Os01g0100800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF1664 family protein.
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Os01g0100800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF1664 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 13.62 | 0.173 | 10.2 | -0.136 | 0.117 | 0.45 | -0.0829 | -0.058 | 0.207 | 9.94 | 21.6 | 1523 | -- | -- |
| 13.63 | 0.172 | 10.2 | -0.121 | 0.116 | 0.453 | -0.079 | -- | 0.21 | 9.93 | 21.6 | 1521 | -- | -- |
| 13.64 | 0.172 | 10.2 | -0.139 | 0.118 | 0.449 | -- | -0.0573 | 0.207 | 9.83 | 21.57 | 1524 | -- | -- |
| 13.65 | 0.172 | 10.2 | -0.124 | 0.118 | 0.453 | -- | -- | 0.21 | 9.83 | 21.6 | 1523 | -- | -- |
| 14.47 | 0.177 | 10.2 | -0.138 | -- | 0.448 | -- | -0.0485 | 0.207 | -- | 21.5 | 1530 | -- | -- |
| 19.7 | 0.208 | 10.2 | 0.0688 | 0.115 | -- | -0.0626 | -- | 0.342 | 9.62 | -- | -- | -- | -- |
| 19.72 | 0.208 | 10.2 | 0.0664 | 0.115 | -- | -- | -- | 0.342 | 9.56 | -- | -- | -- | -- |
| 14.48 | 0.177 | 10.2 | -0.125 | -- | 0.451 | -- | -- | 0.21 | -- | 21.51 | 1530 | -- | -- |
| 13.97 | 0.174 | 10.2 | -- | 0.118 | 0.403 | -- | -- | 0.231 | 9.98 | 21.71 | 1485 | -- | -- |
| 20.5 | 0.212 | 10.2 | 0.0655 | -- | -- | -- | -- | 0.342 | -- | -- | -- | -- | -- |
| 19.83 | 0.208 | 10.2 | -- | 0.115 | -- | -- | -- | 0.334 | 9.52 | -- | -- | -- | -- |
| 14.81 | 0.179 | 10.2 | -- | -- | 0.401 | -- | -- | 0.231 | -- | 21.7 | 1520 | -- | -- |
| 20.62 | 0.212 | 10.2 | -- | -- | -- | -- | -- | 0.335 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 13.49 | wind | 1 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 2 | 13.85 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 3 | 13.87 | temperature | 25 | 1440 | < th | dose dependent | rect. | 10 | 17 |
| 13 | 13.92 | temperature | 25 | 1440 | < th | dose dependent | sin | 17 | NA |
| 20 | 13.93 | temperature | 25 | 1440 | < th | dose dependent | rect. | 13 | 14 |
| 41 | 13.98 | wind | 9 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 56 | 14.00 | temperature | 25 | 1440 | < th | dose dependent | rect. | 15 | 8 |
| 119 | 14.10 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 22 |
| 122 | 14.11 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 127 | 14.11 | temperature | 25 | 1440 | < th | dose dependent | rect. | 19 | 23 |
| 141 | 14.12 | temperature | 25 | 1440 | < th | dose dependent | rect. | 13 | 23 |
| 281 | 14.29 | wind | 3 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 331 | 14.37 | wind | 1 | 43200 | > th | dose independent | rect. | 4 | 4 |
| 336 | 14.37 | temperature | 25 | 270 | < th | dose dependent | rect. | 3 | 22 |
| 344 | 14.38 | temperature | 25 | 270 | < th | dose dependent | rect. | 6 | 23 |
| 405 | 14.49 | temperature | 25 | 270 | < th | dose dependent | no | NA | NA |
| 416 | 14.50 | temperature | 25 | 270 | < th | dose dependent | rect. | 10 | 23 |
| 427 | 14.52 | temperature | 25 | 270 | < th | dose dependent | rect. | 12 | 23 |
| 436 | 14.54 | temperature | 25 | 270 | < th | dose dependent | sin | 20 | NA |
| 451 | 14.56 | temperature | 20 | 1440 | > th | dose independent | rect. | 9 | 22 |
| 463 | 14.58 | temperature | 20 | 1440 | < th | dose independent | rect. | 9 | 21 |
| 471 | 14.59 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 2 |
| 472 | 14.59 | wind | 1 | 43200 | < th | dose dependent | rect. | 4 | 4 |
| 487 | 14.60 | temperature | 25 | 270 | < th | dose dependent | rect. | 22 | 23 |
| 490 | 14.61 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 21 |
| 503 | 14.62 | temperature | 20 | 1440 | < th | dose independent | rect. | 1 | 21 |
| 509 | 14.62 | temperature | 20 | 1440 | > th | dose independent | rect. | 20 | 23 |
| 511 | 14.62 | wind | 1 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 526 | 14.63 | temperature | 20 | 1440 | > th | dose independent | rect. | 17 | 23 |
| 535 | 14.63 | temperature | 25 | 270 | < th | dose dependent | rect. | 19 | 23 |
| 536 | 14.64 | temperature | 20 | 1440 | > th | dose independent | no | NA | NA |
| 547 | 14.64 | temperature | 20 | 1440 | > th | dose independent | rect. | 15 | 23 |
| 577 | 14.65 | temperature | 20 | 1440 | < th | dose independent | rect. | 17 | 23 |
| 578 | 14.65 | temperature | 20 | 1440 | < th | dose independent | rect. | 20 | 23 |
| 580 | 14.65 | wind | 9 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 594 | 14.66 | temperature | 20 | 1440 | < th | dose independent | no | NA | NA |
| 697 | 14.69 | temperature | 20 | 1440 | < th | dose independent | rect. | 20 | 20 |
| 708 | 14.69 | temperature | 10 | 1440 | > th | dose dependent | rect. | 2 | 1 |
| 802 | 14.73 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 15 |
| 804 | 14.73 | temperature | 20 | 1440 | < th | dose independent | rect. | 1 | 15 |
| 821 | 14.74 | temperature | 20 | 1440 | > th | dose independent | sin | 4 | NA |
| 822 | 14.74 | temperature | 20 | 1440 | > th | dose independent | rect. | 2 | 13 |
| 823 | 14.74 | temperature | 20 | 1440 | < th | dose independent | rect. | 2 | 13 |
| 854 | 14.75 | temperature | 20 | 1440 | < th | dose independent | sin | 4 | NA |
| 855 | 14.75 | wind | 1 | 43200 | > th | dose independent | rect. | 22 | 9 |
| 872 | 14.75 | temperature | 10 | 1440 | > th | dose dependent | rect. | 23 | 6 |
| 943 | 14.78 | wind | 3 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 944 | 14.78 | wind | 1 | 43200 | < th | dose independent | rect. | 4 | 4 |