BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0456100 Os11g0456100|AK099562
(351 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os11g0456100 Protein of unknown function DUF760 family protein 677 0.0
Os03g0717900 Similar to ABRH7 (Fragment) 160 1e-39
Os04g0595100 Protein of unknown function DUF760 family protein 148 6e-36
>Os11g0456100 Protein of unknown function DUF760 family protein
Length = 351
Score = 677 bits (1747), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/351 (94%), Positives = 330/351 (94%)
Query: 1 MLNWKSKCSTRSPRTTVAGAKPDDSEFESVNAPLEPQTWEGSFLCGLLKNQPQVLPVAAA 60
MLNWKSKCSTRSPRTTVAGAKPDDSEFESVNAPLEPQTWEGSFLCGLLKNQPQVLPVAAA
Sbjct: 1 MLNWKSKCSTRSPRTTVAGAKPDDSEFESVNAPLEPQTWEGSFLCGLLKNQPQVLPVAAA 60
Query: 61 KQLQELSNQRKDTLIRWEHSIGSPEDCLHRRIAEMKEHECQTAIEDIMYTLIVYKFFKIE 120
KQLQELSNQRKDTLIRWEHSIGSPEDCLHRRIAEMKEHECQTAIEDIMYTLIVYKFFKIE
Sbjct: 61 KQLQELSNQRKDTLIRWEHSIGSPEDCLHRRIAEMKEHECQTAIEDIMYTLIVYKFFKIE 120
Query: 121 VPLVPNLSKLISNKRLQIWPPREAELESIHGPEVLGLIREHLTSIIRWVHRNGPKINRST 180
VPLVPNLSKLISNKRLQIWPPREAELESIHGPEVLGLIREHLTSIIRWVHRNGPKINRST
Sbjct: 121 VPLVPNLSKLISNKRLQIWPPREAELESIHGPEVLGLIREHLTSIIRWVHRNGPKINRST 180
Query: 181 LRIKRMQFSRIYSASIMYGYFLKSVTTRHRLELILAQSQEFCPPIQFLNAQFNSTQKXXX 240
LRIKRMQFSRIYSASIMYGYFLKSVTTRHRLELILAQSQEFCPPIQFLNAQFNSTQK
Sbjct: 181 LRIKRMQFSRIYSASIMYGYFLKSVTTRHRLELILAQSQEFCPPIQFLNAQFNSTQKQEQ 240
Query: 241 XXXXXXXXXXXXXXXXXXVVDLHDLKSYMMGFDPKTLELCARLRSCEASNLIEKHSWALF 300
VVDLHDLKSYMMGFDPKTLELCARLRSCEASNLIEKHSWALF
Sbjct: 241 EESIGGSAEISSSSKPSSVVDLHDLKSYMMGFDPKTLELCARLRSCEASNLIEKHSWALF 300
Query: 301 RESMKDFLEPDEAVILDPSSLKRLLLEAIAFGSFLWDVEDYVDEIYKLHDS 351
RESMKDFLEPDEAVILDPSSLKRLLLEAIAFGSFLWDVEDYVDEIYKLHDS
Sbjct: 301 RESMKDFLEPDEAVILDPSSLKRLLLEAIAFGSFLWDVEDYVDEIYKLHDS 351
>Os03g0717900 Similar to ABRH7 (Fragment)
Length = 455
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 114/334 (34%), Positives = 172/334 (51%), Gaps = 26/334 (7%)
Query: 32 APLEPQTWEGSFLCGLLKNQPQVLPVAAAKQLQELSNQRKDTLIRWEHSIGSPED---CL 88
APL+ ++ G FL +L P +LP AA +QL++L R D +P D L
Sbjct: 124 APLQMESPVGQFLSQILATHPHLLPAAAEQQLEQLQTDR-DAAKDNGGDKPAPSDGDIVL 182
Query: 89 HRRIAEMKEHECQTAIEDIMYTLIVYKFFKIEVPLVPNLSKLISNK-RLQIWPPR-EAEL 146
+RRIAE+KE E + A+E+I+Y L+V KF + V LVP LS IS+ R+ W E +L
Sbjct: 183 YRRIAEVKEKERKRALEEILYALVVQKFVEAGVSLVPALSHSISSSGRVDQWAESVEGKL 242
Query: 147 ESIHGPEVLGLIREHLTSIIRWVHRNGPKINRSTLRIKRMQFSRIYSASIMYGYFLKSVT 206
E +H E +I HL I+ + + + I +++ ++Y+AS+MYGYFLK V
Sbjct: 243 EKMHSQEAYEMIENHLALIL-----GQRQADATVAAISKLRVGQVYAASVMYGYFLKRVD 297
Query: 207 TRHRLELIL------AQSQEFCPPIQFLNAQFNSTQKXXXXXXXXXXXXXXXXXXXXXVV 260
R +LE + ++ ++ + +++ + V
Sbjct: 298 QRFQLEKSMKTLPWGSEEEDKLNQVMTTDSRPSPQTSTSHPEMASWTSPNFSAGGPSQSV 357
Query: 261 DLHDLKSYMMGFDPKTLELCARLRSCEASNLIEKHSWALFR--------ESMKDFLEPDE 312
L+SY+M FD +TL+ A +RS EA +IEKH+ ALF E D + DE
Sbjct: 358 KPCRLRSYVMSFDSETLQSYATIRSKEAFGIIEKHTEALFGKPEIVITPEGTVDSSK-DE 416
Query: 313 AVILDPSSLKRLLLEAIAFGSFLWDVEDYVDEIY 346
V + + L+RL+LEA+ FGSFLWDVE +VD Y
Sbjct: 417 HVRISFAGLRRLILEAVTFGSFLWDVESFVDTRY 450
>Os04g0595100 Protein of unknown function DUF760 family protein
Length = 405
Score = 148 bits (373), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 116/371 (31%), Positives = 179/371 (48%), Gaps = 52/371 (14%)
Query: 6 SKCSTRSPRTTVAGAKPDDSEFESVNAPLEPQTWEGSFLCGLLKNQPQVLPVAAAKQLQE 65
+ C RS + AK D + + APL +T G L +L++ P +LP +QL+
Sbjct: 62 NSCRARSLKVK---AKMDSGDGLTRLAPLMFETPSGQLLVQILQSHPHLLPATVDQQLEN 118
Query: 66 LSNQRKDTLIRWEHSIGSPEDCLHRRIAEMKEHECQTAIEDIMYTLIVYKFFKIEVPLVP 125
L +++ + + + P+D L++RIAE+KE E Q +E+I+Y I+YKF + ++ + P
Sbjct: 119 LQSEKD---AQEKEASKVPQDLLYKRIAEVKEKERQNTLEEIIYCWIIYKFMENDISMTP 175
Query: 126 NLSKLISNKR-LQIWPPREAELESIHGPEVLGLIREHLTSIIRWVHRNGPKINR---STL 181
L+ L R + P +E L+SIH P+ L +I+ HL I+ G K+ + +
Sbjct: 176 ALAPLGGPVRDISSLPNQEDRLQSIHSPDALEMIQNHLNLIM------GEKVAAPLDTVV 229
Query: 182 RIKRMQFSRIYSASIMYGYFLKSVTTRHRLELILAQSQEFCPPIQFLNAQFNSTQKXXXX 241
I + ++Y+ASIMYGYFLK V R +LE ++ + PP N + +
Sbjct: 230 EISNLNLGKLYAASIMYGYFLKRVDERFQLE----KNMKTLPP----NPKQQIVLENLKP 281
Query: 242 XXXXXXXXXXXXXXXXXVVDLHD-------LKSYMMGFDPKTLELCARLRSCEASNLIEK 294
+DL D L+SY+ D TL+ A +RS EA +LIEK
Sbjct: 282 NPFWDMESLVQITPDGEEIDLDDEESNPNKLRSYVSRLDADTLQRYATIRSKEAVSLIEK 341
Query: 295 HSWALFRESMKDFLEPDEAVILDPS--------------SLKRLLLEAIAFGSFLWDVED 340
+ ALF PD V+ D S L L+LEA AFGSFLW+ E
Sbjct: 342 QTQALFGR-------PDIKVLDDGSVNAKDGQMITITFIELTHLVLEAAAFGSFLWEAES 394
Query: 341 YVDEIYKLHDS 351
+V+ Y +S
Sbjct: 395 HVESKYHFVNS 405
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.321 0.135 0.409
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 11,506,312
Number of extensions: 429084
Number of successful extensions: 934
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 926
Number of HSP's successfully gapped: 4
Length of query: 351
Length of database: 17,035,801
Length adjustment: 102
Effective length of query: 249
Effective length of database: 11,709,973
Effective search space: 2915783277
Effective search space used: 2915783277
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 156 (64.7 bits)