Os05g0182700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF1664 family protein.
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Os05g0182700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF1664 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 8.02 | 0.133 | 13.4 | -0.434 | 0.397 | 0.245 | 0.0466 | 0.867 | -0.0501 | 1.01 | 81.04 | 4580 | -- | -- |
| 8.82 | 0.138 | 13.4 | -0.448 | 0.389 | 0.31 | 0.0219 | -- | -0.0758 | 1.18 | 81.42 | 6409 | -- | -- |
| 8.03 | 0.132 | 13.4 | -0.439 | 0.397 | 0.246 | -- | 0.842 | -0.0495 | 1.03 | 80.43 | 4610 | -- | -- |
| 8.81 | 0.138 | 13.4 | -0.447 | 0.389 | 0.314 | -- | -- | -0.0663 | 1.2 | 80 | 6406 | -- | -- |
| 16.4 | 0.19 | 13.4 | -0.439 | -- | -0.362 | -- | 0.572 | -0.0486 | -- | 80.43 | 4610 | -- | -- |
| 10.13 | 0.149 | 13.4 | -0.463 | 0.393 | -- | 0.0386 | -- | -0.0379 | 0.909 | -- | -- | -- | -- |
| 10.14 | 0.149 | 13.4 | -0.464 | 0.393 | -- | -- | -- | -0.0381 | 0.91 | -- | -- | -- | -- |
| 15.94 | 0.187 | 13.4 | -0.455 | -- | -0.372 | -- | -- | -0.0285 | -- | 95 | 2461 | -- | -- |
| 11.42 | 0.157 | 13.4 | -- | 0.4 | 0.42 | -- | -- | 0.0382 | 0.612 | 66 | 44711 | -- | -- |
| 19.74 | 0.208 | 13.4 | -0.45 | -- | -- | -- | -- | -0.0307 | -- | -- | -- | -- | -- |
| 15.82 | 0.186 | 13.4 | -- | 0.385 | -- | -- | -- | 0.0136 | 0.858 | -- | -- | -- | -- |
| 20.03 | 0.208 | 13.4 | -- | -- | 0.509 | -- | -- | 0.0414 | -- | 67.02 | 28389 | -- | -- |
| 25.08 | 0.234 | 13.4 | -- | -- | -- | -- | -- | 0.0192 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 7.73 | humidity | 50.0 | 4320 | > th | dose dependent | rect. | 9 | 1 |
| 6 | 7.76 | humidity | 90.0 | 4320 | < th | dose dependent | rect. | 10 | 1 |
| 26 | 7.84 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 7 | 3 |
| 29 | 7.85 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 7 | 6 |
| 36 | 7.86 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 5 | 8 |
| 52 | 7.87 | humidity | 90.0 | 4320 | < th | dose dependent | rect. | 5 | 6 |
| 68 | 7.88 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 23 | 13 |
| 73 | 7.89 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 7 | 6 |
| 108 | 7.89 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 7 | 7 |
| 110 | 7.89 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 1 | 11 |
| 128 | 7.91 | humidity | 70.0 | 4320 | < th | dose independent | sin | 7 | NA |
| 130 | 7.91 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 14 | 3 |
| 131 | 7.91 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 14 | 3 |
| 136 | 7.91 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 14 | 3 |
| 146 | 7.92 | humidity | 70.0 | 4320 | > th | dose independent | sin | 7 | NA |
| 155 | 7.92 | humidity | 80.0 | 4320 | < th | dose dependent | sin | 7 | NA |
| 196 | 7.93 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 14 | 3 |
| 251 | 7.95 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 253 | 7.95 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 5 |
| 285 | 7.96 | wind | 3.0 | 14400 | > th | dose independent | rect. | 24 | 5 |
| 325 | 7.97 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 24 | 6 |
| 353 | 7.98 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 24 | 4 |
| 423 | 7.99 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 24 | 6 |
| 452 | 8.00 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 24 | 9 |
| 479 | 8.01 | wind | 3.0 | 14400 | > th | dose independent | rect. | 20 | 10 |
| 492 | 8.01 | wind | 7.0 | 14400 | < th | dose dependent | rect. | 24 | 8 |
| 519 | 8.02 | wind | 3.0 | 14400 | < th | dose independent | rect. | 20 | 10 |
| 650 | 8.04 | humidity | 50.0 | 4320 | > th | dose dependent | sin | 2 | NA |
| 653 | 8.04 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 24 | 4 |
| 770 | 8.06 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 15 | 22 |
| 771 | 8.06 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 24 | 2 |
| 784 | 8.06 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 20 | 10 |
| 832 | 8.07 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 15 | 22 |
| 837 | 8.07 | humidity | 80.0 | 4320 | < th | dose dependent | no | NA | NA |
| 879 | 8.07 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 7 | 21 |
| 881 | 8.07 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 2 | 22 |
| 951 | 8.08 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 6 | 18 |
| 982 | 8.09 | wind | 1.0 | 4320 | > th | dose independent | rect. | 17 | 3 |