Os11g0456100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF760 family protein.
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Os11g0456100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF760 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 63.53 | 0.374 | 12.1 | -1.84 | 0.901 | 1.46 | 0.0322 | -0.883 | -0.646 | 4.81 | 14.98 | 587 | -- | -- |
| 64.08 | 0.373 | 12.1 | -1.69 | 0.899 | 1.45 | 0.148 | -- | -0.608 | 4.79 | 14.84 | 588 | -- | -- |
| 63.53 | 0.371 | 12.1 | -1.83 | 0.904 | 1.47 | -- | -0.891 | -0.646 | 4.8 | 14.9 | 584 | -- | -- |
| 64.14 | 0.373 | 12.1 | -1.68 | 0.903 | 1.46 | -- | -- | -0.605 | 4.8 | 14.75 | 588 | -- | -- |
| 81.85 | 0.421 | 12.1 | -1.87 | -- | 1.37 | -- | -0.758 | -0.648 | -- | 12.04 | 1151 | -- | -- |
| 89.59 | 0.444 | 12.1 | -1.34 | 0.652 | -- | -0.148 | -- | -0.384 | 3.37 | -- | -- | -- | -- |
| 89.66 | 0.443 | 12.1 | -1.33 | 0.651 | -- | -- | -- | -0.383 | 3.37 | -- | -- | -- | -- |
| 82.33 | 0.423 | 12.1 | -1.72 | -- | 1.36 | -- | -- | -0.606 | -- | 13.59 | 1157 | -- | -- |
| 130.12 | 0.531 | 12.1 | -- | 0.79 | 0.722 | -- | -- | -0.322 | 3.98 | 13.76 | 412 | -- | -- |
| 113.53 | 0.498 | 12.1 | -1.31 | -- | -- | -- | -- | -0.365 | -- | -- | -- | -- | -- |
| 136.55 | 0.547 | 12 | -- | 0.625 | -- | -- | -- | -0.234 | 3.38 | -- | -- | -- | -- |
| 150.28 | 0.571 | 12.1 | -- | -- | 0.657 | -- | -- | -0.314 | -- | 11.08 | 1121 | -- | -- |
| 158.54 | 0.588 | 12 | -- | -- | -- | -- | -- | -0.221 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 62.80 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 19 |
| 2 | 62.88 | temperature | 15 | 720 | > th | dose dependent | rect. | 21 | 21 |
| 8 | 63.32 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 18 | 63.49 | temperature | 15 | 720 | > th | dose dependent | rect. | 15 | 20 |
| 64 | 64.19 | temperature | 15 | 720 | > th | dose dependent | no | NA | NA |
| 71 | 64.25 | temperature | 10 | 720 | > th | dose dependent | rect. | 10 | 23 |
| 81 | 64.34 | temperature | 15 | 720 | > th | dose dependent | rect. | 19 | 16 |
| 98 | 64.54 | temperature | 10 | 720 | > th | dose dependent | rect. | 6 | 23 |
| 105 | 64.57 | temperature | 10 | 720 | > th | dose dependent | rect. | 4 | 23 |
| 119 | 64.66 | temperature | 15 | 720 | > th | dose dependent | rect. | 21 | 14 |
| 123 | 64.68 | temperature | 15 | 720 | > th | dose dependent | rect. | 8 | 23 |
| 183 | 65.04 | temperature | 15 | 720 | > th | dose dependent | sin | 7 | NA |
| 196 | 65.10 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 19 |
| 412 | 65.97 | wind | 9 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 465 | 66.29 | wind | 9 | 43200 | > th | dose dependent | rect. | 17 | 14 |
| 468 | 66.30 | wind | 9 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 491 | 66.39 | temperature | 30 | 720 | < th | dose dependent | rect. | 22 | 21 |
| 516 | 66.48 | wind | 9 | 43200 | > th | dose dependent | rect. | 17 | 7 |
| 521 | 66.48 | temperature | 30 | 720 | < th | dose dependent | rect. | 22 | 23 |
| 532 | 66.54 | wind | 9 | 43200 | > th | dose dependent | rect. | 17 | 10 |
| 535 | 66.57 | temperature | 30 | 720 | < th | dose dependent | sin | 9 | NA |
| 540 | 66.58 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 23 |
| 580 | 66.70 | wind | 7 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 600 | 66.81 | wind | 9 | 43200 | > th | dose dependent | rect. | 17 | 4 |
| 604 | 66.83 | temperature | 25 | 4320 | < th | dose independent | rect. | 13 | 19 |
| 620 | 66.89 | temperature | 25 | 4320 | > th | dose independent | rect. | 13 | 19 |
| 626 | 66.91 | temperature | 30 | 720 | < th | dose dependent | no | NA | NA |
| 700 | 67.11 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 706 | 67.13 | temperature | 20 | 1440 | > th | dose dependent | sin | 15 | NA |
| 718 | 67.15 | wind | 9 | 43200 | > th | dose dependent | rect. | 20 | 4 |
| 840 | 67.25 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 4 |
| 872 | 67.26 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 873 | 67.26 | wind | 9 | 43200 | > th | dose dependent | rect. | 20 | 7 |