BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os11g0167500 Os11g0167500|J090009G24
         (82 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os11g0167500  Protein of unknown function DUF676, hydrolase-...   171   1e-43
Os12g0164800  Protein of unknown function DUF676, hydrolase-...   134   1e-32

>Os11g0167500 Protein of unknown function DUF676, hydrolase-like domain
          containing protein
          Length = 82

 Score =  171 bits (433), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 82/82 (100%), Positives = 82/82 (100%)

Query: 1  MQPFLKNLYTYMSISGPHLGYWYSSNSLFNSGLWLMKRLKGVQCMHQLTFSDEQDPQNTF 60
          MQPFLKNLYTYMSISGPHLGYWYSSNSLFNSGLWLMKRLKGVQCMHQLTFSDEQDPQNTF
Sbjct: 1  MQPFLKNLYTYMSISGPHLGYWYSSNSLFNSGLWLMKRLKGVQCMHQLTFSDEQDPQNTF 60

Query: 61 FYKLCKVDLLYVPSVTKLNYKN 82
          FYKLCKVDLLYVPSVTKLNYKN
Sbjct: 61 FYKLCKVDLLYVPSVTKLNYKN 82



>Os12g0164800 Protein of unknown function DUF676, hydrolase-like domain
          containing protein
          Length = 104

 Score =  134 bits (338), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 60/67 (89%), Positives = 66/67 (98%)

Query: 1  MQPFLKNLYTYMSISGPHLGYWYSSNSLFNSGLWLMKRLKGVQCMHQLTFSDEQDPQNTF 60
          +QP+LKNLYTYMSISGPHLGYWYSSNSLFNSGLWL+K+LKG QC+HQLTFSD+QDPQNTF
Sbjct: 5  LQPYLKNLYTYMSISGPHLGYWYSSNSLFNSGLWLLKKLKGAQCIHQLTFSDDQDPQNTF 64

Query: 61 FYKLCKV 67
          FYKLCKV
Sbjct: 65 FYKLCKV 71



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.323    0.137    0.442 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 2,820,354
Number of extensions: 93319
Number of successful extensions: 127
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 127
Number of HSP's successfully gapped: 2
Length of query: 82
Length of database: 17,035,801
Length adjustment: 52
Effective length of query: 30
Effective length of database: 14,320,673
Effective search space: 429620190
Effective search space used: 429620190
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 149 (62.0 bits)