Os12g0507000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Molybdopterin biosynthesis CNX2 protein (Molybdenum cofactor biosynthesis enzyme CNX2).
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Os12g0507000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Molybdopterin biosynthesis CNX2 protein (Molybdenum cofactor biosynthesis enzyme CNX2).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 191.2 | 0.65 | 8.99 | -0.477 | 1.54 | -1.56 | 2.8 | 2.2 | 0.0406 | 18.6 | 0.95 | 27 | 22 | -- |
| 202.17 | 0.667 | 8.97 | -0.494 | 1.29 | -1.87 | 1.99 | -- | 0.0531 | 17.8 | 1.65 | 17 | 22.3 | -- |
| 203.22 | 0.669 | 8.99 | -0.494 | 1.53 | -1.49 | -- | 1.1 | 0.0277 | 18.8 | 0.96 | 30 | 21.8 | -- |
| 206.21 | 0.673 | 8.99 | -0.514 | 1.63 | -1.39 | -- | -- | 0.0473 | 19.2 | 1.65 | 17 | 22.3 | -- |
| 241.36 | 0.724 | 8.95 | -0.519 | -- | -2.76 | -- | 0.173 | 0.028 | -- | -35.23 | 935 | 5.38 | -- |
| 241.33 | 0.728 | 9.03 | -0.522 | 2.78 | -- | -0.129 | -- | 0.0132 | 20.4 | -- | -- | -- | -- |
| 241.38 | 0.728 | 9.03 | -0.517 | 2.78 | -- | -- | -- | 0.0133 | 20.4 | -- | -- | -- | -- |
| 241.38 | 0.724 | 8.95 | -0.517 | -- | -2.76 | -- | -- | 0.0134 | -- | -34.64 | 936 | 5.4 | -- |
| 213.16 | 0.684 | 8.98 | -- | 1.63 | -1.39 | -- | -- | 0.105 | 19.1 | 1.65 | 17 | 22.3 | -- |
| 670.71 | 1.21 | 8.96 | -0.533 | -- | -- | -- | -- | -0.0152 | -- | -- | -- | -- | -- |
| 248.44 | 0.737 | 9.02 | -- | 2.78 | -- | -- | -- | 0.0709 | 20.4 | -- | -- | -- | -- |
| 248.44 | 0.734 | 8.94 | -- | -- | -2.77 | -- | -- | 0.0707 | -- | -3.632 | 538 | 2.1 | -- |
| 678.19 | 1.22 | 8.95 | -- | -- | -- | -- | -- | 0.0439 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 189.59 | radiation | 1.0 | 30 | < th | dose independent | rect. | 23 | 18 |
| 7 | 191.37 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 23 | 18 |
| 8 | 191.85 | radiation | 1.0 | 30 | > th | dose independent | sin | 4 | NA |
| 18 | 193.20 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 21 | 20 |
| 20 | 193.40 | radiation | 1.0 | 30 | < th | dose independent | sin | 6 | NA |
| 48 | 194.93 | radiation | 1.0 | 30 | < th | dose dependent | sin | 5 | NA |
| 73 | 196.07 | radiation | 1.0 | 30 | < th | dose independent | rect. | 23 | 9 |
| 80 | 196.28 | radiation | 1.0 | 90 | < th | dose independent | rect. | 21 | 22 |
| 84 | 196.34 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 9 |
| 85 | 196.34 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 9 |
| 129 | 198.15 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 21 | 11 |
| 139 | 198.45 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 23 | 9 |
| 159 | 198.95 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 4 | 17 |
| 169 | 199.23 | humidity | 50.0 | 270 | > th | dose independent | rect. | 2 | 9 |
| 170 | 199.31 | wind | 1.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 172 | 199.33 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 4 | 17 |
| 173 | 199.33 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 4 | 17 |
| 178 | 199.43 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 17 | 15 |
| 179 | 199.43 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 17 | 15 |
| 183 | 199.49 | temperature | 10.0 | 270 | > th | dose independent | rect. | 21 | 7 |
| 184 | 199.49 | temperature | 30.0 | 270 | < th | dose independent | rect. | 21 | 7 |
| 185 | 199.49 | humidity | 50.0 | 270 | > th | dose independent | rect. | 21 | 7 |
| 188 | 199.49 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 21 | 7 |
| 189 | 199.49 | radiation | 1.0 | 270 | < th | dose independent | rect. | 21 | 7 |
| 194 | 199.49 | temperature | 10.0 | 270 | > th | dose independent | rect. | 4 | 17 |
| 195 | 199.49 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 21 | 7 |
| 203 | 199.58 | wind | 9.0 | 270 | < th | dose independent | rect. | 21 | 7 |
| 211 | 199.81 | wind | 9.0 | 270 | < th | dose independent | rect. | 11 | 15 |
| 212 | 199.82 | wind | 7.0 | 270 | < th | dose independent | rect. | 8 | 9 |
| 222 | 200.00 | radiation | 1.0 | 270 | < th | dose dependent | sin | 11 | NA |
| 259 | 200.39 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 4 | 17 |
| 264 | 200.58 | radiation | 1.0 | 10 | > th | dose independent | rect. | 5 | 7 |
| 281 | 200.70 | temperature | 30.0 | 270 | < th | dose independent | rect. | 3 | 8 |
| 303 | 200.84 | temperature | 10.0 | 270 | > th | dose independent | rect. | 2 | 9 |
| 304 | 200.84 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 2 | 9 |
| 305 | 200.84 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 2 | 9 |
| 306 | 200.84 | temperature | 10.0 | 270 | > th | dose independent | rect. | 11 | 15 |
| 319 | 201.12 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 16 | 17 |
| 328 | 201.29 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 21 | 7 |
| 329 | 201.29 | wind | 9.0 | 270 | < th | dose independent | rect. | 2 | 9 |
| 334 | 201.29 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 21 | 7 |
| 341 | 201.51 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 11 | 15 |
| 342 | 201.51 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 11 | 15 |
| 344 | 201.56 | radiation | 20.0 | 270 | < th | dose independent | rect. | 17 | 15 |
| 345 | 201.56 | temperature | 25.0 | 10 | < th | dose independent | rect. | 12 | 20 |
| 359 | 201.80 | wind | 1.0 | 90 | > th | dose independent | rect. | 23 | 7 |
| 379 | 202.05 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 21 | 7 |
| 382 | 202.10 | wind | 9.0 | 270 | < th | dose independent | rect. | 4 | 17 |
| 402 | 202.22 | temperature | 20.0 | 270 | > th | dose independent | rect. | 7 | 9 |
| 433 | 202.38 | wind | 9.0 | 270 | < th | dose dependent | rect. | 8 | 8 |
| 472 | 202.64 | radiation | 1.0 | 270 | < th | dose independent | sin | 11 | NA |
| 478 | 202.67 | wind | 1.0 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 520 | 203.10 | temperature | 10.0 | 270 | > th | dose independent | rect. | 8 | 9 |
| 521 | 203.10 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 8 | 9 |
| 522 | 203.10 | wind | 7.0 | 270 | < th | dose independent | rect. | 17 | 15 |
| 523 | 203.10 | temperature | 10.0 | 270 | > th | dose independent | rect. | 17 | 15 |
| 524 | 203.10 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 17 | 15 |
| 569 | 203.54 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 8 | 9 |
| 571 | 203.54 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 8 | 9 |
| 634 | 203.99 | humidity | 50.0 | 270 | > th | dose independent | rect. | 11 | 16 |
| 638 | 204.01 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 12 | 17 |
| 650 | 204.03 | temperature | 25.0 | 30 | < th | dose independent | rect. | 13 | 15 |
| 689 | 204.15 | humidity | 50.0 | 270 | > th | dose independent | rect. | 17 | 15 |
| 696 | 204.21 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 9 | 18 |
| 697 | 204.22 | radiation | 40.0 | 270 | < th | dose independent | rect. | 1 | 9 |
| 698 | 204.22 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 7 | 8 |
| 727 | 204.29 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 6 | 20 |
| 751 | 204.48 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 19 | 4 |
| 754 | 204.49 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 6 | 20 |
| 825 | 204.84 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 18 | 9 |
| 830 | 204.88 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 18 | 13 |
| 843 | 204.95 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 11 | 16 |
| 856 | 205.01 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 5 | 18 |
| 879 | 205.23 | precipitation | 0.1 | 270 | < th | dose independent | sin | 7 | NA |
| 881 | 205.23 | precipitation | 0.1 | 270 | < th | dose dependent | sin | 7 | NA |
| 916 | 205.50 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 6 | 22 |
| 921 | 205.55 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 8 | 20 |
| 947 | 205.67 | humidity | 50.0 | 270 | > th | dose independent | rect. | 4 | 17 |
| 948 | 205.69 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 8 | 8 |
| 955 | 205.77 | temperature | 25.0 | 270 | < th | dose independent | sin | 7 | NA |
| 977 | 205.84 | temperature | 25.0 | 270 | < th | dose independent | rect. | 10 | 21 |
| 988 | 205.87 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 23 | 6 |