Os12g0119700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os12g0119700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 27.19 | 0.245 | 9.55 | -0.36 | 0.178 | -0.471 | 0.293 | -0.372 | -0.0525 | 13.4 | 22.4 | 1324 | -- | -- |
| 27.55 | 0.244 | 9.56 | -0.459 | 0.192 | -0.485 | 0.197 | -- | -0.0837 | 13.3 | 22.4 | 1289 | -- | -- |
| 27.51 | 0.244 | 9.55 | -0.363 | 0.176 | -0.474 | -- | -0.334 | -0.0579 | 13 | 22.4 | 1324 | -- | -- |
| 27.74 | 0.245 | 9.56 | -0.473 | 0.18 | -0.472 | -- | -- | -0.0829 | 12.9 | 22.4 | 1286 | -- | -- |
| 28.99 | 0.251 | 9.55 | -0.37 | -- | -0.495 | -- | -0.419 | -0.0453 | -- | 22.1 | 1553 | -- | -- |
| 36.38 | 0.283 | 9.52 | -0.322 | 0.14 | -- | 0.259 | -- | 0.0793 | 13.3 | -- | -- | -- | -- |
| 36.63 | 0.283 | 9.52 | -0.313 | 0.14 | -- | -- | -- | 0.0804 | 12.7 | -- | -- | -- | -- |
| 29.42 | 0.253 | 9.56 | -0.498 | -- | -0.483 | -- | -- | -0.0818 | -- | 22.18 | 1517 | -- | -- |
| 33.28 | 0.269 | 9.54 | -- | 0.2 | -0.385 | -- | -- | -0.0075 | 12.8 | 22.4 | 1258 | -- | -- |
| 37.87 | 0.288 | 9.52 | -0.318 | -- | -- | -- | -- | 0.0778 | -- | -- | -- | -- | -- |
| 39.22 | 0.293 | 9.51 | -- | 0.145 | -- | -- | -- | 0.115 | 12.8 | -- | -- | -- | -- |
| 35.12 | 0.276 | 9.54 | -- | -- | -0.353 | -- | -- | 0.00261 | -- | 22.41 | 1484 | -- | -- |
| 40.54 | 0.297 | 9.52 | -- | -- | -- | -- | -- | 0.113 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 27.15 | temperature | 20 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 17 | 27.66 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 2 |
| 20 | 27.76 | temperature | 20 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 22 | 27.78 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 24 | 27.79 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 2 |
| 25 | 27.80 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 52 | 27.91 | temperature | 25 | 1440 | < th | dose dependent | rect. | 13 | 16 |
| 58 | 27.92 | temperature | 30 | 1440 | < th | dose dependent | rect. | 23 | 6 |
| 59 | 27.92 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 12 |
| 76 | 27.94 | temperature | 30 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 94 | 27.96 | temperature | 10 | 270 | > th | dose dependent | rect. | 3 | 22 |
| 104 | 27.98 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 9 |
| 115 | 28.00 | temperature | 25 | 1440 | < th | dose dependent | sin | 15 | NA |
| 191 | 28.08 | temperature | 30 | 90 | < th | dose dependent | rect. | 9 | 22 |
| 213 | 28.11 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 3 |
| 267 | 28.17 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 19 |
| 274 | 28.18 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 275 | 28.18 | temperature | 30 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 280 | 28.19 | temperature | 15 | 270 | > th | dose dependent | rect. | 4 | 20 |
| 293 | 28.21 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 302 | 28.23 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 312 | 28.24 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 321 | 28.24 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 341 | 28.26 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 342 | 28.27 | temperature | 20 | 4320 | < th | dose independent | rect. | 22 | 1 |
| 433 | 28.35 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 3 |
| 461 | 28.37 | temperature | 15 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 510 | 28.43 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 536 | 28.46 | temperature | 30 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 682 | 28.60 | temperature | 15 | 10 | > th | dose dependent | no | NA | NA |
| 701 | 28.62 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 8 |
| 759 | 28.66 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 22 |
| 764 | 28.67 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 771 | 28.67 | temperature | 30 | 90 | < th | dose dependent | rect. | 11 | 20 |
| 824 | 28.70 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 862 | 28.72 | temperature | 25 | 1440 | < th | dose dependent | rect. | 23 | 23 |
| 899 | 28.74 | temperature | 30 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 991 | 28.80 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 13 |