Os02g0258900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Molybdopterin biosynthesis CNX2 protein (Molybdenum cofactor biosynthesis enzyme CNX2).
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Os02g0258900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Molybdopterin biosynthesis CNX2 protein (Molybdenum cofactor biosynthesis enzyme CNX2).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 96.98 | 0.463 | 8.11 | -1.84 | 1.46 | -1.26 | -1.02 | 3.94 | -0.0401 | 0.925 | 25.15 | 1221 | -- | -- |
| 98.55 | 0.462 | 8.17 | -2.69 | 1.38 | -0.927 | -0.857 | -- | -0.0199 | 0.94 | 24.69 | 9815 | -- | -- |
| 100.31 | 0.466 | 8.14 | -1.87 | 1.49 | -1.31 | -- | 3.94 | -0.133 | 0.779 | 26.2 | 1191 | -- | -- |
| 101.8 | 0.47 | 8.17 | -2.67 | 1.37 | -0.928 | -- | -- | -0.0204 | 0.87 | 24.78 | 9782 | -- | -- |
| 181.9 | 0.632 | 8.18 | -2.54 | -- | -1.79 | -- | 3.09 | -0.244 | -- | 26.2 | 1191 | -- | -- |
| 128.63 | 0.532 | 8.25 | -3.1 | 1.29 | -- | -0.993 | -- | -0.38 | 0.944 | -- | -- | -- | -- |
| 132.71 | 0.539 | 8.25 | -3.07 | 1.29 | -- | -- | -- | -0.374 | 0.847 | -- | -- | -- | -- |
| 167.58 | 0.606 | 8.17 | -2.72 | -- | -1.67 | -- | -- | -0.101 | -- | 22.2 | 10361 | -- | -- |
| 141.83 | 0.555 | 8.01 | -- | 1.34 | -2.46 | -- | -- | 0.717 | 0.849 | 12.58 | 47520 | -- | -- |
| 236.07 | 0.718 | 8.23 | -3.02 | -- | -- | -- | -- | -0.35 | -- | -- | -- | -- | -- |
| 380.8 | 0.913 | 8.17 | -- | 1.24 | -- | -- | -- | -0.0324 | 0.736 | -- | -- | -- | -- |
| 253.2 | 0.741 | 7.99 | -- | -- | -2.38 | -- | -- | 0.71 | -- | 12.3 | 47520 | -- | -- |
| 476.78 | 1.02 | 8.15 | -- | -- | -- | -- | -- | -0.0151 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 87.64 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 2 |
| 2 | 87.64 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 2 |
| 3 | 88.23 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 2 |
| 4 | 88.39 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 2 |
| 7 | 90.47 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 5 |
| 8 | 90.47 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 5 |
| 10 | 90.76 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 5 |
| 12 | 90.81 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 5 |
| 15 | 91.22 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 20 | 91.61 | wind | 9.0 | 14400 | < th | dose independent | sin | 6 | NA |
| 23 | 91.81 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 24 | 91.91 | wind | 7.0 | 14400 | > th | dose independent | rect. | 11 | 2 |
| 30 | 92.10 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 20 | 9 |
| 39 | 92.44 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 12 | 4 |
| 42 | 92.50 | wind | 9.0 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 43 | 92.52 | wind | 9.0 | 14400 | < th | dose independent | rect. | 1 | 14 |
| 47 | 92.59 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 11 | 2 |
| 48 | 92.61 | wind | 9.0 | 14400 | < th | dose independent | rect. | 3 | 12 |
| 53 | 92.70 | radiation | 40.0 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 61 | 92.94 | wind | 9.0 | 14400 | < th | dose independent | rect. | 23 | 16 |
| 70 | 93.12 | wind | 7.0 | 14400 | > th | dose independent | rect. | 3 | 11 |
| 82 | 93.48 | wind | 9.0 | 14400 | < th | dose independent | rect. | 3 | 9 |
| 91 | 93.64 | wind | 9.0 | 14400 | > th | dose independent | sin | 7 | NA |
| 123 | 94.04 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 3 | 10 |
| 130 | 94.09 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 155 | 94.34 | wind | 9.0 | 14400 | < th | dose independent | rect. | 9 | 6 |
| 163 | 94.39 | wind | 9.0 | 14400 | > th | dose independent | rect. | 20 | 19 |
| 165 | 94.41 | wind | 7.0 | 14400 | > th | dose dependent | sin | 6 | NA |
| 173 | 94.50 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 18 | 10 |
| 185 | 94.57 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 7 | 7 |
| 189 | 94.59 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 22 | 1 |
| 191 | 94.61 | radiation | 30.0 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 221 | 94.76 | radiation | 40.0 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 222 | 94.76 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 20 | 8 |
| 245 | 94.93 | radiation | 40.0 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 251 | 94.97 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 23 | 5 |
| 288 | 95.27 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 298 | 95.33 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 22 | 7 |
| 301 | 95.35 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 17 | 15 |
| 306 | 95.40 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 20 | 9 |
| 314 | 95.44 | radiation | 40.0 | 43200 | < th | dose independent | rect. | 15 | 20 |
| 347 | 95.61 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 17 | 5 |
| 376 | 95.73 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 18 | 23 |
| 380 | 95.75 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 9 | 1 |
| 408 | 95.90 | wind | 5.0 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 447 | 96.08 | radiation | 30.0 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 465 | 96.10 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 7 | 7 |
| 515 | 96.36 | radiation | 40.0 | 14400 | > th | dose dependent | rect. | 15 | 17 |
| 529 | 96.41 | radiation | 40.0 | 43200 | < th | dose independent | rect. | 3 | 8 |
| 534 | 96.42 | radiation | 40.0 | 43200 | < th | dose independent | rect. | 5 | 6 |
| 540 | 96.43 | radiation | 40.0 | 43200 | < th | dose independent | rect. | 7 | 4 |
| 577 | 96.54 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 9 | 18 |
| 584 | 96.58 | wind | 1.0 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 591 | 96.59 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 13 | 12 |
| 593 | 96.60 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 17 | 8 |
| 601 | 96.61 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 15 | 10 |
| 606 | 96.62 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 3 | 1 |
| 635 | 96.69 | humidity | 90.0 | 14400 | < th | dose independent | sin | 17 | NA |
| 638 | 96.70 | wind | 1.0 | 14400 | < th | dose independent | rect. | 9 | 1 |
| 668 | 96.75 | wind | 5.0 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 687 | 96.81 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 15 | NA |
| 688 | 96.81 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 719 | 96.86 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 9 | 21 |
| 720 | 96.87 | radiation | 40.0 | 43200 | < th | dose independent | sin | 10 | NA |
| 731 | 96.91 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 2 | 21 |
| 736 | 96.94 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 745 | 96.95 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 749 | 96.97 | wind | 3.0 | 14400 | < th | dose independent | rect. | 3 | 1 |
| 751 | 96.97 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 9 | 18 |
| 752 | 96.97 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 9 | 1 |
| 766 | 97.01 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 16 | 2 |
| 782 | 97.06 | wind | 1.0 | 43200 | < th | dose independent | rect. | 19 | 9 |
| 798 | 97.12 | wind | 3.0 | 14400 | > th | dose independent | rect. | 3 | 1 |
| 803 | 97.14 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 13 | 14 |
| 809 | 97.15 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 12 | 18 |
| 814 | 97.17 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 15 | 12 |
| 821 | 97.19 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 9 | 18 |
| 834 | 97.21 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 13 | 14 |
| 840 | 97.23 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 4 | 12 |
| 845 | 97.24 | humidity | 90.0 | 14400 | > th | dose independent | sin | 16 | NA |
| 860 | 97.27 | wind | 1.0 | 43200 | < th | dose dependent | sin | 13 | NA |
| 882 | 97.31 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 12 | 1 |
| 898 | 97.34 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 13 | 6 |
| 946 | 97.41 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 17 | 15 |
| 997 | 97.49 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 5 | 14 |
| 1000 | 97.50 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 11 | 1 |