length = 356
Score = 664 bits (1712), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/340 (95%), Positives = 325/340 (95%)
Query: 17 TLLTSGEAKIALPDFRDVLSGAFKFVTKQDKKDGPSTSSPHAAHLLSQVNHLREDLQLLS 76
TLLTSGEAKIALPDFRDVLSGAFKFVTKQDKKDGPSTSSPHAAHLLSQVNHLREDLQLLS
Sbjct: 17 TLLTSGEAKIALPDFRDVLSGAFKFVTKQDKKDGPSTSSPHAAHLLSQVNHLREDLQLLS 76
Query: 77 RSNQVAIVTVDGRPGPGAYGITAVVAGAIGYLYIRWKGWKLSDLMFVTKRGLSDACDVVG 136
RSNQVAIVTVDGRPGPGAYGITAVVAGAIGYLYIRWKGWKLSDLMFVTKRGLSDACDVVG
Sbjct: 77 RSNQVAIVTVDGRPGPGAYGITAVVAGAIGYLYIRWKGWKLSDLMFVTKRGLSDACDVVG 136
Query: 137 KQLEHVSENVNAAKRHLAGRIDHVDCTLDECQEITESTRKEVTVIHEDISAFQEEMQSVH 196
KQLEHVSENVNAAKRHLAGRIDHVDCTLDECQEITESTRKEVTVIHEDISAFQEEMQSVH
Sbjct: 137 KQLEHVSENVNAAKRHLAGRIDHVDCTLDECQEITESTRKEVTVIHEDISAFQEEMQSVH 196
Query: 197 LVVRTLETKLGRLSYTQDRTARGIYDLCEFTKRLDKSPKTDTRQVLSSTPLPAIELPERI 256
LVVRTLETKLGRLSYTQDRTARGIYDLCEFTKRLDKSPKTDTRQVLSSTPLPAIELPERI
Sbjct: 197 LVVRTLETKLGRLSYTQDRTARGIYDLCEFTKRLDKSPKTDTRQVLSSTPLPAIELPERI 256
Query: 257 TRAASLPPSSEPEFSGPRSPVTEASKVVHSPTTMSASGLSMLVETSMPPKRGVLSRASSM 316
TRAASLPPSSEPEFSGPRSPVTEASKVVHSPTTMSASGLSMLVETSMPPKRGVLSRASSM
Sbjct: 257 TRAASLPPSSEPEFSGPRSPVTEASKVVHSPTTMSASGLSMLVETSMPPKRGVLSRASSM 316
Query: 317 KXXXXXXXXXXXXXXXPTTGRNVPNSRLFGGFGFLKSSAS 356
K PTTGRNVPNSRLFGGFGFLKSSAS
Sbjct: 317 KEGSQELSNGSSSSGEPTTGRNVPNSRLFGGFGFLKSSAS 356
>Os05g0103700 Protein of unknown function DUF1664 family protein
Length = 366
Score = 285 bits (729), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 180/367 (49%), Positives = 223/367 (60%), Gaps = 44/367 (11%)
Query: 17 TLLTSGEAKIALPDFRDVLSGAFKFVTK--QDKKDGPSTSSPHAAHLLSQVNHLREDLQL 74
++L G+AK LP +VLSGA KFV K + KD S + H A LLSQVNHLR+++Q
Sbjct: 17 SVLVGGDAK--LPSAGEVLSGAAKFVKKHGNEGKDTSSNTDTHTAQLLSQVNHLRQEIQS 74
Query: 75 LSRSNQVAIVTVDGRPGPGAYGITAVV-AGAIGYLYIRWKGWKLSDLMFVTKRGLSDACD 133
L S V +VT R GPG + ITAVV AGA+GY YI+WKGWKLSDLMFVTKRGLSDAC+
Sbjct: 75 LG-SRPVTVVTNAARSGPGTFTITAVVVAGAVGYAYIKWKGWKLSDLMFVTKRGLSDACN 133
Query: 134 VVGKQLEHVSENVNAAKRHLAGRIDHVDCTLDECQEITESTRKEVTVIHEDISAFQEEMQ 193
VVG QL+ VS++V +A++HLAGRID VD +LDE QEI E TR EVTVIH D+SAFQE++Q
Sbjct: 134 VVGSQLDKVSDDVTSARKHLAGRIDRVDISLDETQEIIEGTRDEVTVIHGDLSAFQEDLQ 193
Query: 194 SVHLVVRTLETKLGRLSYTQDRTARGIYDLCEFTKRLDKSPKTDTRQVLSSTPLPAIELP 253
SV+LVVR+LE+KL L YTQD TA GI DL EFT+ K RQV +++ PAI
Sbjct: 194 SVNLVVRSLESKLVSLEYTQDHTANGISDLVEFTQ------KATIRQVPAASVPPAIGSS 247
Query: 254 ERIT-RAASLP------------PSSEPEFSGPRSPV-TEASKVVHSPTTMSASGLSMLV 299
ER+ R +SLP P++EP PR+ V E S + S GL L
Sbjct: 248 ERVVRRVSSLPQSTALPALPTTAPAAEPS---PRAEVPQEEQWGFVSKASSSREGLGRLQ 304
Query: 300 ETSMPPKRGVLSRASSMKXXXXXXXXXXXXXXXPTTGRNVPNSRL-----FG-----GFG 349
+ +R V++R SSM+ +TGRN FG G G
Sbjct: 305 Q-----QRSVVTRTSSMREGSPESSNGASSSTGASTGRNTSTGTNTSTGRFGGLRLPGLG 359
Query: 350 FLKSSAS 356
FL SS S
Sbjct: 360 FLASSTS 366
>Os09g0482740 Protein of unknown function DUF1664 family protein
Length = 318
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 118/211 (55%), Gaps = 11/211 (5%)
Query: 18 LLTSGEAKIALPDFRDVLSGAFKFVTKQDKKDGPSTSSPHAAHLLSQVNHLREDLQLLSR 77
+L +G L + ++++ G G +S+ A L SQ+ +L ++++ L+
Sbjct: 25 VLRNGRLSDVLAELQELMKGV---------NQGEGSSAYDIALLQSQIRNLAQEVRDLTI 75
Query: 78 SNQVAIVTVDGRPGPG--AYGITAVVAGAIGYLYIRWKGWKLSDLMFVTKRGLSDACDVV 135
S + I++ + G +Y + A GA+GY Y+ WKG LSD+MFVTKR ++ A + +
Sbjct: 76 SRPITILSGNSDSGGSLSSYILPAAAVGAMGYCYMWWKGLSLSDVMFVTKRNMTKAVESM 135
Query: 136 GKQLEHVSENVNAAKRHLAGRIDHVDCTLDECQEITESTRKEVTVIHEDISAFQEEMQSV 195
KQL+ VS + A KRHL+ R++++D +DE E+++ R EV + +D+S ++ ++
Sbjct: 136 SKQLDQVSSALAATKRHLSQRLENLDGKMDEQVEVSKIIRNEVNDVKDDLSQIGFDIAAI 195
Query: 196 HLVVRTLETKLGRLSYTQDRTARGIYDLCEF 226
+V LE K+ L QD T G++ LC+
Sbjct: 196 QQMVAGLEGKIELLDNKQDATNAGVWYLCQI 226
>Os05g0182700 Protein of unknown function DUF1664 family protein
Length = 286
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 100/174 (57%), Gaps = 8/174 (4%)
Query: 61 LLSQVNHLREDLQLLSRSNQVAIVTVDGRPGPGAYGITAVVA-----GAIGYLYIRWKGW 115
L QV +L +++ L+ S++ +I ++G G G G++ ++ GA+GY Y+ WKG
Sbjct: 64 LTRQVRNLAMEVKQLA-SSRGSITVLNG--GSGQTGVSGLIVPAATVGALGYGYMWWKGI 120
Query: 116 KLSDLMFVTKRGLSDACDVVGKQLEHVSENVNAAKRHLAGRIDHVDCTLDECQEITESTR 175
+DLM+VTKR +++A + K LE V ++ AAKRHL RI+ +D LD+ + ++ R
Sbjct: 121 SFADLMYVTKRNMANAVSSMTKHLEQVQTSLAAAKRHLTQRIERLDDKLDQQKALSGQIR 180
Query: 176 KEVTVIHEDISAFQEEMQSVHLVVRTLETKLGRLSYTQDRTARGIYDLCEFTKR 229
+VT + E++++ +V L+ K+ + Q+ + G+ LC+F ++
Sbjct: 181 DDVTDARLKLENIGSEIKNIKQLVWGLDEKMDSMEAKQNFSCAGVMYLCQFIEQ 234
>Os01g0112300 Protein of unknown function DUF1664 family protein
Length = 245
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/100 (52%), Positives = 65/100 (65%), Gaps = 6/100 (6%)
Query: 17 TLLTSGEAKIALPDFRDVLSGAFKFVTK--QDKKDGPSTSSPHAAHLLSQVNHLREDLQL 74
++L G+AK LP +VLSGA KFV K + KD S + H A LLSQVNHLR+++Q
Sbjct: 17 SVLVGGDAK--LPSAGEVLSGAAKFVKKHGNEGKDTSSNTDAHTAQLLSQVNHLRQEIQS 74
Query: 75 LSRSNQVAIVTVDGRPGPGAYGITAV-VAGAIGYLYIRWK 113
L S V +VT R GPG + IT V VAGA+GY YI+WK
Sbjct: 75 LG-SRPVTVVTNAARSGPGTFTITVVAVAGAVGYAYIKWK 113
>Os01g0185100
Length = 286
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 70/123 (56%)
Query: 107 YLYIRWKGWKLSDLMFVTKRGLSDACDVVGKQLEHVSENVNAAKRHLAGRIDHVDCTLDE 166
Y Y+RWKG ++ LM+VTK+ +++A + K LE V ++ AAKRHL RI H+D LD+
Sbjct: 105 YGYMRWKGISIASLMYVTKQNMANAVASMTKHLEQVQSSLAAAKRHLTQRIQHLDDKLDQ 164
Query: 167 CQEITESTRKEVTVIHEDISAFQEEMQSVHLVVRTLETKLGRLSYTQDRTARGIYDLCEF 226
++I+ ++EVT + EMQ + V L KL + Q+ + G+ L EF
Sbjct: 165 QKQISGQIKEEVTGARLKLQDIGSEMQKIKQVAHGLGGKLDSIEAKQNYSLAGVMYLVEF 224
Query: 227 TKR 229
++
Sbjct: 225 IEQ 227
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.315 0.130 0.371
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 10,753,804
Number of extensions: 431103
Number of successful extensions: 1709
Number of sequences better than 1.0e-10: 6
Number of HSP's gapped: 1700
Number of HSP's successfully gapped: 6
Length of query: 356
Length of database: 17,035,801
Length adjustment: 102
Effective length of query: 254
Effective length of database: 11,709,973
Effective search space: 2974333142
Effective search space used: 2974333142
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 156 (64.7 bits)