BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os12g0119700 Os12g0119700|AK072581
         (241 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os12g0119700  Hypothetical protein                                454   e-128
Os12g0119200                                                      394   e-110
Os11g0119900  Hypothetical protein                                310   4e-85

>Os12g0119700 Hypothetical protein
          Length = 241

 Score =  454 bits (1167), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 227/241 (94%), Positives = 227/241 (94%)

Query: 1   MDQGVDKNVIDNSLVSNCDFPVVKKLDKCVNEEASVQSPFENKDTRSLGMVCDHENNKSG 60
           MDQGVDKNVIDNSLVSNCDFPVVKKLDKCVNEEASVQSPFENKDTRSLGMVCDHENNKSG
Sbjct: 1   MDQGVDKNVIDNSLVSNCDFPVVKKLDKCVNEEASVQSPFENKDTRSLGMVCDHENNKSG 60

Query: 61  VAEVITPPENEAIESYISKSVADEDPSYGCQTPRESIFDPFAPGPEELACAPKKKVTKAP 120
           VAEVITPPENEAIESYISKSVADEDPSYGCQTPRESIFDPFAPGPEELACAPKKKVTKAP
Sbjct: 61  VAEVITPPENEAIESYISKSVADEDPSYGCQTPRESIFDPFAPGPEELACAPKKKVTKAP 120

Query: 121 ELPSRRQLSFDSGDYPVKRLSXXXXXXXXXXXXXXRICMMFIDLIISNQALETTGKDLIG 180
           ELPSRRQLSFDSGDYPVKRLS              RICMMFIDLIISNQALETTGKDLIG
Sbjct: 121 ELPSRRQLSFDSGDYPVKRLSFEFDDAEEEDQFLERICMMFIDLIISNQALETTGKDLIG 180

Query: 181 SNSPRSCETPSSEPLLTGIADTCPDAPLRRPLKAVQLSPSICRKLDFDSVSPRCLFVKEN 240
           SNSPRSCETPSSEPLLTGIADTCPDAPLRRPLKAVQLSPSICRKLDFDSVSPRCLFVKEN
Sbjct: 181 SNSPRSCETPSSEPLLTGIADTCPDAPLRRPLKAVQLSPSICRKLDFDSVSPRCLFVKEN 240

Query: 241 K 241
           K
Sbjct: 241 K 241



>Os12g0119200 
          Length = 335

 Score =  394 bits (1011), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 203/241 (84%), Positives = 208/241 (86%), Gaps = 1/241 (0%)

Query: 1   MDQGVDKNVIDNSLVSNCDFPVVKKLDKCVNEEASVQSPFENKDTRSLGMVCDHENNKSG 60
           MDQGVDKNV DNSLVSNCDFPVVKKL+KCV+EE SVQS FENKDTRSLGMVCDHENNKSG
Sbjct: 96  MDQGVDKNVTDNSLVSNCDFPVVKKLEKCVDEEVSVQSSFENKDTRSLGMVCDHENNKSG 155

Query: 61  VAEVITPPENEAIESYISKSVADEDPSYGCQTPRESIFDPFAPGPEELACAPKKKVTKAP 120
           VAEVIT  E EAIES  S +VADEDP YGCQTPRESIFDPFAPGP+ELACAPKK V KAP
Sbjct: 156 VAEVITL-EKEAIESSSSINVADEDPLYGCQTPRESIFDPFAPGPKELACAPKKNVIKAP 214

Query: 121 ELPSRRQLSFDSGDYPVKRLSXXXXXXXXXXXXXXRICMMFIDLIISNQALETTGKDLIG 180
           ELP RRQLSFDSGDYPVKRLS              RIC MFIDLI+SNQALETTGKDLIG
Sbjct: 215 ELPPRRQLSFDSGDYPVKRLSFEFDDAEEDDQFLERICKMFIDLIVSNQALETTGKDLIG 274

Query: 181 SNSPRSCETPSSEPLLTGIADTCPDAPLRRPLKAVQLSPSICRKLDFDSVSPRCLFVKEN 240
           SNS  SCET SSEPLLT IA TCPDAPLRRPLKAVQLSPSICRKLDFDSVSPRCLFVKEN
Sbjct: 275 SNSLGSCETSSSEPLLTSIAYTCPDAPLRRPLKAVQLSPSICRKLDFDSVSPRCLFVKEN 334

Query: 241 K 241
           K
Sbjct: 335 K 335



>Os11g0119900 Hypothetical protein
          Length = 191

 Score =  310 bits (795), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 159/192 (82%), Positives = 164/192 (85%), Gaps = 1/192 (0%)

Query: 50  MVCDHENNKSGVAEVITPPENEAIESYISKSVADEDPSYGCQTPRESIFDPFAPGPEELA 109
           MV DHENNKSGVAEVI P + EAIES  S +VADEDP YGCQTPRESIFDPFAPGPEELA
Sbjct: 1   MVYDHENNKSGVAEVIRP-DKEAIESSSSMNVADEDPLYGCQTPRESIFDPFAPGPEELA 59

Query: 110 CAPKKKVTKAPELPSRRQLSFDSGDYPVKRLSXXXXXXXXXXXXXXRICMMFIDLIISNQ 169
           CAPKK + KAPELP RRQLSFDSGDYP+KRLS              RIC MFIDLI+SNQ
Sbjct: 60  CAPKKNMIKAPELPPRRQLSFDSGDYPIKRLSFEFDDAEEDDQFLERICKMFIDLIVSNQ 119

Query: 170 ALETTGKDLIGSNSPRSCETPSSEPLLTGIADTCPDAPLRRPLKAVQLSPSICRKLDFDS 229
           ALET GKDLIGSNSP SCETPSSEPLLTGIADTCPDAPLRRPLKAVQLSPSICRKLDFDS
Sbjct: 120 ALETIGKDLIGSNSPGSCETPSSEPLLTGIADTCPDAPLRRPLKAVQLSPSICRKLDFDS 179

Query: 230 VSPRCLFVKENK 241
           VSPRCLFVKENK
Sbjct: 180 VSPRCLFVKENK 191



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.314    0.132    0.389 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 8,439,601
Number of extensions: 351118
Number of successful extensions: 576
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 574
Number of HSP's successfully gapped: 3
Length of query: 241
Length of database: 17,035,801
Length adjustment: 98
Effective length of query: 143
Effective length of database: 11,918,829
Effective search space: 1704392547
Effective search space used: 1704392547
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 154 (63.9 bits)