BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os12g0283400 Os12g0283400|AK110798
         (228 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os12g0283400  Glutelin family protein                             251   3e-67
Os08g0108100  Pectinesterase inhibitor domain containing pro...   167   7e-42
AK111367                                                          102   3e-22

>Os12g0283400 Glutelin family protein
          Length = 228

 Score =  251 bits (641), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 142/228 (62%), Positives = 142/228 (62%)

Query: 1   MASMAPSAMXXXXXXXXXXXPSSTLCSRAGPSSKXXXXXXXAKRXXXXXXXXXXXXXXXX 60
           MASMAPSAM           PSSTLCSRAGPSSK       AKR                
Sbjct: 1   MASMAPSAMVLIVLLVLVVLPSSTLCSRAGPSSKHGHGGGHAKRVPPPASVPPPPPPPPA 60

Query: 61  XXXLVRATCNSTSYYDLCVAELSADPSSATADVRGLXXXXXXXXXXXXXXXXXXXXXXXX 120
              LVRATCNSTSYYDLCVAELSADPSSATADVRGL                        
Sbjct: 61  PAALVRATCNSTSYYDLCVAELSADPSSATADVRGLSSIAVSAAAANASGAAQAASALAN 120

Query: 121 XXXXXXXXXXXXXXXXXXXQRLLATCAAKYGDARDALAAAKGSIAQQDYDMASVHVSAAA 180
                              QRLLATCAAKYGDARDALAAAKGSIAQQDYDMASVHVSAAA
Sbjct: 121 ATDAGTTAGVAGDGGGAVVQRLLATCAAKYGDARDALAAAKGSIAQQDYDMASVHVSAAA 180

Query: 181 EYPQVCRTLFGRQSPGDYPPELAATEVALRQLCSVALDIIAXXXXXXN 228
           EYPQVCRTLFGRQSPGDYPPELAATEVALRQLCSVALDIIA      N
Sbjct: 181 EYPQVCRTLFGRQSPGDYPPELAATEVALRQLCSVALDIIALLSSSSN 228



>Os08g0108100 Pectinesterase inhibitor domain containing protein
          Length = 227

 Score =  167 bits (422), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 100/198 (50%), Positives = 110/198 (55%), Gaps = 6/198 (3%)

Query: 24  TLCSRAGPSSKXXXXXXXAKRXXXXXXXXXXXXXXXXXXXLVRATCNSTSYYDLCVAELS 83
           TLCSR+GP S        AKR                   LVRATCNST+YYD+CV+ L+
Sbjct: 23  TLCSRSGPPSSKHGHGGHAKRAPPPASPVVPVAPQAAA--LVRATCNSTAYYDVCVSALA 80

Query: 84  ADPSSATADVRGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRLL 143
           ADPSS TADVRGL                                           Q LL
Sbjct: 81  ADPSSTTADVRGLSAIAVSVAAANASGAAQAAAALANGTAPLAAAAAGDGTV----QALL 136

Query: 144 ATCAAKYGDARDALAAAKGSIAQQDYDMASVHVSAAAEYPQVCRTLFGRQSPGDYPPELA 203
             CA KYGDARDALAAAK S+ QQDYD+A+VHVSA AEYPQVC+ LF RQ PG YP ELA
Sbjct: 137 RACAGKYGDARDALAAAKESMGQQDYDLATVHVSAGAEYPQVCKALFRRQRPGAYPAELA 196

Query: 204 ATEVALRQLCSVALDIIA 221
           A E AL +LCSVALDIIA
Sbjct: 197 AREEALNKLCSVALDIIA 214



>AK111367 
          Length = 192

 Score =  102 bits (254), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 66/155 (42%), Positives = 83/155 (53%), Gaps = 15/155 (9%)

Query: 64  LVRATCNSTSYYDLCVAELSADPSSATA-DVRGLXXXXXXXXXXXXXXXXXXXXXXXXXX 122
           LV++TCNST+YYD+CVA L+ADPS +TA DVRGL                          
Sbjct: 38  LVQSTCNSTTYYDVCVAALAADPSISTAADVRGLCAIAVSAAATNASAAGASLLASAAAY 97

Query: 123 XXXXXXXXXXXXXXXXXQRLLATCAAKYGDARDALAAAKGSIAQQDYDMASVHVSAAAEY 182
                              LL  CAA+Y DAR AL +A+ +I ++ YD A VHVSAAA+Y
Sbjct: 98  QSQPQAP------------LLRACAARYADARQALISAQEAIKEEAYDYAFVHVSAAAQY 145

Query: 183 PQVCRTLFGRQSPGD--YPPELAATEVALRQLCSV 215
           P +CR LF R S     YP +LA  E  LR+LC+V
Sbjct: 146 PTMCRALFRRASSQQRAYPSDLAKREEGLRRLCTV 180



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.316    0.124    0.355 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 4,566,360
Number of extensions: 115569
Number of successful extensions: 406
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 403
Number of HSP's successfully gapped: 5
Length of query: 228
Length of database: 17,035,801
Length adjustment: 97
Effective length of query: 131
Effective length of database: 11,971,043
Effective search space: 1568206633
Effective search space used: 1568206633
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 154 (63.9 bits)