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Os01g0580100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Alg9-like mannosyltransferase family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.41 (0.0209) R2 : 0.566
β1 : 1.64 (0.0766) R2dD : 0.45 R2D : 0.254
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.698 (0.0447) R2dN8 : 0.311 R2N8 : 0.116
σ : 0.393
deviance : 70.59
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
61.69 0.369 6.38 1.58 0.177 -0.687 -0.768 -1.52 0.647 1.57 19.5 4274 -- --
63.71 0.372 6.44 1.46 0.182 -0.286 -0.756 -- 0.596 1.78 21.61 2992 -- --
63.8 0.372 6.37 1.6 0.187 -0.763 -- -1.72 0.655 1.5 19.2 4601 -- --
65.82 0.378 6.44 1.47 0.178 -0.303 -- -- 0.592 1.45 21.74 3017 -- --
65.47 0.377 6.36 1.59 -- -0.82 -- -1.89 0.653 -- 19.3 5555 -- --
66.16 0.381 6.42 1.6 0.188 -- -0.753 -- 0.689 1.6 -- -- -- --
68.42 0.387 6.41 1.63 0.188 -- -- -- 0.694 1.51 -- -- -- --
67.29 0.382 6.43 1.44 -- -0.394 -- -- 0.599 -- 20.34 2447 -- --
78.17 0.412 6.52 -- 0.172 -1.22 -- -- 0.216 1.59 18.54 47520 -- --
70.59 0.393 6.41 1.64 -- -- -- -- 0.698 -- -- -- -- --
138.25 0.55 6.45 -- 0.217 -- -- -- 0.513 1.76 -- -- -- --
79.94 0.416 6.52 -- -- -1.2 -- -- 0.192 -- 19.38 47520 -- --
141.12 0.554 6.45 -- -- -- -- -- 0.516 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 59.17 wind 1.0 14400 < th dose independent rect. 1 3
2 59.26 wind 1.0 43200 > th dose independent rect. 5 2
3 59.29 precipitation 0.1 14400 > th dose dependent rect. 3 14
4 59.31 wind 1.0 43200 < th dose dependent rect. 5 2
5 59.45 wind 1.0 43200 < th dose independent rect. 4 5
6 59.45 precipitation 0.1 14400 > th dose independent rect. 3 14
7 59.45 precipitation 0.1 14400 < th dose independent rect. 3 14
8 59.45 precipitation 0.1 14400 < th dose dependent rect. 3 14
9 59.46 wind 1.0 43200 < th dose independent rect. 24 8
12 59.51 wind 1.0 43200 > th dose independent rect. 4 5
13 59.53 wind 1.0 43200 < th dose dependent rect. 1 8
14 59.55 wind 1.0 43200 < th dose independent rect. 5 3
15 59.55 precipitation 0.1 14400 > th dose independent rect. 3 17
16 59.56 wind 1.0 43200 > th dose independent rect. 24 8
17 59.56 precipitation 0.1 14400 < th dose independent rect. 3 17
19 59.56 precipitation 0.1 14400 < th dose dependent rect. 3 17
20 59.57 wind 1.0 14400 > th dose independent rect. 1 3
27 59.61 precipitation 0.1 14400 > th dose dependent rect. 2 18
50 59.71 precipitation 0.1 14400 > th dose independent rect. 14 3
51 59.71 precipitation 0.1 14400 > th dose dependent rect. 14 3
55 59.72 precipitation 0.1 14400 < th dose independent rect. 14 3
56 59.72 precipitation 0.1 14400 > th dose dependent sin 3 NA
58 59.72 precipitation 0.1 14400 < th dose dependent rect. 14 3
79 59.82 wind 1.0 43200 < th dose dependent rect. 3 6
83 59.83 precipitation 0.1 14400 > th dose dependent rect. 7 10
85 59.84 precipitation 0.1 14400 > th dose independent rect. 9 8
87 59.85 precipitation 0.1 14400 < th dose independent rect. 9 8
89 59.85 precipitation 0.1 14400 < th dose dependent rect. 9 8
94 59.87 wind 1.0 14400 < th dose dependent rect. 2 2
97 59.88 precipitation 0.1 14400 > th dose independent rect. 7 10
99 59.89 precipitation 0.1 14400 < th dose independent rect. 7 10
103 59.89 precipitation 0.1 14400 < th dose dependent rect. 7 10
106 59.91 precipitation 0.1 14400 > th dose independent sin 1 NA
108 59.91 precipitation 0.1 14400 < th dose independent sin 1 NA
113 59.91 precipitation 0.1 14400 < th dose dependent sin 1 NA
115 59.91 precipitation 0.1 14400 > th dose dependent rect. 9 8
124 59.95 precipitation 0.1 14400 > th dose independent rect. 12 5
131 59.96 precipitation 0.1 14400 < th dose independent rect. 12 5
135 59.96 precipitation 0.1 4320 > th dose dependent rect. 1 5
136 59.96 precipitation 0.1 14400 < th dose dependent rect. 12 5
146 59.98 precipitation 0.1 4320 > th dose dependent rect. 1 7
153 60.00 precipitation 0.1 4320 > th dose independent rect. 3 2
154 60.00 precipitation 0.1 4320 < th dose independent rect. 3 2
157 60.00 precipitation 0.1 4320 < th dose dependent rect. 3 2
161 60.01 precipitation 0.1 4320 > th dose dependent rect. 3 2
203 60.12 precipitation 0.1 14400 > th dose dependent rect. 12 5
239 60.18 precipitation 0.1 4320 > th dose independent rect. 1 7
247 60.19 precipitation 0.1 4320 < th dose independent rect. 1 7
250 60.19 precipitation 0.1 4320 < th dose dependent rect. 1 7
252 60.20 precipitation 0.1 14400 > th dose independent rect. 7 13
261 60.21 precipitation 0.1 4320 > th dose independent rect. 1 5
262 60.21 precipitation 0.1 14400 < th dose independent rect. 7 13
265 60.21 precipitation 0.1 14400 < th dose dependent rect. 7 13
267 60.22 precipitation 0.1 4320 < th dose independent rect. 1 5
270 60.22 precipitation 0.1 4320 < th dose dependent rect. 1 5
289 60.28 wind 1.0 43200 < th dose independent sin 8 NA
315 60.31 precipitation 0.1 14400 > th dose dependent rect. 18 2
318 60.32 precipitation 0.1 14400 > th dose independent rect. 9 11
326 60.33 precipitation 0.1 14400 < th dose independent rect. 9 11
332 60.33 precipitation 0.1 14400 < th dose dependent rect. 9 11
397 60.43 precipitation 0.1 14400 > th dose independent rect. 12 8
407 60.44 precipitation 0.1 14400 > th dose independent rect. 14 6
409 60.44 precipitation 0.1 14400 < th dose independent rect. 12 8
411 60.44 precipitation 0.1 14400 < th dose dependent rect. 12 8
423 60.46 precipitation 0.1 14400 < th dose independent rect. 14 6
430 60.46 precipitation 0.1 14400 < th dose dependent rect. 14 6
501 60.54 precipitation 0.1 14400 > th dose dependent rect. 15 5
502 60.54 wind 1.0 43200 < th dose dependent rect. 18 12
522 60.57 precipitation 0.1 14400 > th dose dependent rect. 13 7
526 60.58 wind 1.0 43200 < th dose dependent sin 8 NA
531 60.58 wind 1.0 43200 < th dose dependent rect. 16 15
541 60.59 precipitation 0.1 14400 > th dose dependent rect. 9 11
648 60.73 precipitation 0.1 14400 > th dose independent rect. 18 2
661 60.73 precipitation 0.1 14400 > th dose dependent rect. 18 23
674 60.75 precipitation 0.1 14400 < th dose independent rect. 18 2
682 60.75 precipitation 0.1 14400 < th dose dependent rect. 18 2
701 60.77 precipitation 0.1 14400 > th dose dependent rect. 13 21
702 60.78 wind 1.0 43200 > th dose independent rect. 4 9
713 60.79 wind 1.0 4320 > th dose independent rect. 17 2
742 60.81 wind 1.0 43200 < th dose dependent rect. 12 1
787 60.84 precipitation 0.1 14400 > th dose dependent no NA NA
792 60.84 precipitation 0.1 14400 > th dose dependent rect. 15 19
795 60.84 precipitation 0.1 14400 > th dose dependent rect. 9 23
797 60.84 precipitation 0.1 14400 > th dose dependent rect. 15 23
855 60.88 precipitation 0.1 14400 > th dose dependent rect. 7 23
870 60.90 precipitation 0.1 14400 > th dose independent rect. 12 22
871 60.90 precipitation 0.1 14400 < th dose independent rect. 12 22
878 60.90 precipitation 0.1 14400 < th dose dependent rect. 12 22
879 60.91 wind 1.0 43200 < th dose independent rect. 4 9
909 60.93 humidity 80.0 1440 < th dose independent rect. 11 1
927 60.94 wind 1.0 43200 > th dose independent sin 8 NA
940 60.95 precipitation 0.1 14400 > th dose independent no NA NA
941 60.95 precipitation 0.1 14400 < th dose independent no NA NA
950 60.95 precipitation 0.1 14400 < th dose dependent no NA NA
960 60.96 precipitation 0.1 14400 > th dose independent rect. 9 23
961 60.96 precipitation 0.1 14400 < th dose independent rect. 9 23
964 60.96 precipitation 0.1 14400 < th dose dependent rect. 9 23
974 60.97 precipitation 0.1 14400 > th dose independent rect. 15 23
975 60.97 precipitation 0.1 14400 < th dose independent rect. 15 23
984 60.97 precipitation 0.1 14400 < th dose dependent rect. 15 23