BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os12g0507000 Os12g0507000|AK065402
         (399 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os12g0507000  Similar to Molybdopterin biosynthesis CNX2 pro...   825   0.0  
Os02g0258900  Similar to Molybdopterin biosynthesis CNX2 pro...   752   0.0  

>Os12g0507000 Similar to Molybdopterin biosynthesis CNX2 protein (Molybdenum
           cofactor biosynthesis enzyme CNX2)
          Length = 399

 Score =  825 bits (2131), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 399/399 (100%), Positives = 399/399 (100%)

Query: 1   MMMPLRCLSELARRRRGCCRPDHAVDAMRAGLQCLMSTCSSTKATDNHSFSNTYATSCAN 60
           MMMPLRCLSELARRRRGCCRPDHAVDAMRAGLQCLMSTCSSTKATDNHSFSNTYATSCAN
Sbjct: 1   MMMPLRCLSELARRRRGCCRPDHAVDAMRAGLQCLMSTCSSTKATDNHSFSNTYATSCAN 60

Query: 61  LPEVAPSEAPLSDMLVDSFGRFHNYLRISLTERCNLRCQYCMPAEGVELTPSSELLSHDE 120
           LPEVAPSEAPLSDMLVDSFGRFHNYLRISLTERCNLRCQYCMPAEGVELTPSSELLSHDE
Sbjct: 61  LPEVAPSEAPLSDMLVDSFGRFHNYLRISLTERCNLRCQYCMPAEGVELTPSSELLSHDE 120

Query: 121 IIRVADLFVTSGVDKIRLTGGEPTIRKDIEDICLHLSGLKGLKTLAMTTNGLVLSKKLPR 180
           IIRVADLFVTSGVDKIRLTGGEPTIRKDIEDICLHLSGLKGLKTLAMTTNGLVLSKKLPR
Sbjct: 121 IIRVADLFVTSGVDKIRLTGGEPTIRKDIEDICLHLSGLKGLKTLAMTTNGLVLSKKLPR 180

Query: 181 LKECGLNALNISLDTLVPAKFEFMTRRKGHSRVMESIDAAIELGFQSVKVNCVVMRGMND 240
           LKECGLNALNISLDTLVPAKFEFMTRRKGHSRVMESIDAAIELGFQSVKVNCVVMRGMND
Sbjct: 181 LKECGLNALNISLDTLVPAKFEFMTRRKGHSRVMESIDAAIELGFQSVKVNCVVMRGMND 240

Query: 241 DEICDFVEMTRDKPVNVRFIEFMPFDGNVWNVKKLVPYAEIMDKVRQRFNGVERLQDHPS 300
           DEICDFVEMTRDKPVNVRFIEFMPFDGNVWNVKKLVPYAEIMDKVRQRFNGVERLQDHPS
Sbjct: 241 DEICDFVEMTRDKPVNVRFIEFMPFDGNVWNVKKLVPYAEIMDKVRQRFNGVERLQDHPS 300

Query: 301 ETAKNFKIDGHAGTISFITSMTQHFCAGCNRLRLLADGNLKVCLFGPSEVSLREPIRAGV 360
           ETAKNFKIDGHAGTISFITSMTQHFCAGCNRLRLLADGNLKVCLFGPSEVSLREPIRAGV
Sbjct: 301 ETAKNFKIDGHAGTISFITSMTQHFCAGCNRLRLLADGNLKVCLFGPSEVSLREPIRAGV 360

Query: 361 DDAGLREIISAAVKRKKAKHAGMFDIAKTANRPMIHIGG 399
           DDAGLREIISAAVKRKKAKHAGMFDIAKTANRPMIHIGG
Sbjct: 361 DDAGLREIISAAVKRKKAKHAGMFDIAKTANRPMIHIGG 399



>Os02g0258900 Similar to Molybdopterin biosynthesis CNX2 protein (Molybdenum
           cofactor biosynthesis enzyme CNX2)
          Length = 394

 Score =  752 bits (1942), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/400 (92%), Positives = 381/400 (95%), Gaps = 8/400 (2%)

Query: 1   MMMPLRCLSELARRRRGCCRPDHAVDAMRAGLQCLMSTCSSTKATDNHSFSNTYATS-CA 59
           MMMPLRCLSELARRR     PD AVDAMR GL+CLMSTC  +KATD+      YATS CA
Sbjct: 2   MMMPLRCLSELARRR-----PDRAVDAMRVGLRCLMSTCPLSKATDDSQ--RLYATSSCA 54

Query: 60  NLPEVAPSEAPLSDMLVDSFGRFHNYLRISLTERCNLRCQYCMPAEGVELTPSSELLSHD 119
           N+PEVA SEAPLSDMLVDSFGRFHNYLRISLTERCNLRCQYCMPA+GV+LTP+SELLSHD
Sbjct: 55  NVPEVALSEAPLSDMLVDSFGRFHNYLRISLTERCNLRCQYCMPAQGVQLTPNSELLSHD 114

Query: 120 EIIRVADLFVTSGVDKIRLTGGEPTIRKDIEDICLHLSGLKGLKTLAMTTNGLVLSKKLP 179
           EIIRVA LFVTSGVDKIRLTGGEPTIRKDIEDICLHLSGLKGLKTLAMTTNGLVLSKKLP
Sbjct: 115 EIIRVAGLFVTSGVDKIRLTGGEPTIRKDIEDICLHLSGLKGLKTLAMTTNGLVLSKKLP 174

Query: 180 RLKECGLNALNISLDTLVPAKFEFMTRRKGHSRVMESIDAAIELGFQSVKVNCVVMRGMN 239
           RLKECGLNALNISLDTLVPAKFEFMTRRKGHSRVMESIDA+I+LGFQSVKVNCVVMRGMN
Sbjct: 175 RLKECGLNALNISLDTLVPAKFEFMTRRKGHSRVMESIDASIQLGFQSVKVNCVVMRGMN 234

Query: 240 DDEICDFVEMTRDKPVNVRFIEFMPFDGNVWNVKKLVPYAEIMDKVRQRFNGVERLQDHP 299
           DDEICDFVEMTRDKPVNVRFIEFMPFDGNVWNVKKLVPYAE+MDKVRQRF GVERLQDHP
Sbjct: 235 DDEICDFVEMTRDKPVNVRFIEFMPFDGNVWNVKKLVPYAEMMDKVRQRFKGVERLQDHP 294

Query: 300 SETAKNFKIDGHAGTISFITSMTQHFCAGCNRLRLLADGNLKVCLFGPSEVSLREPIRAG 359
           SETAKNFKIDGHAGTISFITSMT+HFCAGCNRLRLLADGNLKVCLFGPSEVSLREPIRAG
Sbjct: 295 SETAKNFKIDGHAGTISFITSMTEHFCAGCNRLRLLADGNLKVCLFGPSEVSLREPIRAG 354

Query: 360 VDDAGLREIISAAVKRKKAKHAGMFDIAKTANRPMIHIGG 399
           VDDAGLREIISAAVKRKKAKHAGMFDIAKTANRPMIHIGG
Sbjct: 355 VDDAGLREIISAAVKRKKAKHAGMFDIAKTANRPMIHIGG 394



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.323    0.137    0.410 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 13,138,093
Number of extensions: 528204
Number of successful extensions: 1106
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 1104
Number of HSP's successfully gapped: 2
Length of query: 399
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 296
Effective length of database: 11,657,759
Effective search space: 3450696664
Effective search space used: 3450696664
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 157 (65.1 bits)