BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os12g0133400 Os12g0133400|AK071502
         (282 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os12g0133400  4\'-phosphopantetheinyl transferase domain con...   590   e-169
Os11g0136500  4\'-phosphopantetheinyl transferase domain con...   552   e-158

>Os12g0133400 4\'-phosphopantetheinyl transferase domain containing protein
          Length = 282

 Score =  590 bits (1521), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 282/282 (100%), Positives = 282/282 (100%)

Query: 1   MMEEGEKQSSGGRWRCRWLVDVGRWRPSPAEFQAAAAVLPPHDRPAIHRFVREEDRKRAL 60
           MMEEGEKQSSGGRWRCRWLVDVGRWRPSPAEFQAAAAVLPPHDRPAIHRFVREEDRKRAL
Sbjct: 1   MMEEGEKQSSGGRWRCRWLVDVGRWRPSPAEFQAAAAVLPPHDRPAIHRFVREEDRKRAL 60

Query: 61  VSRLLKYSLVHHALGMPFHQIRINRTLEGKPYLNKNVNLPGFNFNTSHQGEYVGIASEPL 120
           VSRLLKYSLVHHALGMPFHQIRINRTLEGKPYLNKNVNLPGFNFNTSHQGEYVGIASEPL
Sbjct: 61  VSRLLKYSLVHHALGMPFHQIRINRTLEGKPYLNKNVNLPGFNFNTSHQGEYVGIASEPL 120

Query: 121 CLVGLDIVCISKPQRETALEFINNFTSYLTDHEWNCIVTADSHDGMLTEFYRYWCLKEAF 180
           CLVGLDIVCISKPQRETALEFINNFTSYLTDHEWNCIVTADSHDGMLTEFYRYWCLKEAF
Sbjct: 121 CLVGLDIVCISKPQRETALEFINNFTSYLTDHEWNCIVTADSHDGMLTEFYRYWCLKEAF 180

Query: 181 VKATGAGVGFGLQRLEFHHMNWTNISLCIDGEEARKWMFWLFKIDEMHLASIAKGHPEDA 240
           VKATGAGVGFGLQRLEFHHMNWTNISLCIDGEEARKWMFWLFKIDEMHLASIAKGHPEDA
Sbjct: 181 VKATGAGVGFGLQRLEFHHMNWTNISLCIDGEEARKWMFWLFKIDEMHLASIAKGHPEDA 240

Query: 241 IDSFRRTLSDVVIQEGELHTAIEIPEEAFTLLTVEHLIQLHD 282
           IDSFRRTLSDVVIQEGELHTAIEIPEEAFTLLTVEHLIQLHD
Sbjct: 241 IDSFRRTLSDVVIQEGELHTAIEIPEEAFTLLTVEHLIQLHD 282



>Os11g0136500 4\'-phosphopantetheinyl transferase domain containing protein
          Length = 283

 Score =  552 bits (1423), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 267/283 (94%), Positives = 272/283 (96%), Gaps = 1/283 (0%)

Query: 1   MMEEGEKQSSGGRWRCRWLVDVGRWRPSPAEFQAAAAVLPPHDRPAIHRFVREEDRKRAL 60
           M+EE EKQSS GRWRCRWLVDVGRWRPSPAEFQAAAA+LPPHDRPAIHRFVRE+DRKRAL
Sbjct: 1   MVEEEEKQSSVGRWRCRWLVDVGRWRPSPAEFQAAAALLPPHDRPAIHRFVREDDRKRAL 60

Query: 61  VSRLLKYSLVHHALGMPFHQIRINRTLEGKPYL-NKNVNLPGFNFNTSHQGEYVGIASEP 119
           VSRLL+YSLVHHALG+PFHQIRINRTLEGKPYL NKN N PGFNFNTSHQGEYVGIASEP
Sbjct: 61  VSRLLQYSLVHHALGIPFHQIRINRTLEGKPYLQNKNANFPGFNFNTSHQGEYVGIASEP 120

Query: 120 LCLVGLDIVCISKPQRETALEFINNFTSYLTDHEWNCIVTADSHDGMLTEFYRYWCLKEA 179
           LCLVGLDIVCISKPQRETALEFINNFTSYLTDHEWNCIVTA SHDGMLTEFYRYWCLKEA
Sbjct: 121 LCLVGLDIVCISKPQRETALEFINNFTSYLTDHEWNCIVTAGSHDGMLTEFYRYWCLKEA 180

Query: 180 FVKATGAGVGFGLQRLEFHHMNWTNISLCIDGEEARKWMFWLFKIDEMHLASIAKGHPED 239
           FVKATGAGVGFGLQRLEFHHMNWTNISL IDGEE RKW FWLFKIDE HLASIAKGHPED
Sbjct: 181 FVKATGAGVGFGLQRLEFHHMNWTNISLRIDGEEDRKWRFWLFKIDEKHLASIAKGHPED 240

Query: 240 AIDSFRRTLSDVVIQEGELHTAIEIPEEAFTLLTVEHLIQLHD 282
           AIDSFRRTLSDVVIQEGELHTAIEIPEEAFTLLTVE LIQLHD
Sbjct: 241 AIDSFRRTLSDVVIQEGELHTAIEIPEEAFTLLTVEQLIQLHD 283



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.323    0.138    0.443 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 10,696,387
Number of extensions: 471703
Number of successful extensions: 1125
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 1124
Number of HSP's successfully gapped: 2
Length of query: 282
Length of database: 17,035,801
Length adjustment: 100
Effective length of query: 182
Effective length of database: 11,814,401
Effective search space: 2150220982
Effective search space used: 2150220982
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 155 (64.3 bits)