BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0456100 Os11g0456100|AK099562
(351 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G07310.1 | chr3:2328057-2329677 REVERSE LENGTH=369 253 1e-67
AT5G48590.1 | chr5:19698476-19699771 FORWARD LENGTH=345 230 1e-60
AT1G48450.1 | chr1:17908746-17910345 REVERSE LENGTH=424 166 1e-41
AT3G17800.2 | chr3:6091248-6092873 REVERSE LENGTH=428 159 3e-39
AT1G32160.1 | chr1:11568701-11570241 FORWARD LENGTH=407 146 2e-35
>AT3G07310.1 | chr3:2328057-2329677 REVERSE LENGTH=369
Length = 368
Score = 253 bits (645), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 145/344 (42%), Positives = 206/344 (59%), Gaps = 31/344 (9%)
Query: 12 SPRTTVAGAKPDDSE-FESVNAPLEPQTWEGSFLCGLLKNQPQVLPVAAAKQLQELSNQR 70
S VA A E S+NAPLEP++ +G FL +L N+ Q+ AAA +L++L++ R
Sbjct: 40 SSMVVVAAAGQSRCEPGSSLNAPLEPRSAQGRFLRSVLLNKRQLFHYAAADELKQLADDR 99
Query: 71 KDTLIRWEHSIGSPEDCLHRRIAEMKEHECQTAIEDIMYTLIVYKFFKIEVPLVPNLSKL 130
+ L R S GS E LHRRIAE+KE C+TA++DIMY LI YK+ +I VPLVP LS+
Sbjct: 100 EAALARMSLSSGSDEASLHRRIAELKERYCKTAVQDIMYMLIFYKYSEIRVPLVPKLSRC 159
Query: 131 ISNKRLQIWPPREAELESIHGPEVLGLIREHLTSIIRWVHRNGPKINRSTLRIKRMQFSR 190
I N RL+IWP ++ ELESI+ + L +I+EH++++I + N +T +I+++ +
Sbjct: 160 IYNGRLEIWPSKDWELESIYSCDTLEIIKEHVSAVIGLRVNSCVTDNWATTQIQKLHLRK 219
Query: 191 IYSASIMYGYFLKSVTTRHRLELILAQ---SQEFCPPIQFLNAQFNSTQKXXXXXXXXXX 247
+Y+ASI+YGYFLKS + RH+LE L+ S PI + + Q
Sbjct: 220 VYAASILYGYFLKSASLRHQLECSLSDIHGSGYLKSPIFGCSFTTGTAQ----------- 268
Query: 248 XXXXXXXXXXXVVDLHDLKSYMMGFDPKTLELCARLRSCEASNLIEKHSWALFRESMKDF 307
+ + L+ Y+ FDP+TL+ CA+ R+ EA NLIEK S ALF
Sbjct: 269 -----------ISNKQQLRHYISDFDPETLQRCAKPRTEEARNLIEKQSLALFGTE---- 313
Query: 308 LEPDEAVILDPSSLKRLLLEAIAFGSFLWDVEDYVDEIYKLHDS 351
E DE ++ SSLKRL+LEA+AFG+FLWD E YVD YKL ++
Sbjct: 314 -ESDETIVTSFSSLKRLVLEAVAFGTFLWDTELYVDGAYKLKEN 356
>AT5G48590.1 | chr5:19698476-19699771 FORWARD LENGTH=345
Length = 344
Score = 230 bits (586), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 137/326 (42%), Positives = 190/326 (58%), Gaps = 47/326 (14%)
Query: 25 SEFESVNAPLEPQTWEGSFLCGLLKNQPQVLPVAAAKQLQELSNQRKDTLIRWEHSIGSP 84
S +S++APL P++ +G FL +L + Q+ A A L++L++ ++ +L R S GS
Sbjct: 50 SSGQSIDAPLVPRSPQGRFLSSVLVKKRQLFHFAVADLLKQLADDKEASLSRMFLSYGSD 109
Query: 85 EDCLHRRIAEMKEHECQTAIEDIMYTLIVYKFFKIEVPLVPNLSKLISNKRLQIWPPREA 144
E LHRRIA++KE +CQ AIEDIMY LI+YKF +I VPLVP L I N RL+I P ++
Sbjct: 110 EASLHRRIAQLKESDCQIAIEDIMYMLILYKFSEIRVPLVPKLPSCIYNGRLEISPSKDW 169
Query: 145 ELESIHGPEVLGLIREHLTSIIRWVHRNGPKINRSTLRIKRMQFSRIYSASIMYGYFLKS 204
ELESIH +VL LI+EH ++I + + +T I + + S++Y+AS++YGYFLKS
Sbjct: 170 ELESIHSFDVLELIKEHSNAVISLRVNSSLTDDCATTEIDKNRLSKVYTASVLYGYFLKS 229
Query: 205 VTTRHRLELILAQSQEFCPPIQFLNAQFNSTQKXXXXXXXXXXXXXXXXXXXXXVVDLHD 264
+ RH+LE L+Q + F
Sbjct: 230 ASLRHQLECSLSQH----------HGSFTK-----------------------------Q 250
Query: 265 LKSYMMGFDPKTLELCARLRSCEASNLIEKHSWALF--RESMKDFLEPDEAVILDPSSLK 322
L+ Y+ FDPK L CA+ RS EA +LIEK S ALF ES K E+++ SSLK
Sbjct: 251 LRHYISEFDPKILRRCAKPRSHEAKSLIEKQSLALFGPEESSK------ESIVTSFSSLK 304
Query: 323 RLLLEAIAFGSFLWDVEDYVDEIYKL 348
RLLLEA+AFG+FLWD E+YVD +KL
Sbjct: 305 RLLLEAVAFGTFLWDTEEYVDGAFKL 330
>AT1G48450.1 | chr1:17908746-17910345 REVERSE LENGTH=424
Length = 423
Score = 166 bits (421), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 115/355 (32%), Positives = 183/355 (51%), Gaps = 31/355 (8%)
Query: 17 VAGAKPDDSEFESVNAPLEPQTWEGSFLCGLLKNQPQVLPVAAAKQLQELSNQR-KDTLI 75
V + D+ ES+ APL+ ++ G FL +L + P ++P A +QL++L R +
Sbjct: 70 VKASASGDASTESI-APLQLKSPVGQFLSQILVSHPHLVPAAVEQQLEQLQIDRDAEEQS 128
Query: 76 RWEHSIGSPEDCLHRRIAEMKEHECQTAIEDIMYTLIVYKFFKIEVPLVPNLSKLISN-- 133
+ S+ + L+RRIAE+KE E + A+E+I+Y L+V KF V LVP+++ ++
Sbjct: 129 KDASSVLGTDIVLYRRIAEVKEKERRRALEEILYALVVQKFMDANVTLVPSITSSSADPS 188
Query: 134 KRLQIWPPREAELESIHGPEVLGLIREHLTSIIRWVHRNGPKINRSTLRIKRMQFSRIYS 193
R+ WP + ELE +H PEV +I+ HL+ I+ +N + +I ++ ++Y+
Sbjct: 189 GRVDTWPTLDGELERLHSPEVYEMIQNHLSIIL----KNRTDDLTAVAQISKLGVGQVYA 244
Query: 194 ASIMYGYFLKSVTTRHRLE----LILAQSQEFCPPIQFLN--------AQFNSTQKXXXX 241
AS+MYGYFLK + R +LE ++ S E I+ + T +
Sbjct: 245 ASVMYGYFLKRIDQRFQLEKTMRILPGGSDEGETSIEQAGRDVERNFYEEAEETYQAVSS 304
Query: 242 XXXXXXXXXXXXXXXXXVVDLHD--LKSYMMGFDPKTLELCARLRSCEASNLIEKHSWAL 299
D+ LK+Y+M FD +TL+ A +RS E+ +IEKH+ AL
Sbjct: 305 NQDVGSFVGGINASGGFSSDMKQSRLKTYVMSFDGETLQRYATIRSRESVGIIEKHTEAL 364
Query: 300 FRESMKDFLEP--------DEAVILDPSSLKRLLLEAIAFGSFLWDVEDYVDEIY 346
F + + P DE + + LKRL+LEA+ FGSFLWDVE +VD Y
Sbjct: 365 FGRP-EIVITPQGTIDSSKDEHIKISFKGLKRLVLEAVTFGSFLWDVESHVDSRY 418
>AT3G17800.2 | chr3:6091248-6092873 REVERSE LENGTH=428
Length = 427
Score = 159 bits (401), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 107/332 (32%), Positives = 167/332 (50%), Gaps = 25/332 (7%)
Query: 32 APLEPQTWEGSFLCGLLKNQPQVLPVAAAKQLQELSNQRKDTLIRWEHSIGSP--EDCLH 89
APL+ Q+ G FL +L + P ++P A +QL++L R D+ + + S P + L+
Sbjct: 99 APLQLQSPAGQFLSQILVSHPHLVPAAVEQQLEQLQTDR-DSQGQNKDSASVPGTDIVLY 157
Query: 90 RRIAEMKEHECQTAIEDIMYTLIVYKFFKIE-VPLVPNLSKLISNKRLQIWPPREAELES 148
RRIAE+KE+E + +E+I+Y L+V KF + + + R+ WP + +LE
Sbjct: 158 RRIAELKENERRRTLEEILYALVVQKFMEANVSLVPSVSPSSDPSGRVDTWPTKVEKLER 217
Query: 149 IHGPEVLGLIREHLTSIIRWVHRNGPKIN--RSTLRIKRMQFSRIYSASIMYGYFLKSVT 206
+H PE+ +I HL I+ G ++ S +I +++ ++Y+AS+MYGYFLK V
Sbjct: 218 LHSPEMYEMIHNHLALIL------GSRMGDLNSVAQISKLRVGQVYAASVMYGYFLKRVD 271
Query: 207 TRHRLE----LILAQSQEFCPPIQFLNAQFNSTQKXXXXXXXXXXXXXXXXXXXXXVVDL 262
R +LE ++ S E ++ +
Sbjct: 272 QRFQLEKTMKILPGGSDESKTSVEQAEGTATYQAAVSSHPEVGAFAGGVSAKGFGSEIKP 331
Query: 263 HDLKSYMMGFDPKTLELCARLRSCEASNLIEKHSWALFR--------ESMKDFLEPDEAV 314
L+SY+M FD +TL+ A +RS EA +IEKH+ ALF E D DE +
Sbjct: 332 SRLRSYVMSFDAETLQRYATIRSREAVGIIEKHTEALFGKPEIVITPEGTVDS-SKDEQI 390
Query: 315 ILDPSSLKRLLLEAIAFGSFLWDVEDYVDEIY 346
+ +KRL+LEA+ FGSFLWDVE +VD Y
Sbjct: 391 KISFGGMKRLVLEAVTFGSFLWDVESHVDARY 422
>AT1G32160.1 | chr1:11568701-11570241 FORWARD LENGTH=407
Length = 406
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 105/363 (28%), Positives = 180/363 (49%), Gaps = 54/363 (14%)
Query: 15 TTVAGAKPDDSEFESVNAPLEPQTWEGSFLCGLLKNQPQVLPVAAAKQLQELSNQRKDTL 74
T A D +E + AP+E ++ G L +L+ P +LPV +QL++ + + +
Sbjct: 62 TVRASGDEDSNENFAPLAPVELESPVGQLLEQILRTHPHLLPVTVDEQLEKFAAESESR- 120
Query: 75 IRWEHSIGSPEDCLHRRIAEMKEHECQTAIEDIMYTLIVYKFFKIEVPLVPNLSKLISN- 133
+ S +D L +RI+E+++ E + + +I+Y L+V++F + + ++P + K S+
Sbjct: 121 ---KADSSSTQDILQKRISEVRDKERRKTLAEIIYCLVVHRFVEKGISMIPRI-KPTSDP 176
Query: 134 -KRLQIWPPREAELESIHGPEVLGLIREHLTSIIRWVHRNGPKIN--RSTLRIKRMQFSR 190
R+ +WP +E +LE IH + +I+ HL+S++ +GP + S ++I +++ +
Sbjct: 177 AGRIDLWPNQEEKLEVIHSADAFEMIQSHLSSVLG----DGPAVGPLSSIVQIGKIKLGK 232
Query: 191 IYSASIMYGYFLKSVTTRHRLELIL-----------AQSQEFCPP---------IQFLNA 230
+Y+AS MYGYFL+ V R++LE + + +E PP I+
Sbjct: 233 LYAASAMYGYFLRRVDQRYQLERTMNTLPKRPEKTRERFEEPSPPYPLWDPDSLIRIQPE 292
Query: 231 QFNSTQKXXXXXXXXXXXXXXXXXXXXXVVDLHDLKSYMMGFDPKTLELCARLRSCEASN 290
+++ + + L+SY+ D TL+ A +RS EA
Sbjct: 293 EYDPDEYAIQRNEDESSS--------------YGLRSYVTYLDSDTLQRYATIRSKEAMT 338
Query: 291 LIEKHSWALFRESMKDFLEP-------DEAVILDPSSLKRLLLEAIAFGSFLWDVEDYVD 343
LIEK + ALF LE DE + L S L L+LEA+AFGSFLWD E YV+
Sbjct: 339 LIEKQTQALFGRPDIRILEDGKLDTSNDEVLSLSVSGLAMLVLEAVAFGSFLWDSESYVE 398
Query: 344 EIY 346
Y
Sbjct: 399 SKY 401
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.321 0.135 0.409
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,446,815
Number of extensions: 285648
Number of successful extensions: 675
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 660
Number of HSP's successfully gapped: 10
Length of query: 351
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 251
Effective length of database: 8,364,969
Effective search space: 2099607219
Effective search space used: 2099607219
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 112 (47.8 bits)