BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os02g0258900 Os02g0258900|AK100565
         (394 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os02g0258900  Similar to Molybdopterin biosynthesis CNX2 pro...   813   0.0  
Os12g0507000  Similar to Molybdopterin biosynthesis CNX2 pro...   752   0.0  

>Os02g0258900 Similar to Molybdopterin biosynthesis CNX2 protein (Molybdenum
           cofactor biosynthesis enzyme CNX2)
          Length = 394

 Score =  813 bits (2100), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 394/394 (100%), Positives = 394/394 (100%)

Query: 1   MMMMPLRCLSELARRRPDRAVDAMRVGLRCLMSTCPLSKATDDSQRLYATSSCANVPEVA 60
           MMMMPLRCLSELARRRPDRAVDAMRVGLRCLMSTCPLSKATDDSQRLYATSSCANVPEVA
Sbjct: 1   MMMMPLRCLSELARRRPDRAVDAMRVGLRCLMSTCPLSKATDDSQRLYATSSCANVPEVA 60

Query: 61  LSEAPLSDMLVDSFGRFHNYLRISLTERCNLRCQYCMPAQGVQLTPNSELLSHDEIIRVA 120
           LSEAPLSDMLVDSFGRFHNYLRISLTERCNLRCQYCMPAQGVQLTPNSELLSHDEIIRVA
Sbjct: 61  LSEAPLSDMLVDSFGRFHNYLRISLTERCNLRCQYCMPAQGVQLTPNSELLSHDEIIRVA 120

Query: 121 GLFVTSGVDKIRLTGGEPTIRKDIEDICLHLSGLKGLKTLAMTTNGLVLSKKLPRLKECG 180
           GLFVTSGVDKIRLTGGEPTIRKDIEDICLHLSGLKGLKTLAMTTNGLVLSKKLPRLKECG
Sbjct: 121 GLFVTSGVDKIRLTGGEPTIRKDIEDICLHLSGLKGLKTLAMTTNGLVLSKKLPRLKECG 180

Query: 181 LNALNISLDTLVPAKFEFMTRRKGHSRVMESIDASIQLGFQSVKVNCVVMRGMNDDEICD 240
           LNALNISLDTLVPAKFEFMTRRKGHSRVMESIDASIQLGFQSVKVNCVVMRGMNDDEICD
Sbjct: 181 LNALNISLDTLVPAKFEFMTRRKGHSRVMESIDASIQLGFQSVKVNCVVMRGMNDDEICD 240

Query: 241 FVEMTRDKPVNVRFIEFMPFDGNVWNVKKLVPYAEMMDKVRQRFKGVERLQDHPSETAKN 300
           FVEMTRDKPVNVRFIEFMPFDGNVWNVKKLVPYAEMMDKVRQRFKGVERLQDHPSETAKN
Sbjct: 241 FVEMTRDKPVNVRFIEFMPFDGNVWNVKKLVPYAEMMDKVRQRFKGVERLQDHPSETAKN 300

Query: 301 FKIDGHAGTISFITSMTEHFCAGCNRLRLLADGNLKVCLFGPSEVSLREPIRAGVDDAGL 360
           FKIDGHAGTISFITSMTEHFCAGCNRLRLLADGNLKVCLFGPSEVSLREPIRAGVDDAGL
Sbjct: 301 FKIDGHAGTISFITSMTEHFCAGCNRLRLLADGNLKVCLFGPSEVSLREPIRAGVDDAGL 360

Query: 361 REIISAAVKRKKAKHAGMFDIAKTANRPMIHIGG 394
           REIISAAVKRKKAKHAGMFDIAKTANRPMIHIGG
Sbjct: 361 REIISAAVKRKKAKHAGMFDIAKTANRPMIHIGG 394



>Os12g0507000 Similar to Molybdopterin biosynthesis CNX2 protein (Molybdenum
           cofactor biosynthesis enzyme CNX2)
          Length = 399

 Score =  752 bits (1942), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/400 (92%), Positives = 381/400 (95%), Gaps = 8/400 (2%)

Query: 2   MMMPLRCLSELARRR-----PDRAVDAMRVGLRCLMSTCPLSKATDDSQ--RLYATSSCA 54
           MMMPLRCLSELARRR     PD AVDAMR GL+CLMSTC  +KATD+      YATS CA
Sbjct: 1   MMMPLRCLSELARRRRGCCRPDHAVDAMRAGLQCLMSTCSSTKATDNHSFSNTYATS-CA 59

Query: 55  NVPEVALSEAPLSDMLVDSFGRFHNYLRISLTERCNLRCQYCMPAQGVQLTPNSELLSHD 114
           N+PEVA SEAPLSDMLVDSFGRFHNYLRISLTERCNLRCQYCMPA+GV+LTP+SELLSHD
Sbjct: 60  NLPEVAPSEAPLSDMLVDSFGRFHNYLRISLTERCNLRCQYCMPAEGVELTPSSELLSHD 119

Query: 115 EIIRVAGLFVTSGVDKIRLTGGEPTIRKDIEDICLHLSGLKGLKTLAMTTNGLVLSKKLP 174
           EIIRVA LFVTSGVDKIRLTGGEPTIRKDIEDICLHLSGLKGLKTLAMTTNGLVLSKKLP
Sbjct: 120 EIIRVADLFVTSGVDKIRLTGGEPTIRKDIEDICLHLSGLKGLKTLAMTTNGLVLSKKLP 179

Query: 175 RLKECGLNALNISLDTLVPAKFEFMTRRKGHSRVMESIDASIQLGFQSVKVNCVVMRGMN 234
           RLKECGLNALNISLDTLVPAKFEFMTRRKGHSRVMESIDA+I+LGFQSVKVNCVVMRGMN
Sbjct: 180 RLKECGLNALNISLDTLVPAKFEFMTRRKGHSRVMESIDAAIELGFQSVKVNCVVMRGMN 239

Query: 235 DDEICDFVEMTRDKPVNVRFIEFMPFDGNVWNVKKLVPYAEMMDKVRQRFKGVERLQDHP 294
           DDEICDFVEMTRDKPVNVRFIEFMPFDGNVWNVKKLVPYAE+MDKVRQRF GVERLQDHP
Sbjct: 240 DDEICDFVEMTRDKPVNVRFIEFMPFDGNVWNVKKLVPYAEIMDKVRQRFNGVERLQDHP 299

Query: 295 SETAKNFKIDGHAGTISFITSMTEHFCAGCNRLRLLADGNLKVCLFGPSEVSLREPIRAG 354
           SETAKNFKIDGHAGTISFITSMT+HFCAGCNRLRLLADGNLKVCLFGPSEVSLREPIRAG
Sbjct: 300 SETAKNFKIDGHAGTISFITSMTQHFCAGCNRLRLLADGNLKVCLFGPSEVSLREPIRAG 359

Query: 355 VDDAGLREIISAAVKRKKAKHAGMFDIAKTANRPMIHIGG 394
           VDDAGLREIISAAVKRKKAKHAGMFDIAKTANRPMIHIGG
Sbjct: 360 VDDAGLREIISAAVKRKKAKHAGMFDIAKTANRPMIHIGG 399



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.323    0.137    0.408 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 12,569,773
Number of extensions: 495546
Number of successful extensions: 970
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 968
Number of HSP's successfully gapped: 2
Length of query: 394
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 291
Effective length of database: 11,657,759
Effective search space: 3392407869
Effective search space used: 3392407869
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 157 (65.1 bits)