BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os11g0539800 Os11g0539800|AK105673
         (460 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os11g0539800  Similar to Xaa-Pro aminopeptidase 1                 961   0.0  
Os11g0540100  Similar to Xaa-Pro aminopeptidase 2 (EC 3.4.11.9)   858   0.0  
Os07g0205700  Similar to Xaa-Pro dipeptidase (EC 3.4.-.-)         395   e-110

>Os11g0539800 Similar to Xaa-Pro aminopeptidase 1
          Length = 460

 Score =  961 bits (2485), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 460/460 (100%), Positives = 460/460 (100%)

Query: 1   HEKARGIIIAALDEVAWLYNIRGDDVHYSPVVHSYSIVTLHSAFFYVDKRKVSVEVQNYM 60
           HEKARGIIIAALDEVAWLYNIRGDDVHYSPVVHSYSIVTLHSAFFYVDKRKVSVEVQNYM
Sbjct: 1   HEKARGIIIAALDEVAWLYNIRGDDVHYSPVVHSYSIVTLHSAFFYVDKRKVSVEVQNYM 60

Query: 61  TDNGIDIKDYNMVQSDASLLASGQLKGSAVNGSSYGENDMNENSKVWIDSNSCCLALYSK 120
           TDNGIDIKDYNMVQSDASLLASGQLKGSAVNGSSYGENDMNENSKVWIDSNSCCLALYSK
Sbjct: 61  TDNGIDIKDYNMVQSDASLLASGQLKGSAVNGSSYGENDMNENSKVWIDSNSCCLALYSK 120

Query: 121 LDQDQVLMLQSPIALPKAVKNPVELDGLRKAHIRDGAAVVQYLAWLDNQMQENYGASGYF 180
           LDQDQVLMLQSPIALPKAVKNPVELDGLRKAHIRDGAAVVQYLAWLDNQMQENYGASGYF
Sbjct: 121 LDQDQVLMLQSPIALPKAVKNPVELDGLRKAHIRDGAAVVQYLAWLDNQMQENYGASGYF 180

Query: 181 SEAKGSQKKQHMEVKLTEVSVSDKLEGFRASKEHFKGLSFPTISSVGPNAAVIHYSPEAS 240
           SEAKGSQKKQHMEVKLTEVSVSDKLEGFRASKEHFKGLSFPTISSVGPNAAVIHYSPEAS
Sbjct: 181 SEAKGSQKKQHMEVKLTEVSVSDKLEGFRASKEHFKGLSFPTISSVGPNAAVIHYSPEAS 240

Query: 241 SCAELDADKIYLCDSGAQYLDGTTDITRTVHFGKPSEHEKSCYTAVLKGHIALDSAVFPN 300
           SCAELDADKIYLCDSGAQYLDGTTDITRTVHFGKPSEHEKSCYTAVLKGHIALDSAVFPN
Sbjct: 241 SCAELDADKIYLCDSGAQYLDGTTDITRTVHFGKPSEHEKSCYTAVLKGHIALDSAVFPN 300

Query: 301 GTTGHALDILARTPLWRSGLDYRHGTGHGIGSYLNVHEGPHLISFRPSARNIPLQASMTV 360
           GTTGHALDILARTPLWRSGLDYRHGTGHGIGSYLNVHEGPHLISFRPSARNIPLQASMTV
Sbjct: 301 GTTGHALDILARTPLWRSGLDYRHGTGHGIGSYLNVHEGPHLISFRPSARNIPLQASMTV 360

Query: 361 TDEPGYYEDGSFGIRLENVLIVKEANTKYNFGDKGYLAFEHITWAPYQTKLIDTTLLTPA 420
           TDEPGYYEDGSFGIRLENVLIVKEANTKYNFGDKGYLAFEHITWAPYQTKLIDTTLLTPA
Sbjct: 361 TDEPGYYEDGSFGIRLENVLIVKEANTKYNFGDKGYLAFEHITWAPYQTKLIDTTLLTPA 420

Query: 421 EIEWVNAYHADCRKILQPYLNEQEKEWLRKATEPIAVSCC 460
           EIEWVNAYHADCRKILQPYLNEQEKEWLRKATEPIAVSCC
Sbjct: 421 EIEWVNAYHADCRKILQPYLNEQEKEWLRKATEPIAVSCC 460



>Os11g0540100 Similar to Xaa-Pro aminopeptidase 2 (EC 3.4.11.9)
          Length = 644

 Score =  858 bits (2216), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 407/459 (88%), Positives = 436/459 (94%), Gaps = 3/459 (0%)

Query: 1   HEKARGIIIAALDEVAWLYNIRGDDVHYSPVVHSYSIVTLHSAFFYVDKRKVSVEVQNYM 60
           HEKARGIIIAALDEVAWLYNIRG+DVHYSPVVHSYSIVTLHSAFFYVD RKVSVE  +YM
Sbjct: 189 HEKARGIIIAALDEVAWLYNIRGNDVHYSPVVHSYSIVTLHSAFFYVDNRKVSVE--SYM 246

Query: 61  TDNGIDIKDYNMVQSDASLLASGQLKGSAVNGSSYGENDMNENSKVWIDSNSCCLALYSK 120
           ++NGIDI+DYNMVQSD SLLASGQLKGSAVNGSS+  N MN+NSK+ ID NSCCLALYSK
Sbjct: 247 SENGIDIRDYNMVQSDVSLLASGQLKGSAVNGSSHEGNGMNDNSKILID-NSCCLALYSK 305

Query: 121 LDQDQVLMLQSPIALPKAVKNPVELDGLRKAHIRDGAAVVQYLAWLDNQMQENYGASGYF 180
           LD+DQVL+LQSP+AL KAVKNPVELDGLRKAHIRDG AVVQYLAWLDNQMQENYGASGYF
Sbjct: 306 LDEDQVLILQSPVALSKAVKNPVELDGLRKAHIRDGVAVVQYLAWLDNQMQENYGASGYF 365

Query: 181 SEAKGSQKKQHMEVKLTEVSVSDKLEGFRASKEHFKGLSFPTISSVGPNAAVIHYSPEAS 240
           S AKGSQKK+H+EVKLTEVSVSDKLEGFRA+KE+FKG SFP IS+VGPNA ++HYSPEAS
Sbjct: 366 SGAKGSQKKEHVEVKLTEVSVSDKLEGFRAAKEYFKGPSFPMISAVGPNATILHYSPEAS 425

Query: 241 SCAELDADKIYLCDSGAQYLDGTTDITRTVHFGKPSEHEKSCYTAVLKGHIALDSAVFPN 300
           SCAELD DKIYL D+GAQYLDGTTDITRTVHFGKPSEHEKSCYTAVLKGHIALD+AVFPN
Sbjct: 426 SCAELDTDKIYLFDTGAQYLDGTTDITRTVHFGKPSEHEKSCYTAVLKGHIALDTAVFPN 485

Query: 301 GTTGHALDILARTPLWRSGLDYRHGTGHGIGSYLNVHEGPHLISFRPSARNIPLQASMTV 360
           GTTGHALDILARTPLW+SGLDYRHGTGHG+GSYL VHEGPH ISFRPSARN+PLQASMTV
Sbjct: 486 GTTGHALDILARTPLWKSGLDYRHGTGHGVGSYLTVHEGPHQISFRPSARNVPLQASMTV 545

Query: 361 TDEPGYYEDGSFGIRLENVLIVKEANTKYNFGDKGYLAFEHITWAPYQTKLIDTTLLTPA 420
           TDEPGYY+DGSFGIRLENVLIV++ANTK+NFGDKGYLAFEHITWAPYQTKLID TLL PA
Sbjct: 546 TDEPGYYQDGSFGIRLENVLIVQDANTKFNFGDKGYLAFEHITWAPYQTKLIDATLLAPA 605

Query: 421 EIEWVNAYHADCRKILQPYLNEQEKEWLRKATEPIAVSC 459
           EIEWVN YH+DCR+ILQPYLNEQEKEWLRKATEPI VSC
Sbjct: 606 EIEWVNTYHSDCRRILQPYLNEQEKEWLRKATEPITVSC 644



>Os07g0205700 Similar to Xaa-Pro dipeptidase (EC 3.4.-.-)
          Length = 718

 Score =  395 bits (1014), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 207/466 (44%), Positives = 284/466 (60%), Gaps = 38/466 (8%)

Query: 7   IIIAALDEVAWLYNIRGDDVHYSPVVHSYSIVTLHSAFFYVDKRKVSVEVQNYMTDNGID 66
           ++I+ LDEVAWL N+RG DV  SPV +SY IV   +A  +VD  KVS +V  ++   G+ 
Sbjct: 274 VVISLLDEVAWLLNMRGSDVPNSPVFYSYLIVEDTAATLFVDNNKVSEDVLEHLEKAGVK 333

Query: 67  IKDYNMVQSDASLLASGQ----LKGSAVNGS----------SYGENDMNENSKVWIDSNS 112
           +K Y  + SD   LA       L  S++N +           Y +       ++  +S+ 
Sbjct: 334 LKPYEAILSDVERLAENGAKLWLDSSSINAAIVNVFRSSCERYVKKRGKAGRQIGKESSQ 393

Query: 113 CCLALYSKLDQD---QVLMLQSPIALPKAVKNPVELDGLRKAHIRDGAAVVQYLAWLDNQ 169
              A  S   Q+     L   SP  L KAVKN  E++G++ +H+RD AA+ ++  WL+ Q
Sbjct: 394 GDPATGSSGVQNGTVNALYKVSPATLAKAVKNEAEVEGMKSSHLRDAAALAEFWCWLEGQ 453

Query: 170 MQENYGASGYFSEAKGSQKKQHMEVKLTEVSVSDKLEGFRASKEHFKGLSFPTISSVGPN 229
           ++E+                    V LTEV V++KL  FR  ++ F   SF TIS  G N
Sbjct: 454 VRES--------------------VPLTEVQVAEKLLEFRQKQDGFIDTSFDTISGYGAN 493

Query: 230 AAVIHYSPEASSCAELDADKIYLCDSGAQYLDGTTDITRTVHFGKPSEHEKSCYTAVLKG 289
            A+IHY P   SC+ + +D ++L DSGAQY+DGTTDITRTVHFG+P+  +K C+T VL+G
Sbjct: 494 GAIIHYRPTPESCSSVGSDNLFLLDSGAQYIDGTTDITRTVHFGEPTPRQKECFTRVLQG 553

Query: 290 HIALDSAVFPNGTTGHALDILARTPLWRSGLDYRHGTGHGIGSYLNVHEGPHLISFRPSA 349
           HIALD AVFP  T G  LD+LAR+ LW+ GLDYRHGTGHG+G+ LNVHEGP  IS+R   
Sbjct: 554 HIALDQAVFPERTPGFVLDVLARSSLWKIGLDYRHGTGHGVGAALNVHEGPQSISYR-YG 612

Query: 350 RNIPLQASMTVTDEPGYYEDGSFGIRLENVLIVKEANTKYNFGDKGYLAFEHITWAPYQT 409
               LQ  M V++EPGYYED SFGIR+EN+L+VKE N   +FG   YL FE +T+ P Q+
Sbjct: 613 NLTALQKGMIVSNEPGYYEDNSFGIRIENLLLVKEVNLPNSFGGVSYLGFEKLTFVPIQS 672

Query: 410 KLIDTTLLTPAEIEWVNAYHADCRKILQPYLNEQEKEWLRKATEPI 455
           KL+D +LL+P+EI W+N YH +  + + P L+    +WLRK T P+
Sbjct: 673 KLVDLSLLSPSEINWINEYHDEVWEKVSPLLSGHSLDWLRKNTRPL 718



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.316    0.133    0.398 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 16,196,184
Number of extensions: 696122
Number of successful extensions: 1650
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 1646
Number of HSP's successfully gapped: 3
Length of query: 460
Length of database: 17,035,801
Length adjustment: 104
Effective length of query: 356
Effective length of database: 11,605,545
Effective search space: 4131574020
Effective search space used: 4131574020
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 158 (65.5 bits)