Os01g0112300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF1664 family protein.
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Os01g0112300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF1664 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 18.8 | 0.204 | 10 | 0.455 | 0.356 | 0.505 | -0.181 | 0.177 | 0.176 | 0.498 | 72.01 | 1241 | -- | -- |
| 18.86 | 0.202 | 10 | 0.481 | 0.356 | 0.514 | -0.21 | -- | 0.183 | 0.509 | 72.5 | 1239 | -- | -- |
| 18.93 | 0.203 | 10 | 0.452 | 0.355 | 0.505 | -- | 0.239 | 0.175 | 0.474 | 72.05 | 1244 | -- | -- |
| 19.05 | 0.203 | 10 | 0.491 | 0.354 | 0.516 | -- | -- | 0.184 | 0.477 | 72.73 | 1244 | -- | -- |
| 22.61 | 0.221 | 10 | 0.46 | -- | 0.556 | -- | 0.128 | 0.164 | -- | 73.82 | 1543 | -- | -- |
| 27.8 | 0.247 | 10 | 0.378 | 0.242 | -- | -0.288 | -- | 0.118 | 0.317 | -- | -- | -- | -- |
| 28.15 | 0.248 | 10 | 0.39 | 0.243 | -- | -- | -- | 0.119 | 0.202 | -- | -- | -- | -- |
| 22.57 | 0.221 | 10 | 0.482 | -- | 0.538 | -- | -- | 0.185 | -- | 73.94 | 1551 | -- | -- |
| 25.23 | 0.234 | 10 | -- | 0.341 | 0.487 | -- | -- | 0.127 | 0.546 | 74 | 1266 | -- | -- |
| 31.88 | 0.264 | 10 | 0.398 | -- | -- | -- | -- | 0.123 | -- | -- | -- | -- | -- |
| 32.16 | 0.265 | 10 | -- | 0.249 | -- | -- | -- | 0.0757 | 0.287 | -- | -- | -- | -- |
| 28.35 | 0.248 | 10 | -- | -- | 0.489 | -- | -- | 0.128 | -- | 74.44 | 1596 | -- | -- |
| 36.05 | 0.28 | 10 | -- | -- | -- | -- | -- | 0.0786 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 19.57 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 14 |
| 5 | 19.70 | humidity | 80 | 1440 | > th | dose independent | rect. | 7 | 14 |
| 12 | 19.76 | humidity | 70 | 1440 | > th | dose independent | rect. | 14 | 20 |
| 13 | 19.76 | humidity | 60 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 14 | 19.76 | humidity | 60 | 1440 | > th | dose dependent | rect. | 8 | 14 |
| 17 | 19.78 | humidity | 70 | 1440 | > th | dose independent | rect. | 15 | 22 |
| 28 | 19.81 | humidity | 70 | 1440 | > th | dose independent | sin | 17 | NA |
| 69 | 19.88 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 23 |
| 86 | 19.90 | humidity | 90 | 1440 | < th | dose dependent | rect. | 7 | 15 |
| 104 | 19.92 | humidity | 70 | 1440 | > th | dose independent | rect. | 9 | 11 |
| 159 | 19.94 | humidity | 70 | 1440 | > th | dose independent | rect. | 15 | 4 |
| 169 | 19.95 | humidity | 60 | 1440 | > th | dose dependent | sin | 22 | NA |
| 184 | 19.96 | humidity | 80 | 1440 | < th | dose independent | sin | 0 | NA |
| 185 | 19.96 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 8 |
| 195 | 19.96 | humidity | 50 | 1440 | > th | dose dependent | sin | 20 | NA |
| 199 | 19.97 | humidity | 70 | 1440 | > th | dose independent | no | NA | NA |
| 215 | 19.97 | humidity | 70 | 1440 | > th | dose independent | rect. | 1 | 19 |
| 232 | 19.97 | humidity | 70 | 1440 | > th | dose independent | rect. | 23 | 21 |
| 286 | 19.99 | humidity | 70 | 1440 | > th | dose independent | rect. | 15 | 7 |
| 324 | 20.00 | humidity | 90 | 1440 | < th | dose dependent | rect. | 15 | 23 |
| 373 | 20.03 | humidity | 90 | 1440 | < th | dose dependent | sin | 20 | NA |
| 448 | 20.06 | humidity | 90 | 1440 | < th | dose dependent | no | NA | NA |
| 456 | 20.06 | humidity | 80 | 1440 | < th | dose dependent | rect. | 11 | 22 |
| 494 | 20.09 | humidity | 80 | 1440 | < th | dose dependent | sin | 16 | NA |
| 556 | 20.12 | humidity | 80 | 1440 | > th | dose independent | sin | 0 | NA |
| 564 | 20.12 | humidity | 80 | 1440 | < th | dose dependent | rect. | 15 | 19 |
| 651 | 20.17 | humidity | 70 | 1440 | < th | dose independent | rect. | 15 | 22 |
| 683 | 20.17 | humidity | 50 | 1440 | > th | dose dependent | rect. | 15 | 23 |
| 688 | 20.18 | humidity | 50 | 1440 | > th | dose dependent | no | NA | NA |
| 763 | 20.20 | humidity | 70 | 1440 | < th | dose independent | sin | 17 | NA |
| 807 | 20.22 | humidity | 70 | 1440 | < th | dose independent | rect. | 14 | 20 |
| 892 | 20.26 | humidity | 80 | 1440 | > th | dose independent | rect. | 7 | 8 |
| 910 | 20.26 | humidity | 60 | 14400 | < th | dose dependent | rect. | 16 | 1 |
| 938 | 20.28 | humidity | 70 | 1440 | < th | dose independent | rect. | 15 | 4 |