BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os01g0580100 Os01g0580100|AK103451
         (553 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G14850.1  | chr5:4802099-4804977 REVERSE LENGTH=549            578   e-165
AT1G02145.3  | chr1:404627-408485 FORWARD LENGTH=498               56   6e-08

>AT5G14850.1 | chr5:4802099-4804977 REVERSE LENGTH=549
          Length = 548

 Score =  578 bits (1491), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 286/492 (58%), Positives = 357/492 (72%), Gaps = 31/492 (6%)

Query: 65  TYFNPDEHWQCLEVAHRIVFGYGHLTWEWKRGLRSYLHPFIFAALYKILSLLHLDSPWFM 124
           TYFNPDEHWQ LEVAHR +FGYG++TWEWKRG+RSYLHP +FA LYK+L +  LD+P+ M
Sbjct: 58  TYFNPDEHWQSLEVAHRTIFGYGYMTWEWKRGIRSYLHPMLFAFLYKLLQVTGLDTPYIM 117

Query: 125 AMAPRLLQSVFASFGDLYLYKLSKLIFNNHVAQWALFSQLVNWFMFFCITRTLSNSMETV 184
             APRL+QS+F++ GDLYLYKLS  ++  +VA W+LF Q+ NWF+FFC+ RT SN +ETV
Sbjct: 118 IKAPRLMQSIFSAIGDLYLYKLSDALYGGNVATWSLFCQMANWFIFFCLNRTFSNCLETV 177

Query: 185 LTVTGLYYWFVAIESVKGNSVVSKQQAASKQSPPSRKMXXXXXXXXXXXRPTSAITWLYV 244
           LT+ GLYYW      ++ +S+           P +RK            RPTSA+ WLYV
Sbjct: 178 LTIMGLYYW----PCIRDSSI---------DYPVNRKWGLVIAALACAIRPTSAVIWLYV 224

Query: 245 GLLDFIQMKSKSRFIFLEVVPLGVFVLAVTTFLDCWMYGSRIIVPLNFLKFNLFSSGGDY 304
           G+L+     +K +FI LEV+P+G  VL  T  LD  MYGS +IVPLNFLKFN  SSGGDY
Sbjct: 225 GMLELFLTPNKVKFIILEVIPIGSLVLGFTCLLDRLMYGSWVIVPLNFLKFNFLSSGGDY 284

Query: 305 YGTHVFHWYFSQGFPSMIWTFLPFSISGILKSREWRLAGLIVWVLVVYSILGHKEFRFVL 364
           YGTH +HWYF+QGF  M++TF PFSI+GI+KS+  +L+ LI+WVL +YSILGHKEFRFVL
Sbjct: 285 YGTHPWHWYFTQGFLVMLFTFTPFSIAGIIKSKNQKLSALILWVLAIYSILGHKEFRFVL 344

Query: 365 PVLPFMFMFSGHNLAAM--------------AQLKGKGHNEKGRLSRLKLSVILLILTNV 410
           PVLP   +FSG+  A M               Q+  + H +     +L+LSV  L+ TN+
Sbjct: 345 PVLPIALIFSGYAFAQMEVSGSSSSSSVTKKKQVPRQNHTKWS--PKLRLSVYFLLATNI 402

Query: 411 PMALYMSLYHQRGTEDAMLYLSREAHDGRVKSVLFLMPCHSTPYYSTLHYNLPMRFLDCT 470
           PMALYMSL+HQRGTEDAM YLS EA+ GRVKS+LFLMPCHSTPYYSTLH N+PM+FLDCT
Sbjct: 403 PMALYMSLFHQRGTEDAMNYLSDEAYKGRVKSILFLMPCHSTPYYSTLHRNIPMQFLDCT 462

Query: 471 PSENKGTLDESDRFLMNPADFVGEVFGNLSS-FSHIVLFESEERHVK-LLLRNSFQEVRR 528
           PS  KG LDESD+FL+NP  F  E+  N S   SHIVLF SEE  ++  ++++SF+EVRR
Sbjct: 463 PSAEKGELDESDQFLVNPLGFASELARNWSEPPSHIVLFASEETKLRDFMIQHSFKEVRR 522

Query: 529 FFHSHFKVDRDL 540
           FFH+HFKVDRDL
Sbjct: 523 FFHAHFKVDRDL 534



>AT1G02145.3 | chr1:404627-408485 FORWARD LENGTH=498
          Length = 497

 Score = 55.8 bits (133), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 78/180 (43%), Gaps = 10/180 (5%)

Query: 266 LGVFVLAV--TTFLDCWMYGSRIIVPLNFLKFNLFSSGGDYYGTHVFHWYFSQGFPSMIW 323
           +G  +LAV  T F+D  M+   +        FN   +    +GTH  HWYF+   P  + 
Sbjct: 217 VGTALLAVGLTIFVDSIMWKKFVWPEFEVFWFNSILNRSSDWGTHSIHWYFTSALPRSLL 276

Query: 324 TFLPFSISGILKSREWRLAGLIVWVL---VVYSILGHKEFRFVLPVLPFMFMFSGHNLAA 380
              P S+ G L  R  R+   IV VL   ++YS L HKE RF++  +P   MF+     A
Sbjct: 277 VAYPLSLLGTLVDR--RVPFFIVPVLSFVILYSKLPHKELRFIISSVP---MFNLSAAVA 331

Query: 381 MAQLKGKGHNEKGRLSRLKLSVILLILTNVPMALYMSLYHQRGTEDAMLYLSREAHDGRV 440
            +++         +L  + +     I     +  +M+ Y+   +  A+  L +  H   V
Sbjct: 332 ASRIYNNRKKTIWKLVNMVMLAFFAISAGCTVVTFMASYYNYPSGYALKRLHQIGHPANV 391



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.328    0.140    0.455 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 10,600,312
Number of extensions: 429456
Number of successful extensions: 1105
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 1101
Number of HSP's successfully gapped: 2
Length of query: 553
Length of database: 11,106,569
Length adjustment: 104
Effective length of query: 449
Effective length of database: 8,255,305
Effective search space: 3706631945
Effective search space used: 3706631945
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 114 (48.5 bits)