Os11g0136500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : 4'-phosphopantetheinyl transferase domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os11g0136500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : 4'-phosphopantetheinyl transferase domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 338.87 | 0.865 | 3.45 | 0.0774 | 0.282 | 1.48 | 0.651 | 2.37 | -0.366 | 8.36 | 14.29 | 634 | -- | -- |
| 339.82 | 0.859 | 3.5 | -0.287 | 0.352 | 1.3 | 0.0235 | -- | -0.481 | 6.93 | 19.51 | 573 | -- | -- |
| 339.06 | 0.858 | 3.47 | 0.0358 | 0.365 | 1.29 | -- | 1.61 | -0.379 | 5.72 | 17.88 | 465 | -- | -- |
| 339.61 | 0.858 | 3.5 | -0.279 | 0.385 | 1.32 | -- | -- | -0.483 | 6.02 | 19.4 | 478 | -- | -- |
| 342.9 | 0.862 | 3.47 | 0.0309 | -- | 1.06 | -- | 1.36 | -0.361 | -- | 17.8 | 645 | -- | -- |
| 369.13 | 0.901 | 3.46 | 0.0445 | 0.0529 | -- | 0.588 | -- | -0.25 | 16.4 | -- | -- | -- | -- |
| 369.73 | 0.9 | 3.46 | 0.0483 | 0.0982 | -- | -- | -- | -0.247 | 19.8 | -- | -- | -- | -- |
| 344.17 | 0.864 | 3.5 | -0.231 | -- | 1.06 | -- | -- | -0.434 | -- | 19 | 645 | -- | -- |
| 341.4 | 0.861 | 3.49 | -- | 0.357 | 1.22 | -- | -- | -0.436 | 5.71 | 19.7 | 445 | -- | -- |
| 370.25 | 0.899 | 3.46 | 0.0471 | -- | -- | -- | -- | -0.249 | -- | -- | -- | -- | -- |
| 369.79 | 0.9 | 3.46 | -- | 0.0978 | -- | -- | -- | -0.253 | 19.8 | -- | -- | -- | -- |
| 345.43 | 0.866 | 3.49 | -- | -- | 0.978 | -- | -- | -0.399 | -- | 19.5 | 637 | -- | -- |
| 370.31 | 0.898 | 3.46 | -- | -- | -- | -- | -- | -0.254 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 330.87 | radiation | 1.0 | 90 | > th | dose dependent | rect. | 18 | 1 |
| 11 | 333.99 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 20 | 6 |
| 12 | 334.10 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 20 | 6 |
| 13 | 334.10 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 20 | 6 |
| 17 | 336.03 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 21 | 5 |
| 39 | 337.41 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 15 | 18 |
| 40 | 337.49 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 14 | 21 |
| 41 | 337.54 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 23 | 23 |
| 42 | 337.55 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 20 | 19 |
| 46 | 337.56 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 20 | 17 |
| 47 | 337.56 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 16 | 21 |
| 69 | 337.94 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 18 | 20 |
| 106 | 338.36 | temperature | 20.0 | 14400 | < th | dose dependent | rect. | 23 | 1 |
| 115 | 338.46 | temperature | 25.0 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 119 | 338.52 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 5 | 23 |
| 124 | 338.55 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 20 | 23 |
| 135 | 338.68 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 20 | 1 |
| 146 | 338.75 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 10 | 23 |
| 152 | 338.79 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 5 | 5 |
| 161 | 338.85 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 20 | 2 |
| 178 | 338.90 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 8 | 22 |
| 205 | 339.09 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 2 | 20 |
| 239 | 339.26 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 18 | 23 |
| 244 | 339.29 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 18 | 6 |
| 245 | 339.29 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 21 | 16 |
| 260 | 339.33 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 17 | 7 |
| 264 | 339.34 | temperature | 15.0 | 720 | > th | dose dependent | no | NA | NA |
| 327 | 339.45 | radiation | 1.0 | 90 | > th | dose independent | rect. | 18 | 1 |
| 355 | 339.49 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 6 | 4 |
| 370 | 339.52 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 6 | 2 |
| 372 | 339.52 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 23 | 1 |
| 375 | 339.53 | temperature | 20.0 | 720 | > th | dose dependent | sin | 7 | NA |
| 403 | 339.58 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 20 | 2 |
| 405 | 339.58 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 8 | 1 |
| 414 | 339.60 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 8 | 1 |
| 416 | 339.60 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 6 | 4 |
| 420 | 339.61 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 2 | 1 |
| 424 | 339.61 | temperature | 20.0 | 14400 | < th | dose dependent | rect. | 16 | 13 |
| 460 | 339.69 | temperature | 20.0 | 14400 | < th | dose dependent | rect. | 20 | 9 |
| 516 | 339.79 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 18 | 15 |
| 556 | 339.86 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 23 | 20 |
| 581 | 339.89 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 2 | 23 |
| 582 | 339.90 | temperature | 20.0 | 14400 | < th | dose dependent | sin | 14 | NA |
| 594 | 339.91 | temperature | 20.0 | 4320 | > th | dose dependent | sin | 11 | NA |
| 600 | 339.92 | humidity | 70.0 | 270 | < th | dose independent | rect. | 16 | 3 |
| 635 | 339.96 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 6 | 2 |
| 644 | 339.97 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 18 | 6 |
| 671 | 340.00 | temperature | 20.0 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 706 | 340.04 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 8 | 1 |
| 721 | 340.06 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 6 | 6 |
| 741 | 340.08 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 15 | 10 |
| 748 | 340.09 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 22 | 6 |
| 752 | 340.10 | temperature | 25.0 | 4320 | < th | dose independent | sin | 16 | NA |
| 790 | 340.14 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 2 | 1 |
| 861 | 340.21 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 6 | 6 |
| 896 | 340.26 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 14 | 11 |
| 905 | 340.27 | temperature | 25.0 | 4320 | > th | dose independent | sin | 16 | NA |