Os11g0119900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os11g0119900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 16.46 | 0.191 | 9.56 | 0.293 | 0.0655 | 0.381 | -0.158 | -0.0104 | 0.223 | 20.5 | 70 | 4440 | -- | -- |
| 16.46 | 0.189 | 9.56 | 0.293 | 0.0668 | 0.381 | -0.154 | -- | 0.224 | 20.4 | 70 | 4450 | -- | -- |
| 16.49 | 0.189 | 9.56 | 0.292 | 0.0698 | 0.378 | -- | -0.0112 | 0.229 | 19.3 | 70 | 4450 | -- | -- |
| 16.47 | 0.189 | 9.56 | 0.304 | 0.0809 | 0.377 | -- | -- | 0.222 | 18.7 | 70 | 4553 | -- | -- |
| 16.78 | 0.191 | 9.56 | 0.298 | -- | 0.387 | -- | -0.0148 | 0.222 | -- | 70.16 | 4447 | -- | -- |
| 18.61 | 0.202 | 9.58 | 0.284 | 0.0537 | -- | -0.236 | -- | 0.172 | 22 | -- | -- | -- | -- |
| 18.71 | 0.203 | 9.58 | 0.295 | 0.0745 | -- | -- | -- | 0.174 | 19.5 | -- | -- | -- | -- |
| 16.78 | 0.191 | 9.56 | 0.297 | -- | 0.384 | -- | -- | 0.223 | -- | 70.04 | 4439 | -- | -- |
| 18.49 | 0.2 | 9.56 | -- | 0.084 | 0.375 | -- | -- | 0.232 | 18.6 | 71.94 | 7451 | -- | -- |
| 19.01 | 0.204 | 9.57 | 0.294 | -- | -- | -- | -- | 0.173 | -- | -- | -- | -- | -- |
| 21 | 0.214 | 9.58 | -- | 0.0721 | -- | -- | -- | 0.141 | 19.8 | -- | -- | -- | -- |
| 18.78 | 0.202 | 9.56 | -- | -- | 0.384 | -- | -- | 0.227 | -- | 71.66 | 7218 | -- | -- |
| 21.28 | 0.215 | 9.58 | -- | -- | -- | -- | -- | 0.14 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 16.31 | humidity | 70 | 4320 | > th | dose independent | rect. | 9 | 1 |
| 2 | 16.33 | humidity | 90 | 4320 | < th | dose dependent | rect. | 18 | 1 |
| 3 | 16.34 | humidity | 70 | 4320 | > th | dose independent | rect. | 18 | 17 |
| 6 | 16.35 | humidity | 60 | 4320 | > th | dose independent | rect. | 12 | 2 |
| 9 | 16.37 | humidity | 50 | 4320 | > th | dose dependent | rect. | 18 | 1 |
| 23 | 16.42 | humidity | 70 | 4320 | > th | dose independent | rect. | 15 | 20 |
| 25 | 16.43 | humidity | 70 | 4320 | > th | dose independent | sin | 10 | NA |
| 27 | 16.43 | humidity | 70 | 4320 | < th | dose independent | rect. | 18 | 18 |
| 30 | 16.43 | humidity | 70 | 4320 | < th | dose independent | rect. | 14 | 21 |
| 32 | 16.44 | humidity | 70 | 4320 | < th | dose independent | rect. | 9 | 1 |
| 53 | 16.46 | humidity | 60 | 4320 | < th | dose independent | rect. | 13 | 1 |
| 71 | 16.48 | humidity | 70 | 4320 | > th | dose independent | rect. | 8 | 12 |
| 94 | 16.49 | humidity | 70 | 4320 | > th | dose independent | no | NA | NA |
| 95 | 16.49 | humidity | 70 | 4320 | < th | dose independent | sin | 11 | NA |
| 186 | 16.51 | humidity | 70 | 4320 | < th | dose independent | rect. | 8 | 12 |
| 212 | 16.52 | humidity | 70 | 4320 | < th | dose independent | no | NA | NA |
| 313 | 16.53 | humidity | 70 | 4320 | > th | dose independent | rect. | 24 | 11 |
| 386 | 16.56 | humidity | 70 | 4320 | < th | dose independent | sin | 5 | NA |
| 405 | 16.56 | humidity | 80 | 4320 | < th | dose dependent | rect. | 8 | 12 |
| 407 | 16.57 | humidity | 70 | 4320 | < th | dose independent | sin | 3 | NA |
| 422 | 16.57 | humidity | 80 | 4320 | < th | dose dependent | rect. | 5 | 14 |
| 429 | 16.58 | humidity | 70 | 4320 | < th | dose independent | sin | 23 | NA |
| 500 | 16.59 | humidity | 80 | 4320 | < th | dose dependent | rect. | 12 | 1 |
| 530 | 16.60 | humidity | 80 | 4320 | < th | dose dependent | sin | 21 | NA |
| 544 | 16.61 | humidity | 70 | 4320 | < th | dose independent | rect. | 15 | 5 |
| 564 | 16.61 | humidity | 80 | 4320 | < th | dose dependent | rect. | 9 | 5 |
| 706 | 16.63 | humidity | 50 | 4320 | > th | dose dependent | rect. | 6 | 16 |
| 780 | 16.64 | humidity | 80 | 4320 | < th | dose dependent | rect. | 17 | 21 |
| 827 | 16.65 | humidity | 60 | 4320 | > th | dose dependent | rect. | 8 | 4 |
| 873 | 16.66 | humidity | 70 | 4320 | > th | dose independent | rect. | 15 | 6 |
| 876 | 16.66 | humidity | 60 | 4320 | > th | dose independent | rect. | 11 | 8 |
| 905 | 16.66 | humidity | 80 | 4320 | < th | dose dependent | no | NA | NA |
| 906 | 16.66 | humidity | 90 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 909 | 16.66 | humidity | 60 | 4320 | > th | dose dependent | rect. | 6 | 6 |
| 919 | 16.66 | humidity | 50 | 4320 | > th | dose dependent | rect. | 8 | 12 |
| 947 | 16.67 | humidity | 70 | 4320 | > th | dose independent | rect. | 18 | 6 |
| 969 | 16.67 | humidity | 60 | 4320 | > th | dose dependent | rect. | 10 | 1 |
| 992 | 16.67 | humidity | 80 | 4320 | < th | dose dependent | rect. | 11 | 23 |
| 995 | 16.68 | humidity | 70 | 4320 | > th | dose independent | rect. | 18 | 2 |