Os11g0167500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF676, hydrolase-like domain containing protein.
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Os11g0167500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF676, hydrolase-like domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 64.64 | 0.378 | 8.64 | 1.03 | 1.2 | 1.09 | -1.11 | -2.37 | 0.169 | 0.83 | 22.59 | 3650 | -- | -- |
| 67.87 | 0.384 | 8.72 | 0.927 | 1.21 | 2.08 | -1.12 | -- | 0.0644 | 0.767 | 20.33 | 6780 | -- | -- |
| 69.65 | 0.389 | 8.64 | 1.04 | 1.2 | 1.13 | -- | -2.23 | 0.167 | 0.795 | 22.49 | 3540 | -- | -- |
| 71.49 | 0.394 | 8.71 | 1.06 | 1.19 | 2.14 | -- | -- | 0.116 | 0.771 | 20.29 | 7865 | -- | -- |
| 147.39 | 0.569 | 8.7 | 0.546 | -- | 1.52 | -- | -1.77 | 0.0166 | -- | 22.49 | 3540 | -- | -- |
| 104.82 | 0.48 | 8.79 | -0.0228 | 1.15 | -- | -0.943 | -- | -0.24 | 0.815 | -- | -- | -- | -- |
| 108.58 | 0.488 | 8.78 | 0.0123 | 1.15 | -- | -- | -- | -0.235 | 0.789 | -- | -- | -- | -- |
| 151.71 | 0.576 | 8.72 | 0.384 | -- | 1.79 | -- | -- | -0.0103 | -- | 22.49 | 3540 | -- | -- |
| 88.03 | 0.437 | 8.72 | -- | 1.17 | 1.29 | -- | -- | -0.0432 | 0.868 | 19 | 7801 | -- | -- |
| 191.53 | 0.647 | 8.76 | 0.0542 | -- | -- | -- | -- | -0.214 | -- | -- | -- | -- | -- |
| 108.59 | 0.487 | 8.78 | -- | 1.15 | -- | -- | -- | -0.236 | 0.789 | -- | -- | -- | -- |
| 155.34 | 0.582 | 8.73 | -- | -- | 1.65 | -- | -- | -0.066 | -- | 22.49 | 3540 | -- | -- |
| 191.61 | 0.646 | 8.77 | -- | -- | -- | -- | -- | -0.22 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 56.37 | temperature | 20 | 720 | < th | dose independent | sin | 5 | NA |
| 2 | 56.69 | temperature | 20 | 720 | > th | dose independent | sin | 5 | NA |
| 3 | 56.71 | temperature | 20 | 720 | < th | dose independent | rect. | 23 | 16 |
| 4 | 56.74 | temperature | 20 | 720 | > th | dose independent | rect. | 1 | 14 |
| 6 | 56.84 | temperature | 20 | 720 | > th | dose independent | rect. | 1 | 12 |
| 7 | 56.94 | temperature | 20 | 720 | > th | dose independent | rect. | 23 | 14 |
| 12 | 57.13 | temperature | 20 | 720 | > th | dose independent | rect. | 23 | 16 |
| 27 | 57.52 | temperature | 25 | 720 | < th | dose dependent | sin | 5 | NA |
| 38 | 57.88 | temperature | 20 | 720 | > th | dose independent | rect. | 3 | 10 |
| 46 | 58.07 | temperature | 25 | 720 | < th | dose dependent | rect. | 23 | 15 |
| 56 | 58.37 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 14 |
| 57 | 58.38 | temperature | 15 | 720 | > th | dose dependent | rect. | 21 | 16 |
| 63 | 58.46 | temperature | 15 | 720 | > th | dose dependent | sin | 6 | NA |
| 88 | 58.88 | temperature | 20 | 720 | < th | dose independent | rect. | 3 | 8 |
| 89 | 58.89 | temperature | 25 | 720 | < th | dose dependent | rect. | 1 | 13 |
| 96 | 58.97 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 7 |
| 170 | 60.15 | temperature | 15 | 720 | > th | dose dependent | rect. | 1 | 10 |
| 481 | 63.86 | temperature | 25 | 720 | < th | dose dependent | rect. | 7 | 2 |
| 616 | 65.29 | wind | 7 | 43200 | > th | dose dependent | rect. | 21 | 3 |
| 637 | 65.41 | wind | 7 | 43200 | > th | dose independent | rect. | 21 | 4 |
| 640 | 65.42 | wind | 7 | 43200 | < th | dose independent | rect. | 21 | 4 |
| 675 | 65.64 | humidity | 90 | 14400 | > th | dose dependent | rect. | 3 | 12 |
| 677 | 65.65 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 3 |
| 685 | 65.68 | humidity | 90 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 711 | 65.80 | humidity | 90 | 14400 | > th | dose dependent | sin | 3 | NA |
| 712 | 65.80 | humidity | 60 | 43200 | < th | dose dependent | rect. | 19 | 3 |
| 714 | 65.81 | humidity | 60 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 727 | 65.88 | humidity | 60 | 43200 | < th | dose independent | rect. | 19 | 4 |
| 735 | 65.91 | wind | 9 | 43200 | > th | dose dependent | rect. | 17 | 14 |
| 741 | 65.93 | wind | 9 | 43200 | > th | dose dependent | rect. | 20 | 7 |
| 755 | 65.98 | temperature | 10 | 4320 | > th | dose dependent | rect. | 9 | 2 |
| 767 | 66.02 | humidity | 60 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 774 | 66.03 | humidity | 90 | 14400 | > th | dose dependent | rect. | 4 | 7 |
| 786 | 66.07 | humidity | 90 | 14400 | > th | dose dependent | rect. | 1 | 19 |
| 812 | 66.15 | temperature | 30 | 4320 | < th | dose dependent | rect. | 9 | 2 |
| 830 | 66.22 | temperature | 10 | 4320 | > th | dose dependent | rect. | 8 | 5 |
| 837 | 66.24 | temperature | 10 | 270 | > th | dose dependent | sin | 2 | NA |
| 910 | 66.41 | humidity | 50 | 43200 | > th | dose independent | rect. | 20 | 7 |
| 918 | 66.42 | wind | 9 | 43200 | > th | dose dependent | rect. | 17 | 10 |
| 938 | 66.45 | wind | 9 | 43200 | > th | dose independent | rect. | 20 | 10 |
| 973 | 66.51 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 23 |